RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 ZCCHC24Q8N2G6 241 aaKnown RBP8.06□□□□□ -1.12
YBX3-218ENST00000546298 RBM15BQ8NDT2 890 aaKnown RBP8.06□□□□□ -1.12
YBX3-218ENST00000546298 NOXO1Q8NFA2 376 aa8.06□□□□□ -1.12
YBX3-218ENST00000546298 PFN4Q8NHR9 129 aa8.06□□□□□ -1.12
YBX3-218ENST00000546298 ASB10Q8WXI3 467 aa8.06□□□□□ -1.12
YBX3-218ENST00000546298 C11orf40Q8WZ69 217 aa8.06□□□□□ -1.12
YBX3-218ENST00000546298 RDH5Q92781 318 aa8.06□□□□□ -1.12
YBX3-218ENST00000546298 MSI2Q96DH6 328 aaKnown RBP8.06□□□□□ -1.12
YBX3-218ENST00000546298 PRRC1Q96M27 445 aa8.06□□□□□ -1.12
YBX3-218ENST00000546298 RBP7Q96R05 134 aa8.06□□□□□ -1.12
YBX3-218ENST00000546298 ZNF347Q96SE7 839 aa8.06□□□□□ -1.12
YBX3-218ENST00000546298 SEPHS2Q99611 448 aa8.06□□□□□ -1.12
YBX3-218ENST00000546298 SH3GL3Q99963 347 aa8.06□□□□□ -1.12
YBX3-218ENST00000546298 HOPXQ9BPY8 73 aaPredicted RBP8.06□□□□□ -1.12
YBX3-218ENST00000546298 SYT3Q9BQG1 590 aa8.06□□□□□ -1.12
YBX3-218ENST00000546298 FNDC11Q9BVV2 318 aa8.06□□□□□ -1.12
YBX3-218ENST00000546298 MRPL13Q9BYD1 178 aaKnown RBP8.06□□□□□ -1.12
YBX3-218ENST00000546298 BCL2L14Q9BZR8 327 aa8.06□□□□□ -1.12
YBX3-218ENST00000546298 CCDC134Q9H6E4 229 aa8.06□□□□□ -1.12
YBX3-218ENST00000546298 SIAEQ9HAT2 523 aa8.06□□□□□ -1.12
YBX3-218ENST00000546298 SMURF2Q9HAU4 748 aa8.06□□□□□ -1.12
YBX3-218ENST00000546298 CCNB1IP1Q9NPC3 277 aa8.06□□□□□ -1.12
YBX3-218ENST00000546298 C20orf141Q9NUB4 165 aa8.06□□□□□ -1.12
YBX3-218ENST00000546298 DUSP13Q9UII6 198 aa8.06□□□□□ -1.12
YBX3-218ENST00000546298 MAP1AP78559 2803 aaPredicted RBP8.06□□□□□ -1.12
YBX3-218ENST00000546298 NSD1Q96L73 2696 aaPredicted RBP8.06□□□□□ -1.12
YBX3-218ENST00000546298 GSTA4O15217 222 aa8.05□□□□□ -1.12
YBX3-218ENST00000546298 SHOX2O60902 331 aaPredicted RBP8.05□□□□□ -1.12
YBX3-218ENST00000546298 SNAP29O95721 258 aa8.05□□□□□ -1.12
YBX3-218ENST00000546298 MT-ND5P03915 603 aa8.05□□□□□ -1.12
YBX3-218ENST00000546298 IFNW1P05000 195 aa8.05□□□□□ -1.12
YBX3-218ENST00000546298 TACSTD2P09758 323 aa8.05□□□□□ -1.12
YBX3-218ENST00000546298 IFI30P13284 250 aa8.05□□□□□ -1.12
YBX3-218ENST00000546298 SRD5A1P18405 259 aa8.05□□□□□ -1.12
YBX3-218ENST00000546298 APLNRP35414 380 aa8.05□□□□□ -1.12
YBX3-218ENST00000546298 ALDH3B1P43353 468 aa8.05□□□□□ -1.12
YBX3-218ENST00000546298 ZNF133P52736 654 aaPredicted RBP8.05□□□□□ -1.12
YBX3-218ENST00000546298 TMEM33P57088 247 aa8.05□□□□□ -1.12
YBX3-218ENST00000546298 MRPS11P82912 194 aaKnown RBP8.05□□□□□ -1.12
YBX3-218ENST00000546298 MYBPC1Q00872 1141 aa8.05□□□□□ -1.12
YBX3-218ENST00000546298 GUCY1A3Q02108 690 aa8.05□□□□□ -1.12
YBX3-218ENST00000546298 RUNX1T1Q06455 604 aa8.05□□□□□ -1.12
YBX3-218ENST00000546298 RIN1Q13671 783 aa8.05□□□□□ -1.12
YBX3-218ENST00000546298 TRAM2Q15035 370 aa8.05□□□□□ -1.12
YBX3-218ENST00000546298 NKPD1Q17RQ9 610 aa8.05□□□□□ -1.12
YBX3-218ENST00000546298 ALG10Q5BKT4 473 aa8.05□□□□□ -1.12
YBX3-218ENST00000546298 ARMC4Q5T2S8 1044 aa8.05□□□□□ -1.12
YBX3-218ENST00000546298 FAM205BPQ63HN1 556 aa8.05□□□□□ -1.12
YBX3-218ENST00000546298 CGB2Q6NT52 195 aa8.05□□□□□ -1.12
YBX3-218ENST00000546298 SLC15A3Q8IY34 581 aa8.05□□□□□ -1.12
YBX3-218ENST00000546298 RNF113BQ8IZP6 322 aaKnown RBP8.05□□□□□ -1.12
YBX3-218ENST00000546298 SYT14Q8NB59 555 aa8.05□□□□□ -1.12
YBX3-218ENST00000546298 MOSPD2Q8NHP6 518 aa8.05□□□□□ -1.12
YBX3-218ENST00000546298 FGFBP3Q8TAT2 258 aa8.05□□□□□ -1.12
YBX3-218ENST00000546298 ZNF519Q8TB69 540 aa8.05□□□□□ -1.12
YBX3-218ENST00000546298 SNX33Q8WV41 574 aa8.05□□□□□ -1.12
YBX3-218ENST00000546298 RCN3Q96D15 328 aa8.05□□□□□ -1.12
YBX3-218ENST00000546298 ALG12Q9BV10 488 aa8.05□□□□□ -1.12
YBX3-218ENST00000546298 NDEL1Q9GZM8 345 aa8.05□□□□□ -1.12
YBX3-218ENST00000546298 TXNIPQ9H3M7 391 aa8.05□□□□□ -1.12
YBX3-218ENST00000546298 TPK1Q9H3S4 243 aa8.05□□□□□ -1.12
YBX3-218ENST00000546298 CHODLQ9H9P2 273 aa8.05□□□□□ -1.12
YBX3-218ENST00000546298 EFCAB1Q9HAE3 211 aa8.05□□□□□ -1.12
YBX3-218ENST00000546298 MED4Q9NPJ6 270 aa8.05□□□□□ -1.12
YBX3-218ENST00000546298 CMTM6Q9NX76 183 aa8.05□□□□□ -1.12
YBX3-218ENST00000546298 SLCO1C1Q9NYB5 712 aa8.05□□□□□ -1.12
YBX3-218ENST00000546298 EIF3KQ9UBQ5 218 aaKnown RBP8.05□□□□□ -1.12
YBX3-218ENST00000546298 HIF3AQ9Y2N7 669 aa8.05□□□□□ -1.12
YBX3-218ENST00000546298 LRP5LA4QPB2 252 aa8.04□□□□□ -1.12
YBX3-218ENST00000546298 A6NIZ1 184 aa8.04□□□□□ -1.12
YBX3-218ENST00000546298 CXCR6O00574 342 aa8.04□□□□□ -1.12
YBX3-218ENST00000546298 LILRA1O75019 489 aa8.04□□□□□ -1.12
YBX3-218ENST00000546298 LCKP06239 509 aa8.04□□□□□ -1.12
YBX3-218ENST00000546298 IGFBP1P08833 259 aaPredicted RBP8.04□□□□□ -1.12
YBX3-218ENST00000546298 TSPAN19P0C672 248 aa8.04□□□□□ -1.12
YBX3-218ENST00000546298 FAM157BP0CG42 384 aa8.04□□□□□ -1.12
YBX3-218ENST00000546298 SAGP10523 405 aaPredicted RBP8.04□□□□□ -1.12
YBX3-218ENST00000546298 COX4I1P13073 169 aa8.04□□□□□ -1.12
YBX3-218ENST00000546298 TCN1P20061 433 aaPredicted RBP8.04□□□□□ -1.12
YBX3-218ENST00000546298 ACHEP22303 614 aa8.04□□□□□ -1.12
YBX3-218ENST00000546298 IGFBP5P24593 272 aa8.04□□□□□ -1.12
YBX3-218ENST00000546298 APEX1P27695 318 aaKnown RBP8.04□□□□□ -1.12
YBX3-218ENST00000546298 MDH1P40925 334 aaKnown RBP8.04□□□□□ -1.12
YBX3-218ENST00000546298 GPR6P46095 362 aaPredicted RBP8.04□□□□□ -1.12
YBX3-218ENST00000546298 SEC24CP53992 1094 aa8.04□□□□□ -1.12
YBX3-218ENST00000546298 UCP2P55851 309 aa8.04□□□□□ -1.12
YBX3-218ENST00000546298 KLF3P57682 345 aaPredicted RBP8.04□□□□□ -1.12
YBX3-218ENST00000546298 RAP1BP61224 184 aa8.04□□□□□ -1.12
YBX3-218ENST00000546298 RPL27P61353 136 aaKnown RBP8.04□□□□□ -1.12
YBX3-218ENST00000546298 PCBD1P61457 104 aa8.04□□□□□ -1.12
YBX3-218ENST00000546298 RAP1AP62834 184 aa8.04□□□□□ -1.12
YBX3-218ENST00000546298 LIPEQ05469 1076 aa8.04□□□□□ -1.12
YBX3-218ENST00000546298 CD47Q08722 323 aa8.04□□□□□ -1.12
YBX3-218ENST00000546298 LAPTM4AQ15012 233 aa8.04□□□□□ -1.12
YBX3-218ENST00000546298 SGCAQ16586 387 aa8.04□□□□□ -1.12
YBX3-218ENST00000546298 MSMPQ1L6U9 139 aa8.04□□□□□ -1.12
YBX3-218ENST00000546298 PCGF3Q3KNV8 242 aa8.04□□□□□ -1.12
YBX3-218ENST00000546298 IFI44LQ53G44 452 aa8.04□□□□□ -1.12
YBX3-218ENST00000546298 FAM120AOSQ5T036 256 aa8.04□□□□□ -1.12
YBX3-218ENST00000546298 THEM4Q5T1C6 240 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms