RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 FBXW4P57775 412 aa1.76□□□□□ -2.13
CCDC38-204ENST00000546816 LOXL1Q08397 574 aaPredicted RBP1.76□□□□□ -2.13
CCDC38-204ENST00000546816 SYCNQ0VAF6 134 aa1.76□□□□□ -2.13
CCDC38-204ENST00000546816 MRPL28Q13084 256 aaKnown RBP1.76□□□□□ -2.13
CCDC38-204ENST00000546816 TAF7Q15545 349 aaPredicted RBP1.76□□□□□ -2.13
CCDC38-204ENST00000546816 POU2AF1Q16633 256 aa1.76□□□□□ -2.13
CCDC38-204ENST00000546816 ATAD3BQ5T9A4 648 aa1.76□□□□□ -2.13
CCDC38-204ENST00000546816 ENPP6Q6UWR7 440 aa1.76□□□□□ -2.13
CCDC38-204ENST00000546816 KDM7AQ6ZMT4 941 aa1.76□□□□□ -2.13
CCDC38-204ENST00000546816 NTM-AS1Q6ZSK4 140 aa1.76□□□□□ -2.13
CCDC38-204ENST00000546816 HDDC2Q7Z4H3 204 aa1.76□□□□□ -2.13
CCDC38-204ENST00000546816 STEAP2Q8NFT2 490 aa1.76□□□□□ -2.13
CCDC38-204ENST00000546816 RSPH1Q8WYR4 309 aa1.76□□□□□ -2.13
CCDC38-204ENST00000546816 CREB3L1Q96BA8 519 aa1.76□□□□□ -2.13
CCDC38-204ENST00000546816 NARS2Q96I59 477 aaKnown RBP1.76□□□□□ -2.13
CCDC38-204ENST00000546816 HSFY1Q96LI6 401 aa1.76□□□□□ -2.13
CCDC38-204ENST00000546816 TTC25Q96NG3 672 aa1.76□□□□□ -2.13
CCDC38-204ENST00000546816 MCCC2Q9HCC0 563 aa1.76□□□□□ -2.13
CCDC38-204ENST00000546816 ADAM28Q9UKQ2 775 aa1.76□□□□□ -2.13
CCDC38-204ENST00000546816 ISY1Q9ULR0 285 aaKnown RBP1.76□□□□□ -2.13
CCDC38-204ENST00000546816 SNX6Q9UNH7 406 aa1.76□□□□□ -2.13
CCDC38-204ENST00000546816 ZNF726A6NNF4 738 aa1.75□□□□□ -2.13
CCDC38-204ENST00000546816 CCL21O00585 134 aa1.75□□□□□ -2.13
CCDC38-204ENST00000546816 DYNC1I1O14576 645 aa1.75□□□□□ -2.13
CCDC38-204ENST00000546816 SOX15O60248 233 aa1.75□□□□□ -2.13
CCDC38-204ENST00000546816 RP2O75695 350 aa1.75□□□□□ -2.13
CCDC38-204ENST00000546816 EIF3GO75821 320 aaKnown RBP eCLIP1.75□□□□□ -2.13
CCDC38-204ENST00000546816 HLA-DPB1P04440 258 aa1.75□□□□□ -2.13
CCDC38-204ENST00000546816 SERPINB5P36952 375 aa1.75□□□□□ -2.13
CCDC38-204ENST00000546816 EPS15P42566 896 aa1.75□□□□□ -2.13
CCDC38-204ENST00000546816 ZNF92Q03936 586 aa1.75□□□□□ -2.13
CCDC38-204ENST00000546816 FGL1Q08830 312 aa1.75□□□□□ -2.13
CCDC38-204ENST00000546816 ZNF816Q0VGE8 651 aaPredicted RBP1.75□□□□□ -2.13
CCDC38-204ENST00000546816 PON3Q15166 354 aa1.75□□□□□ -2.13
CCDC38-204ENST00000546816 IGFBP7Q16270 282 aa1.75□□□□□ -2.13
CCDC38-204ENST00000546816 RABL6Q3YEC7 729 aaPredicted RBP1.75□□□□□ -2.13
CCDC38-204ENST00000546816 VAX1Q5SQQ9 334 aa1.75□□□□□ -2.13
CCDC38-204ENST00000546816 LINC00173Q6ZV60 143 aa1.75□□□□□ -2.13
CCDC38-204ENST00000546816 ABHD3Q8WU67 409 aa1.75□□□□□ -2.13
CCDC38-204ENST00000546816 C10orf35Q96D05 121 aa1.75□□□□□ -2.13
CCDC38-204ENST00000546816 SEH1LQ96EE3 360 aa1.75□□□□□ -2.13
CCDC38-204ENST00000546816 IFT74Q96LB3 600 aa1.75□□□□□ -2.13
CCDC38-204ENST00000546816 MS4A4EQ96PG1 132 aa1.75□□□□□ -2.13
CCDC38-204ENST00000546816 DOK1Q99704 481 aa1.75□□□□□ -2.13
CCDC38-204ENST00000546816 FOXC2Q99958 501 aa1.75□□□□□ -2.13
CCDC38-204ENST00000546816 ERP44Q9BS26 406 aa1.75□□□□□ -2.13
CCDC38-204ENST00000546816 TMEM59Q9BXS4 323 aa1.75□□□□□ -2.13
CCDC38-204ENST00000546816 SYNDIG1Q9H7V2 258 aa1.75□□□□□ -2.13
CCDC38-204ENST00000546816 UBE2ZQ9H832 354 aaPredicted RBP1.75□□□□□ -2.13
CCDC38-204ENST00000546816 NMRAL1Q9HBL8 299 aa1.75□□□□□ -2.13
CCDC38-204ENST00000546816 CDH9Q9ULB4 789 aa1.75□□□□□ -2.13
CCDC38-204ENST00000546816 YEATS2Q9ULM3 1422 aa1.74□□□□□ -2.13
CCDC38-204ENST00000546816 KMOO15229 486 aa1.74□□□□□ -2.13
CCDC38-204ENST00000546816 ERLIN2O94905 339 aa1.74□□□□□ -2.13
CCDC38-204ENST00000546816 ADRA2AP08913 450 aa1.74□□□□□ -2.13
CCDC38-204ENST00000546816 C1GALT1C1LP0DN25 315 aa1.74□□□□□ -2.13
CCDC38-204ENST00000546816 PRPS2P11908 318 aa1.74□□□□□ -2.13
CCDC38-204ENST00000546816 CSNK1A1P48729 337 aa1.74□□□□□ -2.13
CCDC38-204ENST00000546816 CX3CR1P49238 355 aa1.74□□□□□ -2.13
CCDC38-204ENST00000546816 ATP1B3P54709 279 aa1.74□□□□□ -2.13
CCDC38-204ENST00000546816 IRF4Q15306 451 aa1.74□□□□□ -2.13
CCDC38-204ENST00000546816 ZNF77Q15935 545 aa1.74□□□□□ -2.13
CCDC38-204ENST00000546816 CFAP157Q5JU67 520 aa1.74□□□□□ -2.13
CCDC38-204ENST00000546816 PDZK1Q5T2W1 519 aa1.74□□□□□ -2.13
CCDC38-204ENST00000546816 ZNF684Q5T5D7 378 aa1.74□□□□□ -2.13
CCDC38-204ENST00000546816 TEX43Q6ZNM6 134 aa1.74□□□□□ -2.13
CCDC38-204ENST00000546816 SLC25A48Q6ZT89 311 aaKnown RBP1.74□□□□□ -2.13
CCDC38-204ENST00000546816 LHFPL3Q86UP9 236 aa1.74□□□□□ -2.13
CCDC38-204ENST00000546816 LRRC75A-AS1Q8N1F1 130 aa1.74□□□□□ -2.13
CCDC38-204ENST00000546816 OSR2Q8N2R0 312 aa1.74□□□□□ -2.13
CCDC38-204ENST00000546816 SCFD1Q8WVM8 642 aa1.74□□□□□ -2.13
CCDC38-204ENST00000546816 TM4SF18Q96CE8 201 aa1.74□□□□□ -2.13
CCDC38-204ENST00000546816 CNN2Q99439 309 aaKnown RBP1.74□□□□□ -2.13
CCDC38-204ENST00000546816 P2RX4Q99571 388 aa1.74□□□□□ -2.13
CCDC38-204ENST00000546816 ZSCAN5AQ9BUG6 496 aa1.74□□□□□ -2.13
CCDC38-204ENST00000546816 PPA2Q9H2U2 334 aa1.74□□□□□ -2.13
CCDC38-204ENST00000546816 DDX19AQ9NUU7 478 aaKnown RBP1.74□□□□□ -2.13
CCDC38-204ENST00000546816 GPATCH2LQ9NWQ4 482 aa1.74□□□□□ -2.13
CCDC38-204ENST00000546816 S4R3C0 116 aa1.74□□□□□ -2.13
CCDC38-204ENST00000546816 ITGB4P16144 1822 aa1.74□□□□□ -2.13
CCDC38-204ENST00000546816 ADAMTS13Q76LX8 1427 aa1.74□□□□□ -2.13
CCDC38-204ENST00000546816 IGKV3D-11A0A0A0MRZ8 115 aa1.73□□□□□ -2.13
CCDC38-204ENST00000546816 C17orf51A8MQB3 221 aa1.73□□□□□ -2.13
CCDC38-204ENST00000546816 RAD51BO15315 384 aa1.73□□□□□ -2.13
CCDC38-204ENST00000546816 ZNF207O43670 478 aaKnown RBP1.73□□□□□ -2.13
CCDC38-204ENST00000546816 SNNO75324 88 aaPredicted RBP1.73□□□□□ -2.13
CCDC38-204ENST00000546816 SPAG6O75602 509 aa1.73□□□□□ -2.13
CCDC38-204ENST00000546816 GABARAPO95166 117 aa1.73□□□□□ -2.13
CCDC38-204ENST00000546816 TSPAN12O95859 305 aa1.73□□□□□ -2.13
CCDC38-204ENST00000546816 BCHEP06276 602 aa1.73□□□□□ -2.13
CCDC38-204ENST00000546816 CCNB1P14635 433 aa1.73□□□□□ -2.13
CCDC38-204ENST00000546816 HRH1P35367 487 aa1.73□□□□□ -2.13
CCDC38-204ENST00000546816 THEM4Q5T1C6 240 aa1.73□□□□□ -2.13
CCDC38-204ENST00000546816 GALNT17Q6IS24 598 aa1.73□□□□□ -2.13
CCDC38-204ENST00000546816 LRRC74BQ6ZQY2 392 aa1.73□□□□□ -2.13
CCDC38-204ENST00000546816 EFL1Q7Z2Z2 1120 aaKnown RBP1.73□□□□□ -2.13
CCDC38-204ENST00000546816 RIMKLAQ8IXN7 391 aa1.73□□□□□ -2.13
CCDC38-204ENST00000546816 PUSL1Q8N0Z8 303 aaKnown RBP1.73□□□□□ -2.13
CCDC38-204ENST00000546816 NECAP1Q8NC96 275 aa1.73□□□□□ -2.13
CCDC38-204ENST00000546816 OR2G2Q8NGZ5 317 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms