RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 LINC00470Q9BZP3 86 aa25.44■■□□□ 1.66
BRF1-213ENST00000548421 HAO2Q9NYQ3 351 aa25.44■■□□□ 1.66
BRF1-213ENST00000548421 CNOT2Q9NZN8 540 aaKnown RBP25.44■■□□□ 1.66
BRF1-213ENST00000548421 FREM1Q5H8C1 2179 aa25.43■■□□□ 1.66
BRF1-213ENST00000548421 SMG1Q96Q15 3661 aaKnown RBP25.43■■□□□ 1.66
BRF1-213ENST00000548421 EFCAB10A6NFE3 127 aa25.43■■□□□ 1.66
BRF1-213ENST00000548421 UPK3AO75631 287 aa25.43■■□□□ 1.66
BRF1-213ENST00000548421 TOXO94900 526 aa25.43■■□□□ 1.66
BRF1-213ENST00000548421 GLI4P10075 376 aa25.43■■□□□ 1.66
BRF1-213ENST00000548421 GABARAPL2P60520 117 aa25.43■■□□□ 1.66
BRF1-213ENST00000548421 SIRPAP78324 504 aa25.43■■□□□ 1.66
BRF1-213ENST00000548421 ETFDHQ16134 617 aa25.43■■□□□ 1.66
BRF1-213ENST00000548421 C10orf128Q5T292 105 aa25.43■■□□□ 1.66
BRF1-213ENST00000548421 RIPPLY2Q5TAB7 128 aa25.43■■□□□ 1.66
BRF1-213ENST00000548421 B3GLCTQ6Y288 498 aa25.43■■□□□ 1.66
BRF1-213ENST00000548421 CNEP1R1Q8N9A8 125 aa25.43■■□□□ 1.66
BRF1-213ENST00000548421 IPCEF1Q8WWN9 437 aaPredicted RBP25.43■■□□□ 1.66
BRF1-213ENST00000548421 NSMAFQ92636 917 aa25.43■■□□□ 1.66
BRF1-213ENST00000548421 GGHQ92820 318 aa25.43■■□□□ 1.66
BRF1-213ENST00000548421 ZMYND19Q96E35 227 aaPredicted RBP25.43■■□□□ 1.66
BRF1-213ENST00000548421 C12orf49Q9H741 205 aa25.43■■□□□ 1.66
BRF1-213ENST00000548421 MRPS18AQ9NVS2 196 aaKnown RBP25.43■■□□□ 1.66
BRF1-213ENST00000548421 SH3BGRL2Q9UJC5 107 aa25.43■■□□□ 1.66
BRF1-213ENST00000548421 PTGES3LE9PB15 166 aa25.42■■□□□ 1.66
BRF1-213ENST00000548421 TMIGD3P0DMS9 266 aaPredicted RBP25.42■■□□□ 1.66
BRF1-213ENST00000548421 PIPP12273 146 aaPredicted RBP25.42■■□□□ 1.66
BRF1-213ENST00000548421 EDNRAP25101 427 aa25.42■■□□□ 1.66
BRF1-213ENST00000548421 KIR2DL2P43627 348 aaPredicted RBP25.42■■□□□ 1.66
BRF1-213ENST00000548421 BLVRAP53004 296 aa25.42■■□□□ 1.66
BRF1-213ENST00000548421 SLC35A2P78381 396 aa25.42■■□□□ 1.66
BRF1-213ENST00000548421 GLO1Q04760 184 aa25.42■■□□□ 1.66
BRF1-213ENST00000548421 GGTLC2Q14390 218 aa25.42■■□□□ 1.66
BRF1-213ENST00000548421 KLHL22Q53GT1 634 aa25.42■■□□□ 1.66
BRF1-213ENST00000548421 TSPO2Q5TGU0 170 aa25.42■■□□□ 1.66
BRF1-213ENST00000548421 AHSA2Q719I0 299 aa25.42■■□□□ 1.66
BRF1-213ENST00000548421 POMGNT2Q8NAT1 580 aa25.42■■□□□ 1.66
BRF1-213ENST00000548421 OR6K3Q8NGY3 331 aa25.42■■□□□ 1.66
BRF1-213ENST00000548421 ALKBH3Q96Q83 286 aaPredicted RBP25.42■■□□□ 1.66
BRF1-213ENST00000548421 ZNF696Q9H7X3 374 aa25.42■■□□□ 1.66
BRF1-213ENST00000548421 FKBP14Q9NWM8 211 aa25.42■■□□□ 1.66
BRF1-213ENST00000548421 COA3Q9Y2R0 106 aaPredicted RBP25.42■■□□□ 1.66
BRF1-213ENST00000548421 IRGMA1A4Y4 181 aa25.41■■□□□ 1.66
BRF1-213ENST00000548421 KRT33AO76009 404 aa25.41■■□□□ 1.66
BRF1-213ENST00000548421 LYNP07948 512 aa25.41■■□□□ 1.66
BRF1-213ENST00000548421 RPSAP08865 295 aaKnown RBP25.41■■□□□ 1.66
BRF1-213ENST00000548421 CEACAM8P31997 349 aaPredicted RBP25.41■■□□□ 1.66
BRF1-213ENST00000548421 OR3A2P47893 321 aa25.41■■□□□ 1.66
BRF1-213ENST00000548421 RAB40BQ12829 278 aa25.41■■□□□ 1.66
BRF1-213ENST00000548421 POU4F2Q12837 409 aa25.41■■□□□ 1.66
BRF1-213ENST00000548421 FOXF2Q12947 444 aa25.41■■□□□ 1.66
BRF1-213ENST00000548421 LGALS12Q96DT0 336 aa25.41■■□□□ 1.66
BRF1-213ENST00000548421 DUSP21Q9H596 190 aa25.41■■□□□ 1.66
BRF1-213ENST00000548421 PAK1IP1Q9NWT1 392 aaPredicted RBP25.41■■□□□ 1.66
BRF1-213ENST00000548421 INTS1Q8N201 2190 aaKnown RBP25.41■■□□□ 1.66
BRF1-213ENST00000548421 EEF1B2P24534 225 aaKnown RBP25.4■■□□□ 1.66
BRF1-213ENST00000548421 GLB1L2Q8IW92 636 aa25.4■■□□□ 1.66
BRF1-213ENST00000548421 OR51G2Q8NGK0 314 aa25.4■■□□□ 1.66
BRF1-213ENST00000548421 COPS4Q9BT78 406 aa25.4■■□□□ 1.66
BRF1-213ENST00000548421 CCNB1IP1Q9NPC3 277 aa25.4■■□□□ 1.66
BRF1-213ENST00000548421 SLC7A10Q9NS82 523 aa25.4■■□□□ 1.66
BRF1-213ENST00000548421 POLEQ07864 2286 aa25.4■■□□□ 1.66
BRF1-213ENST00000548421 ZFYVE26Q68DK2 2539 aa25.4■■□□□ 1.66
BRF1-213ENST00000548421 TRGV8A0A0C4DH27 118 aa25.4■■□□□ 1.66
BRF1-213ENST00000548421 TRIM64A6NGJ6 449 aa25.4■■□□□ 1.66
BRF1-213ENST00000548421 DHHO43323 396 aa25.4■■□□□ 1.66
BRF1-213ENST00000548421 IGHV3-9P01782 118 aa25.4■■□□□ 1.66
BRF1-213ENST00000548421 ATP6V1E1P36543 226 aa25.4■■□□□ 1.66
BRF1-213ENST00000548421 CA7P43166 264 aa25.4■■□□□ 1.66
BRF1-213ENST00000548421 NAXEQ8NCW5 288 aa25.4■■□□□ 1.66
BRF1-213ENST00000548421 MYDGFQ969H8 173 aa25.4■■□□□ 1.66
BRF1-213ENST00000548421 BBC3Q96PG8 261 aaPredicted RBP25.4■■□□□ 1.66
BRF1-213ENST00000548421 CRLF2Q9HC73 371 aa25.4■■□□□ 1.66
BRF1-213ENST00000548421 UPB1Q9UBR1 384 aa25.4■■□□□ 1.66
BRF1-213ENST00000548421 E9PLN8 166 aa25.39■■□□□ 1.65
BRF1-213ENST00000548421 TNFSF13O75888 250 aa25.39■■□□□ 1.65
BRF1-213ENST00000548421 GPANK1O95872 356 aa25.39■■□□□ 1.65
BRF1-213ENST00000548421 HLA-DQA2P01906 255 aa25.39■■□□□ 1.65
BRF1-213ENST00000548421 ZNF84P51523 738 aa25.39■■□□□ 1.65
BRF1-213ENST00000548421 PMPCAQ10713 525 aa25.39■■□□□ 1.65
BRF1-213ENST00000548421 VWA1Q6PCB0 445 aa25.39■■□□□ 1.65
BRF1-213ENST00000548421 LYPD4Q6UWN0 246 aa25.39■■□□□ 1.65
BRF1-213ENST00000548421 LINGO2Q7L985 606 aa25.39■■□□□ 1.65
BRF1-213ENST00000548421 ZNF511Q8NB15 262 aa25.39■■□□□ 1.65
BRF1-213ENST00000548421 FOXN4Q96NZ1 517 aa25.39■■□□□ 1.65
BRF1-213ENST00000548421 CNN2Q99439 309 aaKnown RBP25.39■■□□□ 1.65
BRF1-213ENST00000548421 VKORC1Q9BQB6 163 aa25.39■■□□□ 1.65
BRF1-213ENST00000548421 RBM24Q9BX46 236 aaKnown RBP25.39■■□□□ 1.65
BRF1-213ENST00000548421 ADGRL4Q9HBW9 690 aa25.39■■□□□ 1.65
BRF1-213ENST00000548421 GPR35Q9HC97 309 aa25.39■■□□□ 1.65
BRF1-213ENST00000548421 EXOGQ9Y2C4 368 aaKnown RBP25.39■■□□□ 1.65
BRF1-213ENST00000548421 A0A1W2PPL8 197 aa25.38■■□□□ 1.65
BRF1-213ENST00000548421 MAGEA13PA6NCF6 341 aa25.38■■□□□ 1.65
BRF1-213ENST00000548421 APOL3O95236 402 aa25.38■■□□□ 1.65
BRF1-213ENST00000548421 MRPL3P09001 348 aaKnown RBP25.38■■□□□ 1.65
BRF1-213ENST00000548421 SBK2P0C263 348 aa25.38■■□□□ 1.65
BRF1-213ENST00000548421 LAP3P28838 519 aa25.38■■□□□ 1.65
BRF1-213ENST00000548421 ROR2Q01974 943 aaKnown RBP25.38■■□□□ 1.65
BRF1-213ENST00000548421 HSF2Q03933 536 aa25.38■■□□□ 1.65
BRF1-213ENST00000548421 ST3GAL4Q11206 333 aa25.38■■□□□ 1.65
BRF1-213ENST00000548421 TFAP2EQ6VUC0 442 aa25.38■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms