RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 IKZF2Q9UKS7 526 aa12.02□□□□□ -0.49
PTCH1-215ENST00000547672 ZNF281Q9Y2X9 895 aa12.02□□□□□ -0.49
PTCH1-215ENST00000547672 TRAV1-2A0A0B4J238 106 aa12.01□□□□□ -0.49
PTCH1-215ENST00000547672 IQCMA0A1B0GVH7 501 aa12.01□□□□□ -0.49
PTCH1-215ENST00000547672 LRRC3CA6NJW4 275 aa12.01□□□□□ -0.49
PTCH1-215ENST00000547672 TMEM212A6NML5 194 aa12.01□□□□□ -0.49
PTCH1-215ENST00000547672 H7C1C5 153 aa12.01□□□□□ -0.49
PTCH1-215ENST00000547672 MASP2O00187 686 aa12.01□□□□□ -0.49
PTCH1-215ENST00000547672 PDCD5O14737 125 aa12.01□□□□□ -0.49
PTCH1-215ENST00000547672 NME2P1O60361 137 aa12.01□□□□□ -0.49
PTCH1-215ENST00000547672 ACTL6AO96019 429 aa12.01□□□□□ -0.49
PTCH1-215ENST00000547672 LALBAP00709 142 aa12.01□□□□□ -0.49
PTCH1-215ENST00000547672 INHBBP09529 407 aa12.01□□□□□ -0.49
PTCH1-215ENST00000547672 HLA-DOBP13765 273 aa12.01□□□□□ -0.49
PTCH1-215ENST00000547672 NME2P22392 152 aa12.01□□□□□ -0.49
PTCH1-215ENST00000547672 TCEA1P23193 301 aaKnown RBP12.01□□□□□ -0.49
PTCH1-215ENST00000547672 LAP3P28838 519 aa12.01□□□□□ -0.49
PTCH1-215ENST00000547672 PTGS2P35354 604 aa12.01□□□□□ -0.49
PTCH1-215ENST00000547672 CD79BP40259 229 aa12.01□□□□□ -0.49
PTCH1-215ENST00000547672 RANBP1P43487 201 aa12.01□□□□□ -0.49
PTCH1-215ENST00000547672 CD97P48960 835 aa12.01□□□□□ -0.49
PTCH1-215ENST00000547672 GDI2P50395 445 aaKnown RBP12.01□□□□□ -0.49
PTCH1-215ENST00000547672 P2RY4P51582 365 aa12.01□□□□□ -0.49
PTCH1-215ENST00000547672 CCR9P51686 369 aa12.01□□□□□ -0.49
PTCH1-215ENST00000547672 B3GALT5-AS1P59052 145 aa12.01□□□□□ -0.49
PTCH1-215ENST00000547672 LCN6P62502 163 aa12.01□□□□□ -0.49
PTCH1-215ENST00000547672 ARG2P78540 354 aa12.01□□□□□ -0.49
PTCH1-215ENST00000547672 FOXO1Q12778 655 aa12.01□□□□□ -0.49
PTCH1-215ENST00000547672 MELKQ14680 651 aa12.01□□□□□ -0.49
PTCH1-215ENST00000547672 ZNF684Q5T5D7 378 aa12.01□□□□□ -0.49
PTCH1-215ENST00000547672 FDX2Q6P4F2 183 aa12.01□□□□□ -0.49
PTCH1-215ENST00000547672 NHLRC1Q6VVB1 395 aa12.01□□□□□ -0.49
PTCH1-215ENST00000547672 DPY19L4Q7Z388 723 aa12.01□□□□□ -0.49
PTCH1-215ENST00000547672 CEACAM19Q7Z692 300 aa12.01□□□□□ -0.49
PTCH1-215ENST00000547672 KRT77Q7Z794 578 aa12.01□□□□□ -0.49
PTCH1-215ENST00000547672 YRDCQ86U90 279 aaKnown RBP12.01□□□□□ -0.49
PTCH1-215ENST00000547672 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.01□□□□□ -0.49
PTCH1-215ENST00000547672 SULF2Q8IWU5 870 aa12.01□□□□□ -0.49
PTCH1-215ENST00000547672 KDM8Q8N371 416 aa12.01□□□□□ -0.49
PTCH1-215ENST00000547672 MEIOBQ8N635 442 aa12.01□□□□□ -0.49
PTCH1-215ENST00000547672 ZFP41Q8N8Y5 198 aa12.01□□□□□ -0.49
PTCH1-215ENST00000547672 SYT14Q8NB59 555 aa12.01□□□□□ -0.49
PTCH1-215ENST00000547672 NOXO1Q8NFA2 376 aa12.01□□□□□ -0.49
PTCH1-215ENST00000547672 OR2V1Q8NHB1 315 aa12.01□□□□□ -0.49
PTCH1-215ENST00000547672 NSMAFQ92636 917 aa12.01□□□□□ -0.49
PTCH1-215ENST00000547672 KCTD12Q96CX2 325 aaKnown RBP12.01□□□□□ -0.49
PTCH1-215ENST00000547672 MFRPQ9BY79 579 aa12.01□□□□□ -0.49
PTCH1-215ENST00000547672 SLITRK2Q9H156 845 aa12.01□□□□□ -0.49
PTCH1-215ENST00000547672 B3GAT2Q9NPZ5 323 aa12.01□□□□□ -0.49
PTCH1-215ENST00000547672 B3GAT1Q9P2W7 334 aa12.01□□□□□ -0.49
PTCH1-215ENST00000547672 ST6GALNAC2Q9UJ37 374 aa12.01□□□□□ -0.49
PTCH1-215ENST00000547672 ZMIZ1Q9ULJ6 1067 aa12.01□□□□□ -0.49
PTCH1-215ENST00000547672 COA3Q9Y2R0 106 aaPredicted RBP12.01□□□□□ -0.49
PTCH1-215ENST00000547672 HRH3Q9Y5N1 445 aa12.01□□□□□ -0.49
PTCH1-215ENST00000547672 A0A0J9YW62 118 aa12□□□□□ -0.49
PTCH1-215ENST00000547672 SLC35F4A4IF30 521 aa12□□□□□ -0.49
PTCH1-215ENST00000547672 TVP23AA6NH52 213 aa12□□□□□ -0.49
PTCH1-215ENST00000547672 LOC110117498-PIK3R3F6TDL0 507 aa12□□□□□ -0.49
PTCH1-215ENST00000547672 DCTN6O00399 190 aa12□□□□□ -0.49
PTCH1-215ENST00000547672 EIF1AYO14602 144 aaKnown RBP12□□□□□ -0.49
PTCH1-215ENST00000547672 GPR171O14626 319 aa12□□□□□ -0.49
PTCH1-215ENST00000547672 TRAF3IP2O43734 574 aaPredicted RBP12□□□□□ -0.49
PTCH1-215ENST00000547672 SPARCP09486 303 aa12□□□□□ -0.49
PTCH1-215ENST00000547672 PGA4P0DJD7 388 aa12□□□□□ -0.49
PTCH1-215ENST00000547672 PGA3P0DJD8 388 aa12□□□□□ -0.49
PTCH1-215ENST00000547672 CTLA4P16410 223 aa12□□□□□ -0.49
PTCH1-215ENST00000547672 DCTDP32321 178 aa12□□□□□ -0.49
PTCH1-215ENST00000547672 SDC2P34741 201 aa12□□□□□ -0.49
PTCH1-215ENST00000547672 PSMD7P51665 324 aa12□□□□□ -0.49
PTCH1-215ENST00000547672 RIDAP52758 137 aaKnown RBP12□□□□□ -0.49
PTCH1-215ENST00000547672 HCCSP53701 268 aa12□□□□□ -0.49
PTCH1-215ENST00000547672 ALKBH1Q13686 389 aaKnown RBP12□□□□□ -0.49
PTCH1-215ENST00000547672 SLC10A1Q14973 349 aa12□□□□□ -0.49
PTCH1-215ENST00000547672 KCNMB1Q16558 191 aa12□□□□□ -0.49
PTCH1-215ENST00000547672 PCK2Q16822 640 aa12□□□□□ -0.49
PTCH1-215ENST00000547672 ACSM3Q53FZ2 586 aa12□□□□□ -0.49
PTCH1-215ENST00000547672 CREB3L2Q70SY1 520 aa12□□□□□ -0.49
PTCH1-215ENST00000547672 MDS2Q8NDY4 140 aa12□□□□□ -0.49
PTCH1-215ENST00000547672 SLC26A10Q8NG04 563 aa12□□□□□ -0.49
PTCH1-215ENST00000547672 OR6N1Q8NGY5 312 aa12□□□□□ -0.49
PTCH1-215ENST00000547672 OR2AJ1Q8NGZ0 328 aa12□□□□□ -0.49
PTCH1-215ENST00000547672 OR5AK2Q8NH90 309 aa12□□□□□ -0.49
PTCH1-215ENST00000547672 ZNRF4Q8WWF5 429 aa12□□□□□ -0.49
PTCH1-215ENST00000547672 TXNDC15Q96J42 360 aa12□□□□□ -0.49
PTCH1-215ENST00000547672 SIGLEC12Q96PQ1 595 aa12□□□□□ -0.49
PTCH1-215ENST00000547672 OR8B4Q96RC9 309 aa12□□□□□ -0.49
PTCH1-215ENST00000547672 UBL7Q96S82 380 aaPredicted RBP12□□□□□ -0.49
PTCH1-215ENST00000547672 NIPAL2Q9H841 368 aa12□□□□□ -0.49
PTCH1-215ENST00000547672 ACKR4Q9NPB9 350 aa12□□□□□ -0.49
PTCH1-215ENST00000547672 MED29Q9NX70 200 aa12□□□□□ -0.49
PTCH1-215ENST00000547672 DLL3Q9NYJ7 618 aa12□□□□□ -0.49
PTCH1-215ENST00000547672 COPS3Q9UNS2 423 aa12□□□□□ -0.49
PTCH1-215ENST00000547672 RCE1Q9Y256 329 aa12□□□□□ -0.49
PTCH1-215ENST00000547672 OR6C65A6NJZ3 312 aa11.99□□□□□ -0.49
PTCH1-215ENST00000547672 TNFSF11O14788 317 aa11.99□□□□□ -0.49
PTCH1-215ENST00000547672 SYNGR4O95473 234 aa11.99□□□□□ -0.49
PTCH1-215ENST00000547672 OPN1LWP04000 364 aa11.99□□□□□ -0.49
PTCH1-215ENST00000547672 RAF1P04049 648 aa11.99□□□□□ -0.49
PTCH1-215ENST00000547672 OPRL1P41146 370 aa11.99□□□□□ -0.49
PTCH1-215ENST00000547672 CSNK1A1P48729 337 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms