RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 ZNF248Q8NDW4 579 aa10.31□□□□□ -0.76
RAB5C-208ENST00000551338 SLC26A10Q8NG04 563 aa10.31□□□□□ -0.76
RAB5C-208ENST00000551338 OR2G2Q8NGZ5 317 aa10.31□□□□□ -0.76
RAB5C-208ENST00000551338 TRMT10AQ8TBZ6 339 aaKnown RBP10.31□□□□□ -0.76
RAB5C-208ENST00000551338 SLC25A43Q8WUT9 341 aaPredicted RBP10.31□□□□□ -0.76
RAB5C-208ENST00000551338 ZBTB8AQ96BR9 441 aa10.31□□□□□ -0.76
RAB5C-208ENST00000551338 TXNDC15Q96J42 360 aa10.31□□□□□ -0.76
RAB5C-208ENST00000551338 C4orf45Q96LM5 186 aa10.31□□□□□ -0.76
RAB5C-208ENST00000551338 DERL3Q96Q80 235 aa10.31□□□□□ -0.76
RAB5C-208ENST00000551338 SMAD5Q99717 465 aaKnown RBP10.31□□□□□ -0.76
RAB5C-208ENST00000551338 EDEM2Q9BV94 578 aa10.31□□□□□ -0.76
RAB5C-208ENST00000551338 TMEM185BQ9H7F4 350 aa10.31□□□□□ -0.76
RAB5C-208ENST00000551338 PTGES2Q9H7Z7 377 aa10.31□□□□□ -0.76
RAB5C-208ENST00000551338 MED29Q9NX70 200 aa10.31□□□□□ -0.76
RAB5C-208ENST00000551338 FRRS1LQ9P0K9 344 aa10.31□□□□□ -0.76
RAB5C-208ENST00000551338 B3GALT5Q9Y2C3 310 aa10.31□□□□□ -0.76
RAB5C-208ENST00000551338 A0A087WZY1 265 aa10.3□□□□□ -0.76
RAB5C-208ENST00000551338 CCDC187A0A096LP49 1063 aa10.3□□□□□ -0.76
RAB5C-208ENST00000551338 ZNF814B7Z6K7 855 aa10.3□□□□□ -0.76
RAB5C-208ENST00000551338 TRAF3IP2O43734 574 aaPredicted RBP10.3□□□□□ -0.76
RAB5C-208ENST00000551338 KHDRBS3O75525 346 aaKnown RBP10.3□□□□□ -0.76
RAB5C-208ENST00000551338 HLA-DQA2P01906 255 aa10.3□□□□□ -0.76
RAB5C-208ENST00000551338 OPN1LWP04000 364 aa10.3□□□□□ -0.76
RAB5C-208ENST00000551338 HNRNPCP07910 306 aaKnown RBP eCLIP10.3□□□□□ -0.76
RAB5C-208ENST00000551338 ZNF806P0C7X5 589 aa10.3□□□□□ -0.76
RAB5C-208ENST00000551338 LIFP15018 202 aa10.3□□□□□ -0.76
RAB5C-208ENST00000551338 ATF1P18846 271 aa10.3□□□□□ -0.76
RAB5C-208ENST00000551338 RANBP1P43487 201 aa10.3□□□□□ -0.76
RAB5C-208ENST00000551338 RFX2P48378 723 aa10.3□□□□□ -0.76
RAB5C-208ENST00000551338 BIDP55957 195 aa10.3□□□□□ -0.76
RAB5C-208ENST00000551338 OR2B6P58173 313 aa10.3□□□□□ -0.76
RAB5C-208ENST00000551338 ADAM8P78325 824 aa10.3□□□□□ -0.76
RAB5C-208ENST00000551338 ASAH1Q13510 395 aa10.3□□□□□ -0.76
RAB5C-208ENST00000551338 TAB1Q15750 504 aa10.3□□□□□ -0.76
RAB5C-208ENST00000551338 WDR38Q5JTN6 314 aa10.3□□□□□ -0.76
RAB5C-208ENST00000551338 FDX2Q6P4F2 183 aa10.3□□□□□ -0.76
RAB5C-208ENST00000551338 LRRN1Q6UXK5 716 aa10.3□□□□□ -0.76
RAB5C-208ENST00000551338 SPATC1Q76KD6 591 aa10.3□□□□□ -0.76
RAB5C-208ENST00000551338 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.3□□□□□ -0.76
RAB5C-208ENST00000551338 LRRC28Q86X40 367 aaPredicted RBP10.3□□□□□ -0.76
RAB5C-208ENST00000551338 PRSS35Q8N3Z0 413 aa10.3□□□□□ -0.76
RAB5C-208ENST00000551338 GTPBP8Q8N3Z3 284 aaPredicted RBP10.3□□□□□ -0.76
RAB5C-208ENST00000551338 CELF2-AS1Q8N7Q2 184 aa10.3□□□□□ -0.76
RAB5C-208ENST00000551338 DRAXINQ8NBI3 349 aaPredicted RBP10.3□□□□□ -0.76
RAB5C-208ENST00000551338 OR4M1Q8NGD0 313 aa10.3□□□□□ -0.76
RAB5C-208ENST00000551338 OR5H6Q8NGV6 325 aa10.3□□□□□ -0.76
RAB5C-208ENST00000551338 ASB17Q8WXJ9 295 aa10.3□□□□□ -0.76
RAB5C-208ENST00000551338 NSMAFQ92636 917 aa10.3□□□□□ -0.76
RAB5C-208ENST00000551338 TMEM41AQ96HV5 264 aa10.3□□□□□ -0.76
RAB5C-208ENST00000551338 OR5B2Q96R09 309 aa10.3□□□□□ -0.76
RAB5C-208ENST00000551338 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.3□□□□□ -0.76
RAB5C-208ENST00000551338 SLC25A18Q9H1K4 315 aa10.3□□□□□ -0.76
RAB5C-208ENST00000551338 ELOVL3Q9HB03 270 aa10.3□□□□□ -0.76
RAB5C-208ENST00000551338 CYSLTR2Q9NS75 346 aa10.3□□□□□ -0.76
RAB5C-208ENST00000551338 HPF1Q9NWY4 346 aa10.3□□□□□ -0.76
RAB5C-208ENST00000551338 ANKRD10Q9NXR5 420 aa10.3□□□□□ -0.76
RAB5C-208ENST00000551338 FOXJ2Q9P0K8 574 aa10.3□□□□□ -0.76
RAB5C-208ENST00000551338 EXTL2Q9UBQ6 330 aa10.3□□□□□ -0.76
RAB5C-208ENST00000551338 FARSAQ9Y285 508 aaKnown RBP10.3□□□□□ -0.76
RAB5C-208ENST00000551338 RPH3AQ9Y2J0 694 aaPredicted RBP10.3□□□□□ -0.76
RAB5C-208ENST00000551338 AK6Q9Y3D8 172 aaKnown RBP10.3□□□□□ -0.76
RAB5C-208ENST00000551338 TRBV5-7A0A0A0MS05 114 aa10.29□□□□□ -0.76
RAB5C-208ENST00000551338 A0A0B4J203 849 aa10.29□□□□□ -0.76
RAB5C-208ENST00000551338 G3V3Y1 287 aa10.29□□□□□ -0.76
RAB5C-208ENST00000551338 RAMP1O60894 148 aa10.29□□□□□ -0.76
RAB5C-208ENST00000551338 ZNF254O75437 659 aa10.29□□□□□ -0.76
RAB5C-208ENST00000551338 MPZL1O95297 269 aa10.29□□□□□ -0.76
RAB5C-208ENST00000551338 MT-CO3P00414 261 aa10.29□□□□□ -0.76
RAB5C-208ENST00000551338 PAHP00439 452 aa10.29□□□□□ -0.76
RAB5C-208ENST00000551338 APOA1P02647 267 aa10.29□□□□□ -0.76
RAB5C-208ENST00000551338 EPXP11678 715 aa10.29□□□□□ -0.76
RAB5C-208ENST00000551338 SNRPBP14678 240 aaKnown RBP10.29□□□□□ -0.76
RAB5C-208ENST00000551338 KLK2P20151 261 aa10.29□□□□□ -0.76
RAB5C-208ENST00000551338 SFTPDP35247 375 aa10.29□□□□□ -0.76
RAB5C-208ENST00000551338 EIF1P41567 113 aaKnown RBP10.29□□□□□ -0.76
RAB5C-208ENST00000551338 ROM1Q03395 351 aa10.29□□□□□ -0.76
RAB5C-208ENST00000551338 SCN1BQ07699 218 aa10.29□□□□□ -0.76
RAB5C-208ENST00000551338 IL18Q14116 193 aa10.29□□□□□ -0.76
RAB5C-208ENST00000551338 EIF2B1Q14232 305 aaKnown RBP10.29□□□□□ -0.76
RAB5C-208ENST00000551338 SSPNQ14714 243 aa10.29□□□□□ -0.76
RAB5C-208ENST00000551338 Q499Y3 187 aa10.29□□□□□ -0.76
RAB5C-208ENST00000551338 SLC22A10Q63ZE4 541 aa10.29□□□□□ -0.76
RAB5C-208ENST00000551338 B3GNTL1Q67FW5 361 aaPredicted RBP10.29□□□□□ -0.76
RAB5C-208ENST00000551338 SLC18B1Q6NT16 456 aa10.29□□□□□ -0.76
RAB5C-208ENST00000551338 H3F3CQ6NXT2 135 aa10.29□□□□□ -0.76
RAB5C-208ENST00000551338 NRARPQ7Z6K4 114 aa10.29□□□□□ -0.76
RAB5C-208ENST00000551338 ZNF679Q8IYX0 411 aa10.29□□□□□ -0.76
RAB5C-208ENST00000551338 TMEM156Q8N614 296 aa10.29□□□□□ -0.76
RAB5C-208ENST00000551338 SAMD12Q8N8I0 201 aa10.29□□□□□ -0.76
RAB5C-208ENST00000551338 NOXO1Q8NFA2 376 aa10.29□□□□□ -0.76
RAB5C-208ENST00000551338 OR10AC1Q8NH08 325 aa10.29□□□□□ -0.76
RAB5C-208ENST00000551338 OR52N5Q8NH56 324 aa10.29□□□□□ -0.76
RAB5C-208ENST00000551338 OR5AK2Q8NH90 309 aa10.29□□□□□ -0.76
RAB5C-208ENST00000551338 RNF128Q8TEB7 428 aa10.29□□□□□ -0.76
RAB5C-208ENST00000551338 DCBLD2Q96PD2 775 aa10.29□□□□□ -0.76
RAB5C-208ENST00000551338 NEDD4LQ96PU5 975 aa10.29□□□□□ -0.76
RAB5C-208ENST00000551338 ABHD6Q9BV23 337 aa10.29□□□□□ -0.76
RAB5C-208ENST00000551338 EMC6Q9BV81 110 aa10.29□□□□□ -0.76
RAB5C-208ENST00000551338 TMEM9BQ9NQ34 198 aa10.29□□□□□ -0.76
RAB5C-208ENST00000551338 RYDENQ9NUL5 291 aaKnown RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms