RNA–Protein interactions for RNA: ENST00000550872.1

CHMP1A-209, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-209ENST00000550872 B4GALT1P15291 398 aa14.2□□□□□ -0.14
CHMP1A-209ENST00000550872 ZNF83P51522 516 aa14.2□□□□□ -0.14
CHMP1A-209ENST00000550872 ZNF133P52736 654 aaPredicted RBP14.2□□□□□ -0.14
CHMP1A-209ENST00000550872 TUBA1BP68363 451 aa14.2□□□□□ -0.14
CHMP1A-209ENST00000550872 TUBA4AP68366 448 aa14.2□□□□□ -0.14
CHMP1A-209ENST00000550872 SLC36A3Q495N2 470 aa14.2□□□□□ -0.14
CHMP1A-209ENST00000550872 SLC35F1Q5T1Q4 408 aa14.2□□□□□ -0.14
CHMP1A-209ENST00000550872 C10orf128Q5T292 105 aa14.2□□□□□ -0.14
CHMP1A-209ENST00000550872 C1QTNF12Q5T7M4 302 aa14.2□□□□□ -0.14
CHMP1A-209ENST00000550872 SLC25A47Q6Q0C1 308 aa14.2□□□□□ -0.14
CHMP1A-209ENST00000550872 TUBA1AQ71U36 451 aa14.2□□□□□ -0.14
CHMP1A-209ENST00000550872 ZNF627Q7L945 461 aa14.2□□□□□ -0.14
CHMP1A-209ENST00000550872 JAZF1Q86VZ6 243 aa14.2□□□□□ -0.14
CHMP1A-209ENST00000550872 ZDHHC13Q8IUH4 622 aa14.2□□□□□ -0.14
CHMP1A-209ENST00000550872 OR8D4Q8NGM9 314 aa14.2□□□□□ -0.14
CHMP1A-209ENST00000550872 PKP2Q99959 881 aa14.2□□□□□ -0.14
CHMP1A-209ENST00000550872 SMURF2Q9HAU4 748 aa14.2□□□□□ -0.14
CHMP1A-209ENST00000550872 S100A14Q9HCY8 104 aa14.2□□□□□ -0.14
CHMP1A-209ENST00000550872 RASSF1Q9NS23 344 aa14.2□□□□□ -0.14
CHMP1A-209ENST00000550872 KIF17Q9P2E2 1029 aa14.2□□□□□ -0.14
CHMP1A-209ENST00000550872 REV1Q9UBZ9 1251 aa14.2□□□□□ -0.14
CHMP1A-209ENST00000550872 CADP27708 2225 aa14.2□□□□□ -0.14
CHMP1A-209ENST00000550872 ROS1P08922 2347 aa14.19□□□□□ -0.14
CHMP1A-209ENST00000550872 ARPC4-TTLL3A0A0A6YYG9 625 aa14.19□□□□□ -0.14
CHMP1A-209ENST00000550872 IGKV1D-43A0A0B4J1Z2 117 aa14.19□□□□□ -0.14
CHMP1A-209ENST00000550872 FAM221AA4D161 298 aa14.19□□□□□ -0.14
CHMP1A-209ENST00000550872 H3BN98 237 aa14.19□□□□□ -0.14
CHMP1A-209ENST00000550872 HRGP04196 525 aa14.19□□□□□ -0.14
CHMP1A-209ENST00000550872 TP53P04637 393 aaPredicted RBP14.19□□□□□ -0.14
CHMP1A-209ENST00000550872 POU1F1P28069 291 aa14.19□□□□□ -0.14
CHMP1A-209ENST00000550872 CDKN2AP42771 156 aaKnown RBP14.19□□□□□ -0.14
CHMP1A-209ENST00000550872 CAPZA2P47755 286 aa14.19□□□□□ -0.14
CHMP1A-209ENST00000550872 PTCHD4Q6ZW05 846 aa14.19□□□□□ -0.14
CHMP1A-209ENST00000550872 ADCK1Q86TW2 530 aa14.19□□□□□ -0.14
CHMP1A-209ENST00000550872 CCDC36Q8IYA8 594 aa14.19□□□□□ -0.14
CHMP1A-209ENST00000550872 SVOPLQ8N434 492 aa14.19□□□□□ -0.14
CHMP1A-209ENST00000550872 ICA1LQ8NDH6 482 aa14.19□□□□□ -0.14
CHMP1A-209ENST00000550872 OR4K13Q8NH42 304 aa14.19□□□□□ -0.14
CHMP1A-209ENST00000550872 TEX47Q8TBZ9 253 aa14.19□□□□□ -0.14
CHMP1A-209ENST00000550872 PLPPR2Q96GM1 343 aa14.19□□□□□ -0.14
CHMP1A-209ENST00000550872 TMEM38BQ9NVV0 291 aa14.19□□□□□ -0.14
CHMP1A-209ENST00000550872 SAC3D1A6NKF1 404 aa14.18□□□□□ -0.14
CHMP1A-209ENST00000550872 M0R1B8 84 aa14.18□□□□□ -0.14
CHMP1A-209ENST00000550872 BHLHE40O14503 412 aa14.18□□□□□ -0.14
CHMP1A-209ENST00000550872 FARS2O95363 451 aaKnown RBP14.18□□□□□ -0.14
CHMP1A-209ENST00000550872 RENP00797 406 aa14.18□□□□□ -0.14
CHMP1A-209ENST00000550872 OR8G3PP0DMU2 310 aa14.18□□□□□ -0.14
CHMP1A-209ENST00000550872 OSMP13725 252 aa14.18□□□□□ -0.14
CHMP1A-209ENST00000550872 HIST1H1CP16403 213 aaKnown RBP14.18□□□□□ -0.14
CHMP1A-209ENST00000550872 GUCA1AP43080 201 aaPredicted RBP14.18□□□□□ -0.14
CHMP1A-209ENST00000550872 DAPP51397 102 aa14.18□□□□□ -0.14
CHMP1A-209ENST00000550872 NR1H2P55055 460 aa14.18□□□□□ -0.14
CHMP1A-209ENST00000550872 SGCAQ16586 387 aa14.18□□□□□ -0.14
CHMP1A-209ENST00000550872 NCMAPQ5T1S8 102 aa14.18□□□□□ -0.14
CHMP1A-209ENST00000550872 FAHD1Q6P587 224 aa14.18□□□□□ -0.14
CHMP1A-209ENST00000550872 LEG1Q6P5S2 330 aa14.18□□□□□ -0.14
CHMP1A-209ENST00000550872 SEZ6L2Q6UXD5 910 aa14.18□□□□□ -0.14
CHMP1A-209ENST00000550872 SLC22A24Q8N4F4 322 aa14.18□□□□□ -0.14
CHMP1A-209ENST00000550872 OR2T33Q8NG76 320 aa14.18□□□□□ -0.14
CHMP1A-209ENST00000550872 DNAJC9Q8WXX5 260 aa14.18□□□□□ -0.14
CHMP1A-209ENST00000550872 HTRA1Q92743 480 aa14.18□□□□□ -0.14
CHMP1A-209ENST00000550872 STMN2Q93045 179 aa14.18□□□□□ -0.14
CHMP1A-209ENST00000550872 SYT4Q9H2B2 425 aa14.18□□□□□ -0.14
CHMP1A-209ENST00000550872 CLEC4MQ9H2X3 399 aaPredicted RBP14.18□□□□□ -0.14
CHMP1A-209ENST00000550872 RERGLQ9H628 205 aa14.18□□□□□ -0.14
CHMP1A-209ENST00000550872 ESRP2Q9H6T0 727 aaKnown RBP14.18□□□□□ -0.14
CHMP1A-209ENST00000550872 NPAP1Q9NZP6 1156 aa14.18□□□□□ -0.14
CHMP1A-209ENST00000550872 VSX1Q9NZR4 365 aaPredicted RBP14.18□□□□□ -0.14
CHMP1A-209ENST00000550872 BAIAP2Q9UQB8 552 aa14.18□□□□□ -0.14
CHMP1A-209ENST00000550872 HEATR1Q9H583 2144 aaKnown RBP14.18□□□□□ -0.14
CHMP1A-209ENST00000550872 AKAP6Q13023 2319 aa14.18□□□□□ -0.14
CHMP1A-209ENST00000550872 DPRXA6NFQ7 191 aa14.17□□□□□ -0.14
CHMP1A-209ENST00000550872 SLC16A7O60669 478 aa14.17□□□□□ -0.14
CHMP1A-209ENST00000550872 HLA-HP01893 362 aa14.17□□□□□ -0.14
CHMP1A-209ENST00000550872 CD79AP11912 226 aa14.17□□□□□ -0.14
CHMP1A-209ENST00000550872 PAX7P23759 505 aa14.17□□□□□ -0.14
CHMP1A-209ENST00000550872 CDAP32320 146 aa14.17□□□□□ -0.14
CHMP1A-209ENST00000550872 SKA3Q8IX90 412 aa14.17□□□□□ -0.14
CHMP1A-209ENST00000550872 LNX2Q8N448 690 aa14.17□□□□□ -0.14
CHMP1A-209ENST00000550872 OR52E2Q8NGJ4 325 aa14.17□□□□□ -0.14
CHMP1A-209ENST00000550872 OR4Q3Q8NH05 313 aa14.17□□□□□ -0.14
CHMP1A-209ENST00000550872 NANOS1Q8WY41 292 aaKnown RBP14.17□□□□□ -0.14
CHMP1A-209ENST00000550872 HS3ST6Q96QI5 342 aa14.17□□□□□ -0.14
CHMP1A-209ENST00000550872 NMNAT3Q96T66 252 aa14.17□□□□□ -0.14
CHMP1A-209ENST00000550872 SH3GL3Q99963 347 aa14.17□□□□□ -0.14
CHMP1A-209ENST00000550872 SEC61A2Q9H9S3 476 aa14.17□□□□□ -0.14
CHMP1A-209ENST00000550872 PAPOLBQ9NRJ5 636 aaKnown RBP14.17□□□□□ -0.14
CHMP1A-209ENST00000550872 OAZ3Q9UMX2 235 aa14.17□□□□□ -0.14
CHMP1A-209ENST00000550872 UGT2A1Q9Y4X1 527 aa14.17□□□□□ -0.14
CHMP1A-209ENST00000550872 SPG11Q96JI7 2443 aa14.16□□□□□ -0.14
CHMP1A-209ENST00000550872 A0A1W2PPL8 197 aa14.16□□□□□ -0.14
CHMP1A-209ENST00000550872 KHDRBS3O75525 346 aaKnown RBP14.16□□□□□ -0.14
CHMP1A-209ENST00000550872 CD3EP07766 207 aa14.16□□□□□ -0.14
CHMP1A-209ENST00000550872 CBR1P16152 277 aa14.16□□□□□ -0.14
CHMP1A-209ENST00000550872 CTLA4P16410 223 aa14.16□□□□□ -0.14
CHMP1A-209ENST00000550872 NPR2P20594 1047 aa14.16□□□□□ -0.14
CHMP1A-209ENST00000550872 LOXP28300 417 aaPredicted RBP14.16□□□□□ -0.14
CHMP1A-209ENST00000550872 CRABP1P29762 137 aa14.16□□□□□ -0.14
CHMP1A-209ENST00000550872 MRPS34P82930 218 aaKnown RBP14.16□□□□□ -0.14
CHMP1A-209ENST00000550872 PIGFQ07326 219 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms