RNA–Protein interactions for RNA: ENST00000543545.5

CPSF7-221, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 5

Gene CPSF7, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-221	ENST00000543545	PCYT1A	P49585	367 aa		8.94	□□□□□ -0.98
CPSF7-221	ENST00000543545	RPS7	P62081	194 aa	Known RBP	8.94	□□□□□ -0.98
CPSF7-221	ENST00000543545	STK11	Q15831	433 aa		8.94	□□□□□ -0.98
CPSF7-221	ENST00000543545	ETFDH	Q16134	617 aa		8.94	□□□□□ -0.98
CPSF7-221	ENST00000543545	KLHL12	Q53G59	568 aa		8.94	□□□□□ -0.98
CPSF7-221	ENST00000543545	SFRP5	Q5T4F7	317 aa		8.94	□□□□□ -0.98
CPSF7-221	ENST00000543545	TTC23	Q5W5X9	447 aa		8.94	□□□□□ -0.98
CPSF7-221	ENST00000543545	C12orf73	Q69YU5	71 aa		8.94	□□□□□ -0.98
CPSF7-221	ENST00000543545	PLBD1	Q6P4A8	553 aa		8.94	□□□□□ -0.98
CPSF7-221	ENST00000543545	SLC25A47	Q6Q0C1	308 aa		8.94	□□□□□ -0.98
CPSF7-221	ENST00000543545	IZUMO2	Q6UXV1	221 aa		8.94	□□□□□ -0.98
CPSF7-221	ENST00000543545	STAC2	Q6ZMT1	411 aa		8.94	□□□□□ -0.98
CPSF7-221	ENST00000543545	ZNF813	Q6ZN06	617 aa		8.94	□□□□□ -0.98
CPSF7-221	ENST00000543545	CXXC5	Q7LFL8	322 aa	Known RBP	8.94	□□□□□ -0.98
CPSF7-221	ENST00000543545	ZSCAN2	Q7Z7L9	614 aa	Predicted RBP	8.94	□□□□□ -0.98
CPSF7-221	ENST00000543545	CPO	Q8IVL8	374 aa		8.94	□□□□□ -0.98
CPSF7-221	ENST00000543545	DEPDC4	Q8N2C3	294 aa		8.94	□□□□□ -0.98
CPSF7-221	ENST00000543545	ZNF433	Q8N7K0	673 aa	Predicted RBP	8.94	□□□□□ -0.98
CPSF7-221	ENST00000543545	NPEPL1	Q8NDH3	523 aa		8.94	□□□□□ -0.98
CPSF7-221	ENST00000543545	STEAP2	Q8NFT2	490 aa		8.94	□□□□□ -0.98
CPSF7-221	ENST00000543545	OR2T4	Q8NH00	348 aa		8.94	□□□□□ -0.98
CPSF7-221	ENST00000543545	ZNF837	Q96EG3	531 aa	Predicted RBP	8.94	□□□□□ -0.98
CPSF7-221	ENST00000543545	FOXN4	Q96NZ1	517 aa		8.94	□□□□□ -0.98
CPSF7-221	ENST00000543545	SNX18	Q96RF0	628 aa		8.94	□□□□□ -0.98
CPSF7-221	ENST00000543545	FOXB1	Q99853	325 aa		8.94	□□□□□ -0.98
CPSF7-221	ENST00000543545	APOL4	Q9BPW4	351 aa		8.94	□□□□□ -0.98
CPSF7-221	ENST00000543545	RASSF4	Q9H2L5	321 aa		8.94	□□□□□ -0.98
CPSF7-221	ENST00000543545	MED20	Q9H944	212 aa		8.94	□□□□□ -0.98
CPSF7-221	ENST00000543545	B9D1	Q9UPM9	204 aa		8.94	□□□□□ -0.98
CPSF7-221	ENST00000543545	COA3	Q9Y2R0	106 aa	Predicted RBP	8.94	□□□□□ -0.98
CPSF7-221	ENST00000543545	IGKV1D-43	A0A0B4J1Z2	117 aa		8.93	□□□□□ -0.98
CPSF7-221	ENST00000543545	WIPF3	A6NGB9	483 aa		8.93	□□□□□ -0.98
CPSF7-221	ENST00000543545	ZNF99	A8MXY4	864 aa	Predicted RBP	8.93	□□□□□ -0.98
CPSF7-221	ENST00000543545	RPL36A-HNRNPH2	H7BZ11	118 aa		8.93	□□□□□ -0.98
CPSF7-221	ENST00000543545	PRKY	O43930	277 aa		8.93	□□□□□ -0.98
CPSF7-221	ENST00000543545	FARS2	O95363	451 aa	Known RBP	8.93	□□□□□ -0.98
CPSF7-221	ENST00000543545	GYPB	P06028	91 aa		8.93	□□□□□ -0.98
CPSF7-221	ENST00000543545	ITGA5	P08648	1049 aa		8.93	□□□□□ -0.98
CPSF7-221	ENST00000543545	RNF224	P0DH78	156 aa		8.93	□□□□□ -0.98
CPSF7-221	ENST00000543545	B4GALT1	P15291	398 aa		8.93	□□□□□ -0.98
CPSF7-221	ENST00000543545	CTLA4	P16410	223 aa		8.93	□□□□□ -0.98
CPSF7-221	ENST00000543545	NPR2	P20594	1047 aa		8.93	□□□□□ -0.98
CPSF7-221	ENST00000543545	CDA	P32320	146 aa		8.93	□□□□□ -0.98
CPSF7-221	ENST00000543545	PYCR1	P32322	319 aa		8.93	□□□□□ -0.98
CPSF7-221	ENST00000543545	UGT2B10	P36537	528 aa		8.93	□□□□□ -0.98
CPSF7-221	ENST00000543545	SLC25A1	P53007	311 aa		8.93	□□□□□ -0.98
CPSF7-221	ENST00000543545	AQP4	P55087	323 aa		8.93	□□□□□ -0.98
CPSF7-221	ENST00000543545	SH3BGR	P55822	239 aa	Predicted RBP	8.93	□□□□□ -0.98
CPSF7-221	ENST00000543545	UBE2N	P61088	152 aa	Known RBP	8.93	□□□□□ -0.98
CPSF7-221	ENST00000543545	IL5RA	Q01344	420 aa		8.93	□□□□□ -0.98
CPSF7-221	ENST00000543545	SRSF1	Q07955	248 aa	Known RBP eCLIP	8.93	□□□□□ -0.98
CPSF7-221	ENST00000543545	DBP	Q10586	325 aa	Predicted RBP	8.93	□□□□□ -0.98
CPSF7-221	ENST00000543545	SNTB1	Q13884	538 aa	Known RBP	8.93	□□□□□ -0.98
CPSF7-221	ENST00000543545	HIST3H3	Q16695	136 aa		8.93	□□□□□ -0.98
CPSF7-221	ENST00000543545	ZNF362	Q5T0B9	420 aa	Predicted RBP	8.93	□□□□□ -0.98
CPSF7-221	ENST00000543545	OR7E24	Q6IFN5	339 aa		8.93	□□□□□ -0.98
CPSF7-221	ENST00000543545	ANKRD16	Q6P6B7	361 aa		8.93	□□□□□ -0.98
CPSF7-221	ENST00000543545	KLHL24	Q6TFL4	600 aa		8.93	□□□□□ -0.98
CPSF7-221	ENST00000543545	OR6V1	Q8N148	313 aa		8.93	□□□□□ -0.98
CPSF7-221	ENST00000543545	OR51L1	Q8NGJ5	315 aa		8.93	□□□□□ -0.98
CPSF7-221	ENST00000543545	OR8J1	Q8NGP2	316 aa		8.93	□□□□□ -0.98
CPSF7-221	ENST00000543545	OR1K1	Q8NGR3	316 aa		8.93	□□□□□ -0.98
CPSF7-221	ENST00000543545	OR6K6	Q8NGW6	343 aa		8.93	□□□□□ -0.98
CPSF7-221	ENST00000543545	TMEM163	Q8TC26	289 aa		8.93	□□□□□ -0.98
CPSF7-221	ENST00000543545	UBE2F	Q969M7	185 aa		8.93	□□□□□ -0.98
CPSF7-221	ENST00000543545	NMD3	Q96D46	503 aa	Known RBP	8.93	□□□□□ -0.98
CPSF7-221	ENST00000543545	HRASLS5	Q96KN8	279 aa		8.93	□□□□□ -0.98
CPSF7-221	ENST00000543545	ADI1	Q9BV57	179 aa		8.93	□□□□□ -0.98
CPSF7-221	ENST00000543545	KCNN2	Q9H2S1	579 aa		8.93	□□□□□ -0.98
CPSF7-221	ENST00000543545	RASSF1	Q9NS23	344 aa		8.93	□□□□□ -0.98
CPSF7-221	ENST00000543545	NDRG4	Q9ULP0	352 aa	Known RBP	8.93	□□□□□ -0.98
CPSF7-221	ENST00000543545	POLR1D	Q9Y2S0	133 aa		8.93	□□□□□ -0.98
CPSF7-221	ENST00000543545	FKBP7	Q9Y680	259 aa		8.93	□□□□□ -0.98
CPSF7-221	ENST00000543545	ALPK2	Q86TB3	2170 aa		8.92	□□□□□ -0.98
CPSF7-221	ENST00000543545	KIAA1549	Q9HCM3	1950 aa		8.92	□□□□□ -0.98
CPSF7-221	ENST00000543545		A1L4Q6	167 aa		8.92	□□□□□ -0.98
CPSF7-221	ENST00000543545	PRSS44	E7EML9	344 aa		8.92	□□□□□ -0.98
CPSF7-221	ENST00000543545		H0YAE9	185 aa		8.92	□□□□□ -0.98
CPSF7-221	ENST00000543545		H0YJX3	145 aa		8.92	□□□□□ -0.98
CPSF7-221	ENST00000543545	DCTN6	O00399	190 aa		8.92	□□□□□ -0.98
CPSF7-221	ENST00000543545	DLGAP1	O14490	977 aa		8.92	□□□□□ -0.98
CPSF7-221	ENST00000543545	SLC16A6	O15403	523 aa		8.92	□□□□□ -0.98
CPSF7-221	ENST00000543545	OR8G3P	P0DMU2	310 aa		8.92	□□□□□ -0.98
CPSF7-221	ENST00000543545	CLU	P10909	449 aa		8.92	□□□□□ -0.98
CPSF7-221	ENST00000543545	CD79A	P11912	226 aa		8.92	□□□□□ -0.98
CPSF7-221	ENST00000543545	SPI1	P17947	270 aa		8.92	□□□□□ -0.98
CPSF7-221	ENST00000543545	PSMB1	P20618	241 aa	Known RBP	8.92	□□□□□ -0.98
CPSF7-221	ENST00000543545	COX5A	P20674	150 aa		8.92	□□□□□ -0.98
CPSF7-221	ENST00000543545	GRN	P28799	593 aa	Known RBP	8.92	□□□□□ -0.98
CPSF7-221	ENST00000543545	LAP3	P28838	519 aa		8.92	□□□□□ -0.98
CPSF7-221	ENST00000543545	CAPG	P40121	348 aa		8.92	□□□□□ -0.98
CPSF7-221	ENST00000543545	HSPA13	P48723	471 aa		8.92	□□□□□ -0.98
CPSF7-221	ENST00000543545	GLO1	Q04760	184 aa		8.92	□□□□□ -0.98
CPSF7-221	ENST00000543545	KEAP1	Q14145	624 aa		8.92	□□□□□ -0.98
CPSF7-221	ENST00000543545	GABRA6	Q16445	453 aa		8.92	□□□□□ -0.98
CPSF7-221	ENST00000543545	FBXL19-AS1	Q494R0	122 aa		8.92	□□□□□ -0.98
CPSF7-221	ENST00000543545	HIKESHI	Q53FT3	197 aa		8.92	□□□□□ -0.98
CPSF7-221	ENST00000543545	C10orf128	Q5T292	105 aa		8.92	□□□□□ -0.98
CPSF7-221	ENST00000543545	C6orf52	Q5T4I8	152 aa		8.92	□□□□□ -0.98
CPSF7-221	ENST00000543545	GLB1L2	Q8IW92	636 aa		8.92	□□□□□ -0.98

Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms