RNA–Protein interactions for RNA: ENST00000540804.5

MSRB3-209, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 2 BASIC

Gene MSRB3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-209ENST00000540804 TPD52L3Q96J77 140 aa12.41□□□□□ -0.42
MSRB3-209ENST00000540804 SIKE1Q9BRV8 207 aa12.41□□□□□ -0.42
MSRB3-209ENST00000540804 INIPQ9NRY2 104 aa12.41□□□□□ -0.42
MSRB3-209ENST00000540804 ARGLU1Q9NWB6 273 aaPredicted RBP12.41□□□□□ -0.42
MSRB3-209ENST00000540804 SLC7A8Q9UHI5 535 aa12.41□□□□□ -0.42
MSRB3-209ENST00000540804 A0A1W2PPW3 197 aa12.4□□□□□ -0.42
MSRB3-209ENST00000540804 A0A1W2PRG6 482 aa12.4□□□□□ -0.42
MSRB3-209ENST00000540804 MCIDASD6RGH6 385 aa12.4□□□□□ -0.42
MSRB3-209ENST00000540804 J3KTA2 159 aa12.4□□□□□ -0.42
MSRB3-209ENST00000540804 OR5F1O95221 314 aa12.4□□□□□ -0.42
MSRB3-209ENST00000540804 ACADSP16219 412 aa12.4□□□□□ -0.42
MSRB3-209ENST00000540804 ARMC4Q5T2S8 1044 aa12.4□□□□□ -0.42
MSRB3-209ENST00000540804 IGFN1Q86VF2 1251 aa12.4□□□□□ -0.42
MSRB3-209ENST00000540804 MICU2Q8IYU8 434 aa12.4□□□□□ -0.42
MSRB3-209ENST00000540804 POU5F2Q8N7G0 328 aa12.4□□□□□ -0.42
MSRB3-209ENST00000540804 ICA1LQ8NDH6 482 aa12.4□□□□□ -0.42
MSRB3-209ENST00000540804 RASSF5Q8WWW0 418 aa12.4□□□□□ -0.42
MSRB3-209ENST00000540804 NSMAFQ92636 917 aa12.4□□□□□ -0.42
MSRB3-209ENST00000540804 C1orf159Q96HA4 380 aa12.4□□□□□ -0.42
MSRB3-209ENST00000540804 DENND2DQ9H6A0 471 aaPredicted RBP12.4□□□□□ -0.42
MSRB3-209ENST00000540804 LPAR2Q9HBW0 351 aa12.4□□□□□ -0.42
MSRB3-209ENST00000540804 TAAR3PQ9P1P4 343 aa12.4□□□□□ -0.42
MSRB3-209ENST00000540804 ARMCX1Q9P291 453 aa12.4□□□□□ -0.42
MSRB3-209ENST00000540804 RHCGQ9UBD6 479 aa12.4□□□□□ -0.42
MSRB3-209ENST00000540804 FBXO9Q9UK97 447 aaPredicted RBP12.4□□□□□ -0.42
MSRB3-209ENST00000540804 BAG5Q9UL15 447 aa12.4□□□□□ -0.42
MSRB3-209ENST00000540804 UGT2A1Q9Y4X1 527 aa12.4□□□□□ -0.42
MSRB3-209ENST00000540804 SNX13Q9Y5W8 968 aa12.4□□□□□ -0.42
MSRB3-209ENST00000540804 FAM157AC9JC47 383 aa12.39□□□□□ -0.43
MSRB3-209ENST00000540804 FARS2O95363 451 aaKnown RBP12.39□□□□□ -0.43
MSRB3-209ENST00000540804 LCKP06239 509 aa12.39□□□□□ -0.43
MSRB3-209ENST00000540804 VIMP08670 466 aaKnown RBP12.39□□□□□ -0.43
MSRB3-209ENST00000540804 MMP7P09237 267 aaPredicted RBP12.39□□□□□ -0.43
MSRB3-209ENST00000540804 TROVE2P10155 538 aaKnown RBP eCLIP12.39□□□□□ -0.43
MSRB3-209ENST00000540804 KDELR2P33947 212 aa12.39□□□□□ -0.43
MSRB3-209ENST00000540804 RBM34P42696 430 aaKnown RBP12.39□□□□□ -0.43
MSRB3-209ENST00000540804 CDH15P55291 814 aa12.39□□□□□ -0.43
MSRB3-209ENST00000540804 GLO1Q04760 184 aa12.39□□□□□ -0.43
MSRB3-209ENST00000540804 HNRNPA0Q13151 305 aaKnown RBP12.39□□□□□ -0.43
MSRB3-209ENST00000540804 TOP3AQ13472 1001 aaPredicted RBP12.39□□□□□ -0.43
MSRB3-209ENST00000540804 RGS7BPQ6MZT1 257 aaPredicted RBP12.39□□□□□ -0.43
MSRB3-209ENST00000540804 TMEM53Q6P2H8 277 aa12.39□□□□□ -0.43
MSRB3-209ENST00000540804 LINC01356Q8N9X3 169 aa12.39□□□□□ -0.43
MSRB3-209ENST00000540804 RBM15BQ8NDT2 890 aaKnown RBP12.39□□□□□ -0.43
MSRB3-209ENST00000540804 CPEB3Q8NE35 698 aaKnown RBP12.39□□□□□ -0.43
MSRB3-209ENST00000540804 CLDND2Q8NHS1 167 aa12.39□□□□□ -0.43
MSRB3-209ENST00000540804 NABP1Q96AH0 204 aa12.39□□□□□ -0.43
MSRB3-209ENST00000540804 RCN3Q96D15 328 aa12.39□□□□□ -0.43
MSRB3-209ENST00000540804 SEPHS2Q99611 448 aa12.39□□□□□ -0.43
MSRB3-209ENST00000540804 SH3GL1Q99961 368 aa12.39□□□□□ -0.43
MSRB3-209ENST00000540804 MS4A5Q9H3V2 200 aa12.39□□□□□ -0.43
MSRB3-209ENST00000540804 CDH20Q9HBT6 801 aa12.39□□□□□ -0.43
MSRB3-209ENST00000540804 ZNF275Q9NSD4 429 aaPredicted RBP12.39□□□□□ -0.43
MSRB3-209ENST00000540804 ZNF446Q9NWS9 450 aa12.39□□□□□ -0.43
MSRB3-209ENST00000540804 CMTM6Q9NX76 183 aa12.39□□□□□ -0.43
MSRB3-209ENST00000540804 A4GNTQ9UNA3 340 aa12.39□□□□□ -0.43
MSRB3-209ENST00000540804 BBIP1A8MTZ0 92 aa12.38□□□□□ -0.43
MSRB3-209ENST00000540804 FAM220BPB1ANY3 271 aa12.38□□□□□ -0.43
MSRB3-209ENST00000540804 CDC14BO60729 498 aa12.38□□□□□ -0.43
MSRB3-209ENST00000540804 TSPAN19P0C672 248 aa12.38□□□□□ -0.43
MSRB3-209ENST00000540804 MAKP20794 623 aa12.38□□□□□ -0.43
MSRB3-209ENST00000540804 CCNOP22674 350 aa12.38□□□□□ -0.43
MSRB3-209ENST00000540804 LSP1P33241 339 aa12.38□□□□□ -0.43
MSRB3-209ENST00000540804 GPR6P46095 362 aaPredicted RBP12.38□□□□□ -0.43
MSRB3-209ENST00000540804 ZNF84P51523 738 aa12.38□□□□□ -0.43
MSRB3-209ENST00000540804 RPS23P62266 143 aaKnown RBP12.38□□□□□ -0.43
MSRB3-209ENST00000540804 GUCY1A3Q02108 690 aa12.38□□□□□ -0.43
MSRB3-209ENST00000540804 SGCAQ16586 387 aa12.38□□□□□ -0.43
MSRB3-209ENST00000540804 NKPD1Q17RQ9 610 aa12.38□□□□□ -0.43
MSRB3-209ENST00000540804 SLC36A2Q495M3 483 aa12.38□□□□□ -0.43
MSRB3-209ENST00000540804 COQ5Q5HYK3 327 aa12.38□□□□□ -0.43
MSRB3-209ENST00000540804 PABPC1L2AQ5JQF8 200 aa12.38□□□□□ -0.43
MSRB3-209ENST00000540804 TMEM255AQ5JRV8 349 aa12.38□□□□□ -0.43
MSRB3-209ENST00000540804 ERICH5Q6P6B1 374 aa12.38□□□□□ -0.43
MSRB3-209ENST00000540804 RINLQ6ZS11 566 aa12.38□□□□□ -0.43
MSRB3-209ENST00000540804 VTCN1Q7Z7D3 282 aa12.38□□□□□ -0.43
MSRB3-209ENST00000540804 OR2T12Q8NG77 320 aa12.38□□□□□ -0.43
MSRB3-209ENST00000540804 AKR7LQ8NHP1 331 aa12.38□□□□□ -0.43
MSRB3-209ENST00000540804 RDH5Q92781 318 aa12.38□□□□□ -0.43
MSRB3-209ENST00000540804 NMD3Q96D46 503 aaKnown RBP12.38□□□□□ -0.43
MSRB3-209ENST00000540804 C19orf24Q9BVV8 132 aa12.38□□□□□ -0.43
MSRB3-209ENST00000540804 TREM2Q9NZC2 230 aa12.38□□□□□ -0.43
MSRB3-209ENST00000540804 TMEFF2Q9UIK5 374 aaPredicted RBP12.38□□□□□ -0.43
MSRB3-209ENST00000540804 FBXL3Q9UKT7 428 aa12.38□□□□□ -0.43
MSRB3-209ENST00000540804 MED31Q9Y3C7 131 aa12.38□□□□□ -0.43
MSRB3-209ENST00000540804 RTTNQ86VV8 2226 aa12.37□□□□□ -0.43
MSRB3-209ENST00000540804 MGRN1O60291 552 aa12.37□□□□□ -0.43
MSRB3-209ENST00000540804 RP2O75695 350 aa12.37□□□□□ -0.43
MSRB3-209ENST00000540804 IFI30P13284 250 aa12.37□□□□□ -0.43
MSRB3-209ENST00000540804 ZNF32P17041 273 aa12.37□□□□□ -0.43
MSRB3-209ENST00000540804 HNF1AP20823 631 aa12.37□□□□□ -0.43
MSRB3-209ENST00000540804 RBMXP38159 391 aaKnown RBP12.37□□□□□ -0.43
MSRB3-209ENST00000540804 DAP3P51398 398 aaKnown RBP12.37□□□□□ -0.43
MSRB3-209ENST00000540804 ZNF133P52736 654 aaPredicted RBP12.37□□□□□ -0.43
MSRB3-209ENST00000540804 UCP2P55851 309 aa12.37□□□□□ -0.43
MSRB3-209ENST00000540804 CCL8P80075 99 aa12.37□□□□□ -0.43
MSRB3-209ENST00000540804 CD47Q08722 323 aa12.37□□□□□ -0.43
MSRB3-209ENST00000540804 TBC1D28Q2M2D7 210 aa12.37□□□□□ -0.43
MSRB3-209ENST00000540804 SPATA46Q5T0L3 261 aa12.37□□□□□ -0.43
MSRB3-209ENST00000540804 C10orf128Q5T292 105 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms