RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 MAP3K15Q6ZN16 1313 aa3.19□□□□□ -1.9
SFSWAP-211ENST00000542813 CCDC88AQ3V6T2 1871 aa3.18□□□□□ -1.9
SFSWAP-211ENST00000542813 LOC100131303A0A0U1RQF7 123 aa3.18□□□□□ -1.9
SFSWAP-211ENST00000542813 FOXI3A8MTJ6 420 aaPredicted RBP3.18□□□□□ -1.9
SFSWAP-211ENST00000542813 C12orf71A8MTZ7 269 aa3.18□□□□□ -1.9
SFSWAP-211ENST00000542813 SERPINE3A8MV23 424 aa3.18□□□□□ -1.9
SFSWAP-211ENST00000542813 B4DXG7 233 aa3.18□□□□□ -1.9
SFSWAP-211ENST00000542813 HSBP1L1C9JCN9 74 aa3.18□□□□□ -1.9
SFSWAP-211ENST00000542813 SULT2B1O00204 365 aa3.18□□□□□ -1.9
SFSWAP-211ENST00000542813 PSMD11O00231 422 aa3.18□□□□□ -1.9
SFSWAP-211ENST00000542813 AIM2O14862 343 aa3.18□□□□□ -1.9
SFSWAP-211ENST00000542813 RAB29O14966 203 aa3.18□□□□□ -1.9
SFSWAP-211ENST00000542813 POLR1CO15160 346 aaPredicted RBP3.18□□□□□ -1.9
SFSWAP-211ENST00000542813 CHST1O43916 411 aa3.18□□□□□ -1.9
SFSWAP-211ENST00000542813 SNAP91O60641 907 aa3.18□□□□□ -1.9
SFSWAP-211ENST00000542813 HUS1O60921 280 aa3.18□□□□□ -1.9
SFSWAP-211ENST00000542813 OR7A10O76100 309 aa3.18□□□□□ -1.9
SFSWAP-211ENST00000542813 TSPAN13O95857 204 aa3.18□□□□□ -1.9
SFSWAP-211ENST00000542813 KRT16P08779 473 aa3.18□□□□□ -1.9
SFSWAP-211ENST00000542813 UBCP0CG48 685 aaKnown RBP3.18□□□□□ -1.9
SFSWAP-211ENST00000542813 MYL2P10916 166 aa3.18□□□□□ -1.9
SFSWAP-211ENST00000542813 NQO1P15559 274 aaKnown RBP3.18□□□□□ -1.9
SFSWAP-211ENST00000542813 ABOP16442 354 aa3.18□□□□□ -1.9
SFSWAP-211ENST00000542813 M6PRP20645 277 aa3.18□□□□□ -1.9
SFSWAP-211ENST00000542813 ZNF10P21506 573 aaPredicted RBP3.18□□□□□ -1.9
SFSWAP-211ENST00000542813 IL32P24001 234 aa3.18□□□□□ -1.9
SFSWAP-211ENST00000542813 HSPA9P38646 679 aaKnown RBP3.18□□□□□ -1.9
SFSWAP-211ENST00000542813 VHLP40337 213 aa3.18□□□□□ -1.9
SFSWAP-211ENST00000542813 OR1D4P47884 311 aa3.18□□□□□ -1.9
SFSWAP-211ENST00000542813 TUFMP49411 452 aaKnown RBP3.18□□□□□ -1.9
SFSWAP-211ENST00000542813 KPNA2P52292 529 aaKnown RBP3.18□□□□□ -1.9
SFSWAP-211ENST00000542813 EFNA3P52797 238 aa3.18□□□□□ -1.9
SFSWAP-211ENST00000542813 BLVRAP53004 296 aa3.18□□□□□ -1.9
SFSWAP-211ENST00000542813 HMGCS2P54868 508 aa3.18□□□□□ -1.9
SFSWAP-211ENST00000542813 DLX5P56178 289 aa3.18□□□□□ -1.9
SFSWAP-211ENST00000542813 DSTNP60981 165 aa3.18□□□□□ -1.9
SFSWAP-211ENST00000542813 RPS14P62263 151 aaKnown RBP3.18□□□□□ -1.9
SFSWAP-211ENST00000542813 GNB1P62873 340 aa3.18□□□□□ -1.9
SFSWAP-211ENST00000542813 SELENBP1Q13228 472 aa3.18□□□□□ -1.9
SFSWAP-211ENST00000542813 GRB7Q14451 532 aa3.18□□□□□ -1.9
SFSWAP-211ENST00000542813 KCNJ11Q14654 390 aa3.18□□□□□ -1.9
SFSWAP-211ENST00000542813 GNMTQ14749 295 aa3.18□□□□□ -1.9
SFSWAP-211ENST00000542813 OXA1LQ15070 435 aa3.18□□□□□ -1.9
SFSWAP-211ENST00000542813 SIX1Q15475 284 aaPredicted RBP3.18□□□□□ -1.9
SFSWAP-211ENST00000542813 MAPRE2Q15555 327 aa3.18□□□□□ -1.9
SFSWAP-211ENST00000542813 FAM83EQ2M2I3 478 aa3.18□□□□□ -1.9
SFSWAP-211ENST00000542813 BEX5Q5H9J7 111 aa3.18□□□□□ -1.9
SFSWAP-211ENST00000542813 SLC25A25Q6KCM7 469 aa3.18□□□□□ -1.9
SFSWAP-211ENST00000542813 REEP3Q6NUK4 255 aa3.18□□□□□ -1.9
SFSWAP-211ENST00000542813 EMBQ6PCB8 327 aa3.18□□□□□ -1.9
SFSWAP-211ENST00000542813 RFWD3Q6PCD5 774 aa3.18□□□□□ -1.9
SFSWAP-211ENST00000542813 Q6ZSR3 168 aa3.18□□□□□ -1.9
SFSWAP-211ENST00000542813 SLC25A48Q6ZT89 311 aaKnown RBP3.18□□□□□ -1.9
SFSWAP-211ENST00000542813 SLC51BQ86UW2 128 aa3.18□□□□□ -1.9
SFSWAP-211ENST00000542813 CSNK1A1LQ8N752 337 aa3.18□□□□□ -1.9
SFSWAP-211ENST00000542813 OR7G1Q8NGA0 311 aa3.18□□□□□ -1.9
SFSWAP-211ENST00000542813 OR5T3Q8NGG3 340 aa3.18□□□□□ -1.9
SFSWAP-211ENST00000542813 ZNF596Q8TC21 504 aa3.18□□□□□ -1.9
SFSWAP-211ENST00000542813 NR4A3Q92570 626 aa3.18□□□□□ -1.9
SFSWAP-211ENST00000542813 HAUS1Q96CS2 278 aa3.18□□□□□ -1.9
SFSWAP-211ENST00000542813 ASB9Q96DX5 294 aa3.18□□□□□ -1.9
SFSWAP-211ENST00000542813 MS4A14Q96JA4 679 aa3.18□□□□□ -1.9
SFSWAP-211ENST00000542813 ZNF317Q96PQ6 595 aaPredicted RBP3.18□□□□□ -1.9
SFSWAP-211ENST00000542813 TBX15Q96SF7 602 aa3.18□□□□□ -1.9
SFSWAP-211ENST00000542813 ATP5SQ99766 215 aa3.18□□□□□ -1.9
SFSWAP-211ENST00000542813 RIOK1Q9BRS2 568 aaKnown RBP3.18□□□□□ -1.9
SFSWAP-211ENST00000542813 NDEL1Q9GZM8 345 aa3.18□□□□□ -1.9
SFSWAP-211ENST00000542813 NEUROG2Q9H2A3 272 aa3.18□□□□□ -1.9
SFSWAP-211ENST00000542813 AMBNQ9NP70 447 aa3.18□□□□□ -1.9
SFSWAP-211ENST00000542813 GPATCH2LQ9NWQ4 482 aa3.18□□□□□ -1.9
SFSWAP-211ENST00000542813 TMEM181Q9P2C4 612 aa3.18□□□□□ -1.9
SFSWAP-211ENST00000542813 ANGPTL2Q9UKU9 493 aa3.18□□□□□ -1.9
SFSWAP-211ENST00000542813 SNX12Q9UMY4 172 aa3.18□□□□□ -1.9
SFSWAP-211ENST00000542813 RNF24Q9Y225 148 aa3.18□□□□□ -1.9
SFSWAP-211ENST00000542813 MYH13Q9UKX3 1938 aa3.18□□□□□ -1.9
SFSWAP-211ENST00000542813 PKD1L2Q7Z442 2459 aa3.18□□□□□ -1.9
SFSWAP-211ENST00000542813 RIC1Q4ADV7 1423 aa3.18□□□□□ -1.9
SFSWAP-211ENST00000542813 KDM3BQ7LBC6 1761 aa3.17□□□□□ -1.9
SFSWAP-211ENST00000542813 PAPPA2Q9BXP8 1791 aa3.17□□□□□ -1.9
SFSWAP-211ENST00000542813 NSG1A0A0A6YYJ2 146 aa3.17□□□□□ -1.9
SFSWAP-211ENST00000542813 OR5B21A6NL26 309 aa3.17□□□□□ -1.9
SFSWAP-211ENST00000542813 E7EWF7 191 aa3.17□□□□□ -1.9
SFSWAP-211ENST00000542813 E9PLD3 99 aa3.17□□□□□ -1.9
SFSWAP-211ENST00000542813 GFYI3L273 518 aa3.17□□□□□ -1.9
SFSWAP-211ENST00000542813 SIRPB1O00241 398 aa3.17□□□□□ -1.9
SFSWAP-211ENST00000542813 GOSR2O14653 212 aa3.17□□□□□ -1.9
SFSWAP-211ENST00000542813 CETN3O15182 167 aa3.17□□□□□ -1.9
SFSWAP-211ENST00000542813 RRP8O43159 456 aaKnown RBP3.17□□□□□ -1.9
SFSWAP-211ENST00000542813 SULT1B1O43704 296 aa3.17□□□□□ -1.9
SFSWAP-211ENST00000542813 HCN1O60741 890 aa3.17□□□□□ -1.9
SFSWAP-211ENST00000542813 SCRG1O75711 98 aa3.17□□□□□ -1.9
SFSWAP-211ENST00000542813 CABYRO75952 493 aa3.17□□□□□ -1.9
SFSWAP-211ENST00000542813 CLPXO76031 633 aa3.17□□□□□ -1.9
SFSWAP-211ENST00000542813 APOA1P02647 267 aa3.17□□□□□ -1.9
SFSWAP-211ENST00000542813 SERPINE2P07093 398 aa3.17□□□□□ -1.9
SFSWAP-211ENST00000542813 H2AFZP0C0S5 128 aa3.17□□□□□ -1.9
SFSWAP-211ENST00000542813 ZSCAN5DPP0CG00 497 aa3.17□□□□□ -1.9
SFSWAP-211ENST00000542813 CTRB1P17538 263 aa3.17□□□□□ -1.9
SFSWAP-211ENST00000542813 BCKDHBP21953 392 aa3.17□□□□□ -1.9
SFSWAP-211ENST00000542813 IDSP22304 550 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms