RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 LRP11Q86VZ4 500 aa4.32□□□□□ -1.72
CKAP4-203ENST00000553039 LRRC28Q86X40 367 aaPredicted RBP4.32□□□□□ -1.72
CKAP4-203ENST00000553039 PTOV1Q86YD1 416 aa4.32□□□□□ -1.72
CKAP4-203ENST00000553039 FITM2Q8N6M3 262 aa4.32□□□□□ -1.72
CKAP4-203ENST00000553039 Q8NFD4 153 aa4.32□□□□□ -1.72
CKAP4-203ENST00000553039 SYNPRQ8TBG9 265 aa4.32□□□□□ -1.72
CKAP4-203ENST00000553039 DCAKDQ8WVC6 231 aa4.32□□□□□ -1.72
CKAP4-203ENST00000553039 SELENOMQ8WWX9 145 aa4.32□□□□□ -1.72
CKAP4-203ENST00000553039 DPF1Q92782 380 aa4.32□□□□□ -1.72
CKAP4-203ENST00000553039 EXT2Q93063 718 aa4.32□□□□□ -1.72
CKAP4-203ENST00000553039 NEURL3Q96EH8 262 aa4.32□□□□□ -1.72
CKAP4-203ENST00000553039 PLEKHA8Q96JA3 519 aa4.32□□□□□ -1.72
CKAP4-203ENST00000553039 C3orf30Q96M34 536 aa4.32□□□□□ -1.72
CKAP4-203ENST00000553039 NR1H4Q96RI1 486 aaPredicted RBP4.32□□□□□ -1.72
CKAP4-203ENST00000553039 FMO2Q99518 471 aa4.32□□□□□ -1.72
CKAP4-203ENST00000553039 THUMPD3Q9BV44 507 aaKnown RBP4.32□□□□□ -1.72
CKAP4-203ENST00000553039 FUT8Q9BYC5 575 aa4.32□□□□□ -1.72
CKAP4-203ENST00000553039 GPR61Q9BZJ8 451 aa4.32□□□□□ -1.72
CKAP4-203ENST00000553039 TRIM31Q9BZY9 425 aa4.32□□□□□ -1.72
CKAP4-203ENST00000553039 TSPYL1Q9H0U9 437 aa4.32□□□□□ -1.72
CKAP4-203ENST00000553039 RHOJQ9H4E5 214 aa4.32□□□□□ -1.72
CKAP4-203ENST00000553039 NOL11Q9H8H0 719 aaKnown RBP4.32□□□□□ -1.72
CKAP4-203ENST00000553039 MBNL3Q9NUK0 354 aaKnown RBP4.32□□□□□ -1.72
CKAP4-203ENST00000553039 ACER3Q9NUN7 267 aa4.32□□□□□ -1.72
CKAP4-203ENST00000553039 ZNF446Q9NWS9 450 aa4.32□□□□□ -1.72
CKAP4-203ENST00000553039 TXNDC16Q9P2K2 825 aa4.32□□□□□ -1.72
CKAP4-203ENST00000553039 TBK1Q9UHD2 729 aa4.32□□□□□ -1.72
CKAP4-203ENST00000553039 SNX6Q9UNH7 406 aa4.32□□□□□ -1.72
CKAP4-203ENST00000553039 FAM96BQ9Y3D0 163 aa4.32□□□□□ -1.72
CKAP4-203ENST00000553039 NPTNQ9Y639 398 aa4.32□□□□□ -1.72
CKAP4-203ENST00000553039 WI2-2373I1.2A0A1W2PRP0 233 aa4.31□□□□□ -1.72
CKAP4-203ENST00000553039 GAGE10A6NGK3 116 aa4.31□□□□□ -1.72
CKAP4-203ENST00000553039 A8MXK9 166 aa4.31□□□□□ -1.72
CKAP4-203ENST00000553039 H0YL77 283 aa4.31□□□□□ -1.72
CKAP4-203ENST00000553039 ANGPTL7O43827 346 aa4.31□□□□□ -1.72
CKAP4-203ENST00000553039 PSMG1O95456 288 aa4.31□□□□□ -1.72
CKAP4-203ENST00000553039 LIPFP07098 398 aa4.31□□□□□ -1.72
CKAP4-203ENST00000553039 IL3P08700 152 aa4.31□□□□□ -1.72
CKAP4-203ENST00000553039 IGLL1P15814 213 aa4.31□□□□□ -1.72
CKAP4-203ENST00000553039 MAP3K8P41279 467 aa4.31□□□□□ -1.72
CKAP4-203ENST00000553039 CCR4P51679 360 aa4.31□□□□□ -1.72
CKAP4-203ENST00000553039 ATP12AP54707 1039 aa4.31□□□□□ -1.72
CKAP4-203ENST00000553039 PLTPP55058 493 aa4.31□□□□□ -1.72
CKAP4-203ENST00000553039 KLF3P57682 345 aaPredicted RBP4.31□□□□□ -1.72
CKAP4-203ENST00000553039 GNB2P62879 340 aa4.31□□□□□ -1.72
CKAP4-203ENST00000553039 C2orf80Q0P641 193 aa4.31□□□□□ -1.72
CKAP4-203ENST00000553039 SF3A3Q12874 501 aaKnown RBP eCLIP4.31□□□□□ -1.72
CKAP4-203ENST00000553039 NSUN5P1Q3KNT7 163 aa4.31□□□□□ -1.72
CKAP4-203ENST00000553039 HSP90B2PQ58FF3 399 aa4.31□□□□□ -1.72
CKAP4-203ENST00000553039 CLEC6AQ6EIG7 209 aa4.31□□□□□ -1.72
CKAP4-203ENST00000553039 SLC35E4Q6ICL7 350 aa4.31□□□□□ -1.72
CKAP4-203ENST00000553039 UNQ9370/PRO34162Q6UXP9 181 aa4.31□□□□□ -1.72
CKAP4-203ENST00000553039 BRD3OSQ6XYD6 125 aa4.31□□□□□ -1.72
CKAP4-203ENST00000553039 ZNF771Q7L3S4 317 aaPredicted RBP4.31□□□□□ -1.72
CKAP4-203ENST00000553039 SZRD1Q7Z422 152 aa4.31□□□□□ -1.72
CKAP4-203ENST00000553039 SNX32Q86XE0 403 aa4.31□□□□□ -1.72
CKAP4-203ENST00000553039 PDIK1LQ8N165 341 aa4.31□□□□□ -1.72
CKAP4-203ENST00000553039 MREGQ8N565 214 aa4.31□□□□□ -1.72
CKAP4-203ENST00000553039 C1orf52Q8N6N3 182 aaKnown RBP4.31□□□□□ -1.72
CKAP4-203ENST00000553039 COX18Q8N8Q8 333 aa4.31□□□□□ -1.72
CKAP4-203ENST00000553039 NAT8LQ8N9F0 302 aa4.31□□□□□ -1.72
CKAP4-203ENST00000553039 SDR9C7Q8NEX9 313 aa4.31□□□□□ -1.72
CKAP4-203ENST00000553039 ZNF563Q8TA94 476 aa4.31□□□□□ -1.72
CKAP4-203ENST00000553039 RHEBL1Q8TAI7 183 aa4.31□□□□□ -1.72
CKAP4-203ENST00000553039 METTL6Q8TCB7 284 aa4.31□□□□□ -1.72
CKAP4-203ENST00000553039 C16orf78Q8WTQ4 265 aa4.31□□□□□ -1.72
CKAP4-203ENST00000553039 DDIT4LQ96D03 193 aa4.31□□□□□ -1.72
CKAP4-203ENST00000553039 CHMP6Q96FZ7 201 aa4.31□□□□□ -1.72
CKAP4-203ENST00000553039 PKNOX2Q96KN3 472 aa4.31□□□□□ -1.72
CKAP4-203ENST00000553039 MAGEB18Q96M61 343 aa4.31□□□□□ -1.72
CKAP4-203ENST00000553039 DCLRE1CQ96SD1 692 aaKnown RBP4.31□□□□□ -1.72
CKAP4-203ENST00000553039 LINC00470Q9BZP3 86 aa4.31□□□□□ -1.72
CKAP4-203ENST00000553039 ALG9Q9H6U8 611 aa4.31□□□□□ -1.72
CKAP4-203ENST00000553039 MED4Q9NPJ6 270 aa4.31□□□□□ -1.72
CKAP4-203ENST00000553039 EQTNQ9NQ60 294 aa4.31□□□□□ -1.72
CKAP4-203ENST00000553039 MIEF1Q9NQG6 463 aa4.31□□□□□ -1.72
CKAP4-203ENST00000553039 CYSLTR2Q9NS75 346 aa4.31□□□□□ -1.72
CKAP4-203ENST00000553039 GIN1Q9NXP7 522 aa4.31□□□□□ -1.72
CKAP4-203ENST00000553039 CHRNA9Q9UGM1 479 aa4.31□□□□□ -1.72
CKAP4-203ENST00000553039 SLC7A8Q9UHI5 535 aa4.31□□□□□ -1.72
CKAP4-203ENST00000553039 RPS6KA6Q9UK32 745 aa4.31□□□□□ -1.72
CKAP4-203ENST00000553039 PCDHGB4Q9UN71 923 aa4.31□□□□□ -1.72
CKAP4-203ENST00000553039 SNX24Q9Y343 169 aa4.31□□□□□ -1.72
CKAP4-203ENST00000553039 CAB39Q9Y376 341 aaPredicted RBP4.31□□□□□ -1.72
CKAP4-203ENST00000553039 TRAV40A0A0B4J280 105 aa4.3□□□□□ -1.72
CKAP4-203ENST00000553039 PLSCR5A0PG75 271 aa4.3□□□□□ -1.72
CKAP4-203ENST00000553039 RPL36A-HNRNPH2H7BZ11 118 aa4.3□□□□□ -1.72
CKAP4-203ENST00000553039 UBXN8O00124 270 aa4.3□□□□□ -1.72
CKAP4-203ENST00000553039 P2RY10O00398 339 aa4.3□□□□□ -1.72
CKAP4-203ENST00000553039 UBE2CO00762 179 aa4.3□□□□□ -1.72
CKAP4-203ENST00000553039 TSPAN4O14817 238 aa4.3□□□□□ -1.72
CKAP4-203ENST00000553039 MGRN1O60291 552 aa4.3□□□□□ -1.72
CKAP4-203ENST00000553039 TRIM13O60858 407 aa4.3□□□□□ -1.72
CKAP4-203ENST00000553039 JTBO76095 146 aa4.3□□□□□ -1.72
CKAP4-203ENST00000553039 RAB36O95755 333 aa4.3□□□□□ -1.72
CKAP4-203ENST00000553039 WNT2P09544 360 aa4.3□□□□□ -1.72
CKAP4-203ENST00000553039 CD79AP11912 226 aa4.3□□□□□ -1.72
CKAP4-203ENST00000553039 BCKDHAP12694 445 aa4.3□□□□□ -1.72
CKAP4-203ENST00000553039 ZNF250P15622 560 aa4.3□□□□□ -1.72
CKAP4-203ENST00000553039 CRABP2P29373 138 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms