RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 RP2O75695 350 aa14.89□□□□□ -0.03
CHMP1A-205ENST00000548650 VIMP08670 466 aaKnown RBP14.89□□□□□ -0.03
CHMP1A-205ENST00000548650 MMP7P09237 267 aaPredicted RBP14.89□□□□□ -0.03
CHMP1A-205ENST00000548650 COL8A2P25067 703 aa14.89□□□□□ -0.03
CHMP1A-205ENST00000548650 AQP2P41181 271 aa14.89□□□□□ -0.03
CHMP1A-205ENST00000548650 GPR6P46095 362 aaPredicted RBP14.89□□□□□ -0.03
CHMP1A-205ENST00000548650 DAP3P51398 398 aaKnown RBP14.89□□□□□ -0.03
CHMP1A-205ENST00000548650 DVL1P1P54792 670 aaPredicted RBP14.89□□□□□ -0.03
CHMP1A-205ENST00000548650 ERVS71-1P61550 626 aa14.89□□□□□ -0.03
CHMP1A-205ENST00000548650 MRPS11P82912 194 aaKnown RBP14.89□□□□□ -0.03
CHMP1A-205ENST00000548650 PIN1Q13526 163 aaPredicted RBP14.89□□□□□ -0.03
CHMP1A-205ENST00000548650 C10orf128Q5T292 105 aa14.89□□□□□ -0.03
CHMP1A-205ENST00000548650 TMEM53Q6P2H8 277 aa14.89□□□□□ -0.03
CHMP1A-205ENST00000548650 SLC16A14Q7RTX9 510 aa14.89□□□□□ -0.03
CHMP1A-205ENST00000548650 HDDC2Q7Z4H3 204 aa14.89□□□□□ -0.03
CHMP1A-205ENST00000548650 SYT14Q8NB59 555 aa14.89□□□□□ -0.03
CHMP1A-205ENST00000548650 MOSPD2Q8NHP6 518 aa14.89□□□□□ -0.03
CHMP1A-205ENST00000548650 NMD3Q96D46 503 aaKnown RBP14.89□□□□□ -0.03
CHMP1A-205ENST00000548650 SGTBQ96EQ0 304 aa14.89□□□□□ -0.03
CHMP1A-205ENST00000548650 TSPAN32Q96QS1 320 aa14.89□□□□□ -0.03
CHMP1A-205ENST00000548650 SH3GL1Q99961 368 aa14.89□□□□□ -0.03
CHMP1A-205ENST00000548650 OR51B6Q9H340 312 aa14.89□□□□□ -0.03
CHMP1A-205ENST00000548650 CDH20Q9HBT6 801 aa14.89□□□□□ -0.03
CHMP1A-205ENST00000548650 ZNF275Q9NSD4 429 aaPredicted RBP14.89□□□□□ -0.03
CHMP1A-205ENST00000548650 TMEFF2Q9UIK5 374 aaPredicted RBP14.89□□□□□ -0.03
CHMP1A-205ENST00000548650 SLC22A23A1A5C7 686 aa14.88□□□□□ -0.03
CHMP1A-205ENST00000548650 NPIPB13A6NJU9 1138 aa14.88□□□□□ -0.03
CHMP1A-205ENST00000548650 BBIP1A8MTZ0 92 aa14.88□□□□□ -0.03
CHMP1A-205ENST00000548650 NPIPB4C9JG80 1138 aa14.88□□□□□ -0.03
CHMP1A-205ENST00000548650 MRASO14807 208 aa14.88□□□□□ -0.03
CHMP1A-205ENST00000548650 WNT9BO14905 357 aa14.88□□□□□ -0.03
CHMP1A-205ENST00000548650 SASH3O75995 380 aa14.88□□□□□ -0.03
CHMP1A-205ENST00000548650 SLC2A10O95528 541 aa14.88□□□□□ -0.03
CHMP1A-205ENST00000548650 CLPTM1O96005 669 aa14.88□□□□□ -0.03
CHMP1A-205ENST00000548650 SAGP10523 405 aaPredicted RBP14.88□□□□□ -0.03
CHMP1A-205ENST00000548650 ZNF250P15622 560 aa14.88□□□□□ -0.03
CHMP1A-205ENST00000548650 ACADSP16219 412 aa14.88□□□□□ -0.03
CHMP1A-205ENST00000548650 FUT1P19526 365 aa14.88□□□□□ -0.03
CHMP1A-205ENST00000548650 MAGEB1P43366 347 aa14.88□□□□□ -0.03
CHMP1A-205ENST00000548650 OR1E2P47887 323 aa14.88□□□□□ -0.03
CHMP1A-205ENST00000548650 ZNF84P51523 738 aa14.88□□□□□ -0.03
CHMP1A-205ENST00000548650 KLF3P57682 345 aaPredicted RBP14.88□□□□□ -0.03
CHMP1A-205ENST00000548650 NKPD1Q17RQ9 610 aa14.88□□□□□ -0.03
CHMP1A-205ENST00000548650 TBC1D28Q2M2D7 210 aa14.88□□□□□ -0.03
CHMP1A-205ENST00000548650 ALKBH6Q3KRA9 238 aa14.88□□□□□ -0.03
CHMP1A-205ENST00000548650 ARMC4Q5T2S8 1044 aa14.88□□□□□ -0.03
CHMP1A-205ENST00000548650 ERICH5Q6P6B1 374 aa14.88□□□□□ -0.03
CHMP1A-205ENST00000548650 UGT2A3Q6UWM9 527 aa14.88□□□□□ -0.03
CHMP1A-205ENST00000548650 RINLQ6ZS11 566 aa14.88□□□□□ -0.03
CHMP1A-205ENST00000548650 RBM15BQ8NDT2 890 aaKnown RBP14.88□□□□□ -0.03
CHMP1A-205ENST00000548650 TMEM239Q8WW34 195 aa14.88□□□□□ -0.03
CHMP1A-205ENST00000548650 LIPHQ8WWY8 451 aa14.88□□□□□ -0.03
CHMP1A-205ENST00000548650 NABP1Q96AH0 204 aa14.88□□□□□ -0.03
CHMP1A-205ENST00000548650 ZNF583Q96ND8 569 aa14.88□□□□□ -0.03
CHMP1A-205ENST00000548650 ECSITQ9BQ95 431 aa14.88□□□□□ -0.03
CHMP1A-205ENST00000548650 NARFLQ9H6Q4 476 aa14.88□□□□□ -0.03
CHMP1A-205ENST00000548650 RNF121Q9H920 327 aa14.88□□□□□ -0.03
CHMP1A-205ENST00000548650 INIPQ9NRY2 104 aa14.88□□□□□ -0.03
CHMP1A-205ENST00000548650 RIMS3Q9UJD0 308 aa14.88□□□□□ -0.03
CHMP1A-205ENST00000548650 UGT2A1Q9Y4X1 527 aa14.88□□□□□ -0.03
CHMP1A-205ENST00000548650 IGKV1D-43A0A0B4J1Z2 117 aa14.87□□□□□ -0.03
CHMP1A-205ENST00000548650 FAM220BPB1ANY3 271 aa14.87□□□□□ -0.03
CHMP1A-205ENST00000548650 B4DSR2 109 aa14.87□□□□□ -0.03
CHMP1A-205ENST00000548650 FAM157AC9JC47 383 aa14.87□□□□□ -0.03
CHMP1A-205ENST00000548650 PIP5K1CO60331 668 aa14.87□□□□□ -0.03
CHMP1A-205ENST00000548650 THRBP10828 461 aa14.87□□□□□ -0.03
CHMP1A-205ENST00000548650 MRPS34P82930 218 aaKnown RBP14.87□□□□□ -0.03
CHMP1A-205ENST00000548650 FMODQ06828 376 aa14.87□□□□□ -0.03
CHMP1A-205ENST00000548650 KLF10Q13118 480 aa14.87□□□□□ -0.03
CHMP1A-205ENST00000548650 LRRC23Q53EV4 343 aaPredicted RBP14.87□□□□□ -0.03
CHMP1A-205ENST00000548650 CGB2Q6NT52 195 aa14.87□□□□□ -0.03
CHMP1A-205ENST00000548650 RFLNBQ8N5W9 214 aa14.87□□□□□ -0.03
CHMP1A-205ENST00000548650 SMURF2Q9HAU4 748 aa14.87□□□□□ -0.03
CHMP1A-205ENST00000548650 SAR1AQ9NR31 198 aa14.87□□□□□ -0.03
CHMP1A-205ENST00000548650 TAAR3PQ9P1P4 343 aa14.87□□□□□ -0.03
CHMP1A-205ENST00000548650 TANC2Q9HCD6 1990 aa14.87□□□□□ -0.03
CHMP1A-205ENST00000548650 C17orf100A8MU93 164 aa14.86□□□□□ -0.03
CHMP1A-205ENST00000548650 NPPAP01160 153 aa14.86□□□□□ -0.03
CHMP1A-205ENST00000548650 TFP02787 698 aa14.86□□□□□ -0.03
CHMP1A-205ENST00000548650 PCMT1P22061 227 aa14.86□□□□□ -0.03
CHMP1A-205ENST00000548650 CDAP32320 146 aa14.86□□□□□ -0.03
CHMP1A-205ENST00000548650 SRP14P37108 136 aaKnown RBP14.86□□□□□ -0.03
CHMP1A-205ENST00000548650 MMEL1Q495T6 779 aa14.86□□□□□ -0.03
CHMP1A-205ENST00000548650 CYBRD1Q53TN4 286 aa14.86□□□□□ -0.03
CHMP1A-205ENST00000548650 GLCCI1Q86VQ1 547 aa14.86□□□□□ -0.03
CHMP1A-205ENST00000548650 LRRC18Q8N456 261 aa14.86□□□□□ -0.03
CHMP1A-205ENST00000548650 ZNF519Q8TB69 540 aa14.86□□□□□ -0.03
CHMP1A-205ENST00000548650 SYNPRQ8TBG9 265 aa14.86□□□□□ -0.03
CHMP1A-205ENST00000548650 C10orf82Q8WW14 230 aa14.86□□□□□ -0.03
CHMP1A-205ENST00000548650 HDAC2Q92769 488 aaKnown RBP14.86□□□□□ -0.03
CHMP1A-205ENST00000548650 ZNF416Q9BWM5 594 aa14.86□□□□□ -0.03
CHMP1A-205ENST00000548650 HINT3Q9NQE9 182 aaKnown RBP14.86□□□□□ -0.03
CHMP1A-205ENST00000548650 MRGBPQ9NV56 204 aa14.86□□□□□ -0.03
CHMP1A-205ENST00000548650 FGFR1OP2Q9NVK5 253 aa14.86□□□□□ -0.03
CHMP1A-205ENST00000548650 STX18Q9P2W9 335 aaKnown RBP14.86□□□□□ -0.03
CHMP1A-205ENST00000548650 HIF3AQ9Y2N7 669 aa14.86□□□□□ -0.03
CHMP1A-205ENST00000548650 MED31Q9Y3C7 131 aa14.86□□□□□ -0.03
CHMP1A-205ENST00000548650 IQCMA0A1B0GVH7 501 aa14.85□□□□□ -0.03
CHMP1A-205ENST00000548650 MGRN1O60291 552 aa14.85□□□□□ -0.03
CHMP1A-205ENST00000548650 PTHP01270 115 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms