RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 SONP18583 2426 aaKnown RBP6.68□□□□□ -1.34
SNHG1-223ENST00000545440 TANC2Q9HCD6 1990 aa6.68□□□□□ -1.34
SNHG1-223ENST00000545440 NF1P21359 2839 aa6.68□□□□□ -1.34
SNHG1-223ENST00000545440 ABCA2Q9BZC7 2435 aa6.67□□□□□ -1.34
SNHG1-223ENST00000545440 IGHV1-18A0A0C4DH31 117 aa6.67□□□□□ -1.34
SNHG1-223ENST00000545440 LRRN3E7EW58 273 aa6.67□□□□□ -1.34
SNHG1-223ENST00000545440 PLPP3O14495 311 aa6.67□□□□□ -1.34
SNHG1-223ENST00000545440 ATP8B1O43520 1251 aa6.67□□□□□ -1.34
SNHG1-223ENST00000545440 CCDC22O60826 627 aa6.67□□□□□ -1.34
SNHG1-223ENST00000545440 PDE5AO76074 875 aa6.67□□□□□ -1.34
SNHG1-223ENST00000545440 OR5F1O95221 314 aa6.67□□□□□ -1.34
SNHG1-223ENST00000545440 IGF2P01344 180 aa6.67□□□□□ -1.34
SNHG1-223ENST00000545440 CRYAAP02489 173 aa6.67□□□□□ -1.34
SNHG1-223ENST00000545440 ASAH2BP0C7U1 165 aa6.67□□□□□ -1.34
SNHG1-223ENST00000545440 CECR9P0C854 216 aa6.67□□□□□ -1.34
SNHG1-223ENST00000545440 PF4V1P10720 104 aa6.67□□□□□ -1.34
SNHG1-223ENST00000545440 THRBP10828 461 aa6.67□□□□□ -1.34
SNHG1-223ENST00000545440 OSMP13725 252 aa6.67□□□□□ -1.34
SNHG1-223ENST00000545440 HLA-DOBP13765 273 aa6.67□□□□□ -1.34
SNHG1-223ENST00000545440 PTNP21246 168 aa6.67□□□□□ -1.34
SNHG1-223ENST00000545440 CBLP22681 906 aa6.67□□□□□ -1.34
SNHG1-223ENST00000545440 RBM34P42696 430 aaKnown RBP6.67□□□□□ -1.34
SNHG1-223ENST00000545440 TAS2R41P59536 307 aa6.67□□□□□ -1.34
SNHG1-223ENST00000545440 NAAAQ02083 359 aa6.67□□□□□ -1.34
SNHG1-223ENST00000545440 CLEC12BQ2HXU8 276 aa6.67□□□□□ -1.34
SNHG1-223ENST00000545440 CEACAM16Q2WEN9 425 aa6.67□□□□□ -1.34
SNHG1-223ENST00000545440 ZMAT1Q5H9K5 638 aa6.67□□□□□ -1.34
SNHG1-223ENST00000545440 NHLRC1Q6VVB1 395 aa6.67□□□□□ -1.34
SNHG1-223ENST00000545440 ZNF627Q7L945 461 aa6.67□□□□□ -1.34
SNHG1-223ENST00000545440 CARM1Q86X55 608 aa6.67□□□□□ -1.34
SNHG1-223ENST00000545440 RBM45Q8IUH3 476 aaKnown RBP6.67□□□□□ -1.34
SNHG1-223ENST00000545440 C20orf196Q8IYI0 205 aa6.67□□□□□ -1.34
SNHG1-223ENST00000545440 C10orf53Q8N6V4 93 aa6.67□□□□□ -1.34
SNHG1-223ENST00000545440 GCDHQ92947 438 aaPredicted RBP6.67□□□□□ -1.34
SNHG1-223ENST00000545440 RCN3Q96D15 328 aa6.67□□□□□ -1.34
SNHG1-223ENST00000545440 ADAD1Q96M93 576 aaKnown RBP6.67□□□□□ -1.34
SNHG1-223ENST00000545440 ZNF583Q96ND8 569 aa6.67□□□□□ -1.34
SNHG1-223ENST00000545440 KCNS3Q9BQ31 491 aa6.67□□□□□ -1.34
SNHG1-223ENST00000545440 PRSS27Q9BQR3 290 aa6.67□□□□□ -1.34
SNHG1-223ENST00000545440 C1QTNF6Q9BXI9 259 aa6.67□□□□□ -1.34
SNHG1-223ENST00000545440 CACNG6Q9BXT2 260 aa6.67□□□□□ -1.34
SNHG1-223ENST00000545440 TCF7L1Q9HCS4 588 aa6.67□□□□□ -1.34
SNHG1-223ENST00000545440 B3GAT2Q9NPZ5 323 aa6.67□□□□□ -1.34
SNHG1-223ENST00000545440 NANSQ9NR45 359 aa6.67□□□□□ -1.34
SNHG1-223ENST00000545440 MED29Q9NX70 200 aa6.67□□□□□ -1.34
SNHG1-223ENST00000545440 SH3GLB1Q9Y371 365 aa6.67□□□□□ -1.34
SNHG1-223ENST00000545440 LOC100653049A0A140TA62 436 aa6.66□□□□□ -1.34
SNHG1-223ENST00000545440 ELOVL7A1L3X0 281 aa6.66□□□□□ -1.34
SNHG1-223ENST00000545440 ZNF726A6NNF4 738 aa6.66□□□□□ -1.34
SNHG1-223ENST00000545440 M0R3G1 203 aa6.66□□□□□ -1.34
SNHG1-223ENST00000545440 KPNA4O00629 521 aaPredicted RBP6.66□□□□□ -1.34
SNHG1-223ENST00000545440 KRT34O76011 436 aa6.66□□□□□ -1.34
SNHG1-223ENST00000545440 OR6A2O95222 327 aa6.66□□□□□ -1.34
SNHG1-223ENST00000545440 LY6G6DO95868 133 aa6.66□□□□□ -1.34
SNHG1-223ENST00000545440 CH25HO95992 272 aa6.66□□□□□ -1.34
SNHG1-223ENST00000545440 MT-ND1P03886 318 aa6.66□□□□□ -1.34
SNHG1-223ENST00000545440 ADORA3P0DMS8 318 aa6.66□□□□□ -1.34
SNHG1-223ENST00000545440 CBR1P16152 277 aa6.66□□□□□ -1.34
SNHG1-223ENST00000545440 AHCYP23526 432 aa6.66□□□□□ -1.34
SNHG1-223ENST00000545440 APOBEC3AP31941 199 aaPredicted RBP6.66□□□□□ -1.34
SNHG1-223ENST00000545440 ARR3P36575 388 aa6.66□□□□□ -1.34
SNHG1-223ENST00000545440 ACVR1BP36896 505 aa6.66□□□□□ -1.34
SNHG1-223ENST00000545440 MTNR1BP49286 362 aa6.66□□□□□ -1.34
SNHG1-223ENST00000545440 FABP6P51161 128 aa6.66□□□□□ -1.34
SNHG1-223ENST00000545440 LINC00310P59036 64 aa6.66□□□□□ -1.34
SNHG1-223ENST00000545440 TUBA1BP68363 451 aa6.66□□□□□ -1.34
SNHG1-223ENST00000545440 TUBA4AP68366 448 aa6.66□□□□□ -1.34
SNHG1-223ENST00000545440 ARF1P84077 181 aaKnown RBP6.66□□□□□ -1.34
SNHG1-223ENST00000545440 CHRNB3Q05901 458 aa6.66□□□□□ -1.34
SNHG1-223ENST00000545440 ZP4Q12836 540 aa6.66□□□□□ -1.34
SNHG1-223ENST00000545440 SF3A3Q12874 501 aaKnown RBP eCLIP6.66□□□□□ -1.346e-19■■■□□ 14.9
SNHG1-223ENST00000545440 TNK1Q13470 666 aa6.66□□□□□ -1.34
SNHG1-223ENST00000545440 LRRC23Q53EV4 343 aaPredicted RBP6.66□□□□□ -1.34
SNHG1-223ENST00000545440 CYBRD1Q53TN4 286 aa6.66□□□□□ -1.34
SNHG1-223ENST00000545440 PHYHD1Q5SRE7 291 aa6.66□□□□□ -1.34
SNHG1-223ENST00000545440 TMEM200BQ69YZ2 307 aa6.66□□□□□ -1.34
SNHG1-223ENST00000545440 HACD2Q6Y1H2 254 aa6.66□□□□□ -1.34
SNHG1-223ENST00000545440 DEF8Q6ZN54 512 aa6.66□□□□□ -1.34
SNHG1-223ENST00000545440 TUBA1AQ71U36 451 aa6.66□□□□□ -1.34
SNHG1-223ENST00000545440 SLC46A3Q7Z3Q1 461 aa6.66□□□□□ -1.34
SNHG1-223ENST00000545440 HDDC2Q7Z4H3 204 aa6.66□□□□□ -1.34
SNHG1-223ENST00000545440 NANOGNBQ7Z5D8 188 aa6.66□□□□□ -1.34
SNHG1-223ENST00000545440 MICU2Q8IYU8 434 aa6.66□□□□□ -1.34
SNHG1-223ENST00000545440 POU5F2Q8N7G0 328 aa6.66□□□□□ -1.34
SNHG1-223ENST00000545440 NUP37Q8NFH4 326 aa6.66□□□□□ -1.34
SNHG1-223ENST00000545440 OR6X1Q8NH79 312 aa6.66□□□□□ -1.34
SNHG1-223ENST00000545440 PRRC1Q96M27 445 aa6.66□□□□□ -1.34
SNHG1-223ENST00000545440 SYT3Q9BQG1 590 aa6.66□□□□□ -1.34
SNHG1-223ENST00000545440 ULBP2Q9BZM5 246 aa6.66□□□□□ -1.34
SNHG1-223ENST00000545440 ZNF442Q9H7R0 627 aa6.66□□□□□ -1.34
SNHG1-223ENST00000545440 MEPEQ9NQ76 525 aaPredicted RBP6.66□□□□□ -1.34
SNHG1-223ENST00000545440 CA10Q9NS85 328 aa6.66□□□□□ -1.34
SNHG1-223ENST00000545440 CDC42EP3Q9UKI2 254 aa6.66□□□□□ -1.34
SNHG1-223ENST00000545440 USP22Q9UPT9 525 aa6.66□□□□□ -1.34
SNHG1-223ENST00000545440 MOKQ9UQ07 419 aa6.66□□□□□ -1.34
SNHG1-223ENST00000545440 NIPBLQ6KC79 2804 aaeCLIP6.65□□□□□ -1.348e-27■■■■□ 21.5
SNHG1-223ENST00000545440 HTR3EA5X5Y0 456 aa6.65□□□□□ -1.34
SNHG1-223ENST00000545440 C9orf118A6NHY6 69 aa6.65□□□□□ -1.34
SNHG1-223ENST00000545440 NPIPB13A6NJU9 1138 aa6.65□□□□□ -1.34
SNHG1-223ENST00000545440 CENPBD1B2RD01 187 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms