RNA–Protein interactions for RNA: ENST00000542244.5

DDX11-220, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best)

Gene DDX11, Length 1,193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-220ENST00000542244 DENND2DQ9H6A0 471 aaPredicted RBP16.98■□□□□ 0.31
DDX11-220ENST00000542244 TRIM33Q9UPN9 1127 aa16.98■□□□□ 0.31
DDX11-220ENST00000542244 MT-ND1P03886 318 aa16.97■□□□□ 0.31
DDX11-220ENST00000542244 HIST1H2ABP04908 130 aa16.97■□□□□ 0.31
DDX11-220ENST00000542244 SAGP10523 405 aaPredicted RBP16.97■□□□□ 0.31
DDX11-220ENST00000542244 SRP14P37108 136 aaKnown RBP16.97■□□□□ 0.31
DDX11-220ENST00000542244 CLRN1P58418 232 aa16.97■□□□□ 0.31
DDX11-220ENST00000542244 CCL8P80075 99 aa16.97■□□□□ 0.31
DDX11-220ENST00000542244 ARMC4Q5T2S8 1044 aa16.97■□□□□ 0.31
DDX11-220ENST00000542244 AVPI1Q5T686 147 aa16.97■□□□□ 0.31
DDX11-220ENST00000542244 RGS7BPQ6MZT1 257 aaPredicted RBP16.97■□□□□ 0.31
DDX11-220ENST00000542244 CGB2Q6NT52 195 aa16.97■□□□□ 0.31
DDX11-220ENST00000542244 C1orf229Q6ZS94 237 aaPredicted RBP16.97■□□□□ 0.31
DDX11-220ENST00000542244 HIST3H2AQ7L7L0 130 aa16.97■□□□□ 0.31
DDX11-220ENST00000542244 SLC16A14Q7RTX9 510 aa16.97■□□□□ 0.31
DDX11-220ENST00000542244 SNX32Q86XE0 403 aa16.97■□□□□ 0.31
DDX11-220ENST00000542244 TSPEARQ8WU66 669 aa16.97■□□□□ 0.31
DDX11-220ENST00000542244 HIST1H2ACQ93077 130 aa16.97■□□□□ 0.31
DDX11-220ENST00000542244 ZNF583Q96ND8 569 aa16.97■□□□□ 0.31
DDX11-220ENST00000542244 SLC19A3Q9BZV2 496 aa16.97■□□□□ 0.31
DDX11-220ENST00000542244 RIMS3Q9UJD0 308 aa16.97■□□□□ 0.31
DDX11-220ENST00000542244 IGLV3-9A0A075B6K5 115 aa16.96■□□□□ 0.31
DDX11-220ENST00000542244 PPIHO43447 177 aaKnown RBP16.96■□□□□ 0.31
DDX11-220ENST00000542244 MGRN1O60291 552 aa16.96■□□□□ 0.31
DDX11-220ENST00000542244 RGS9O75916 674 aaPredicted RBP16.96■□□□□ 0.31
DDX11-220ENST00000542244 SASH3O75995 380 aa16.96■□□□□ 0.31
DDX11-220ENST00000542244 VENTXO95231 258 aa16.96■□□□□ 0.31
DDX11-220ENST00000542244 AVPP01185 164 aa16.96■□□□□ 0.31
DDX11-220ENST00000542244 IGHG1P01857 330 aa16.96■□□□□ 0.31
DDX11-220ENST00000542244 LCKP06239 509 aa16.96■□□□□ 0.31
DDX11-220ENST00000542244 ZNF250P15622 560 aa16.96■□□□□ 0.31
DDX11-220ENST00000542244 ACADSP16219 412 aa16.96■□□□□ 0.31
DDX11-220ENST00000542244 ACHEP22303 614 aa16.96■□□□□ 0.31
DDX11-220ENST00000542244 SPRNQ5BIV9 151 aa16.96■□□□□ 0.31
DDX11-220ENST00000542244 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.96■□□□□ 0.31
DDX11-220ENST00000542244 ICA1LQ8NDH6 482 aa16.96■□□□□ 0.31
DDX11-220ENST00000542244 NABP1Q96AH0 204 aa16.96■□□□□ 0.31
DDX11-220ENST00000542244 LRRC58Q96CX6 371 aa16.96■□□□□ 0.31
DDX11-220ENST00000542244 SGTBQ96EQ0 304 aa16.96■□□□□ 0.31
DDX11-220ENST00000542244 CDH20Q9HBT6 801 aa16.96■□□□□ 0.31
DDX11-220ENST00000542244 HIF1ANQ9NWT6 349 aa16.96■□□□□ 0.31
DDX11-220ENST00000542244 C17orf100A8MU93 164 aa16.95■□□□□ 0.3
DDX11-220ENST00000542244 HMGB1P1B2RPK0 211 aaPredicted RBP16.95■□□□□ 0.3
DDX11-220ENST00000542244 B4DSR2 109 aa16.95■□□□□ 0.3
DDX11-220ENST00000542244 TSPAN19P0C672 248 aa16.95■□□□□ 0.3
DDX11-220ENST00000542244 GAAP10253 952 aa16.95■□□□□ 0.3
DDX11-220ENST00000542244 WNT5AP41221 380 aa16.95■□□□□ 0.3
DDX11-220ENST00000542244 ZNF133P52736 654 aaPredicted RBP16.95■□□□□ 0.3
DDX11-220ENST00000542244 UCP2P55851 309 aa16.95■□□□□ 0.3
DDX11-220ENST00000542244 TAS2R41P59536 307 aa16.95■□□□□ 0.3
DDX11-220ENST00000542244 RPS23P62266 143 aaKnown RBP16.95■□□□□ 0.3
DDX11-220ENST00000542244 NKPD1Q17RQ9 610 aa16.95■□□□□ 0.3
DDX11-220ENST00000542244 PABPC1L2AQ5JQF8 200 aa16.95■□□□□ 0.3
DDX11-220ENST00000542244 SPATA46Q5T0L3 261 aa16.95■□□□□ 0.3
DDX11-220ENST00000542244 REP15Q6BDI9 236 aa16.95■□□□□ 0.3
DDX11-220ENST00000542244 TMEM53Q6P2H8 277 aa16.95■□□□□ 0.3
DDX11-220ENST00000542244 THSD4Q6ZMP0 1018 aa16.95■□□□□ 0.3
DDX11-220ENST00000542244 SLC30A8Q8IWU4 369 aa16.95■□□□□ 0.3
DDX11-220ENST00000542244 ZNF101Q8IZC7 436 aa16.95■□□□□ 0.3
DDX11-220ENST00000542244 RBM15BQ8NDT2 890 aaKnown RBP16.95■□□□□ 0.3
DDX11-220ENST00000542244 SYNPRQ8TBG9 265 aa16.95■□□□□ 0.3
DDX11-220ENST00000542244 NSMAFQ92636 917 aa16.95■□□□□ 0.3
DDX11-220ENST00000542244 METTL17Q9H7H0 456 aaPredicted RBP16.95■□□□□ 0.3
DDX11-220ENST00000542244 HINT3Q9NQE9 182 aaKnown RBP16.95■□□□□ 0.3
DDX11-220ENST00000542244 INIPQ9NRY2 104 aa16.95■□□□□ 0.3
DDX11-220ENST00000542244 LOC100509620A0A075B734 347 aa16.94■□□□□ 0.3
DDX11-220ENST00000542244 TCF21O43680 179 aa16.94■□□□□ 0.3
DDX11-220ENST00000542244 MPV17P39210 176 aa16.94■□□□□ 0.3
DDX11-220ENST00000542244 MVKQ03426 396 aa16.94■□□□□ 0.3
DDX11-220ENST00000542244 KLF10Q13118 480 aa16.94■□□□□ 0.3
DDX11-220ENST00000542244 INTS11Q5TA45 600 aaKnown RBP16.94■□□□□ 0.3
DDX11-220ENST00000542244 IGFN1Q86VF2 1251 aa16.94■□□□□ 0.3
DDX11-220ENST00000542244 AKR7LQ8NHP1 331 aa16.94■□□□□ 0.3
DDX11-220ENST00000542244 C10orf82Q8WW14 230 aa16.94■□□□□ 0.3
DDX11-220ENST00000542244 TMEM239Q8WW34 195 aa16.94■□□□□ 0.3
DDX11-220ENST00000542244 TMEM186Q96B77 213 aa16.94■□□□□ 0.3
DDX11-220ENST00000542244 FBXL3Q9UKT7 428 aa16.94■□□□□ 0.3
DDX11-220ENST00000542244 SNX13Q9Y5W8 968 aa16.94■□□□□ 0.3
DDX11-220ENST00000542244 NBEAL1Q6ZS30 2694 aa16.94■□□□□ 0.3
DDX11-220ENST00000542244 A0A1W2PRG6 482 aa16.93■□□□□ 0.3
DDX11-220ENST00000542244 MCIDASD6RGH6 385 aa16.93■□□□□ 0.3
DDX11-220ENST00000542244 FARS2O95363 451 aaKnown RBP16.93■□□□□ 0.3
DDX11-220ENST00000542244 SCG5P05408 212 aa16.93■□□□□ 0.3
DDX11-220ENST00000542244 MSMBP08118 114 aa16.93■□□□□ 0.3
DDX11-220ENST00000542244 ZNF32P17041 273 aa16.93■□□□□ 0.3
DDX11-220ENST00000542244 YAP1P46937 504 aaKnown RBP16.93■□□□□ 0.3
DDX11-220ENST00000542244 KLF3P57682 345 aaPredicted RBP16.93■□□□□ 0.3
DDX11-220ENST00000542244 TOP3AQ13472 1001 aaPredicted RBP16.93■□□□□ 0.3
DDX11-220ENST00000542244 FHL1Q13642 323 aa16.93■□□□□ 0.3
DDX11-220ENST00000542244 TSTQ16762 297 aaKnown RBP16.93■□□□□ 0.3
DDX11-220ENST00000542244 SLC36A2Q495M3 483 aa16.93■□□□□ 0.3
DDX11-220ENST00000542244 C10orf128Q5T292 105 aa16.93■□□□□ 0.3
DDX11-220ENST00000542244 SLC25A47Q6Q0C1 308 aa16.93■□□□□ 0.3
DDX11-220ENST00000542244 ZNF771Q7L3S4 317 aaPredicted RBP16.93■□□□□ 0.3
DDX11-220ENST00000542244 GLCCI1Q86VQ1 547 aa16.93■□□□□ 0.3
DDX11-220ENST00000542244 RFLNBQ8N5W9 214 aa16.93■□□□□ 0.3
DDX11-220ENST00000542244 ZNF519Q8TB69 540 aa16.93■□□□□ 0.3
DDX11-220ENST00000542244 LRRC37BQ96QE4 947 aa16.93■□□□□ 0.3
DDX11-220ENST00000542244 LOC100653049A0A140TA62 436 aa16.92■□□□□ 0.3
DDX11-220ENST00000542244 MRASO14807 208 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms