RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 SIGLEC14Q08ET2 396 aa12.34□□□□□ -0.43
BNIP3-202ENST00000540159 ZMYND11Q15326 602 aa12.34□□□□□ -0.43
BNIP3-202ENST00000540159 ESCO2Q56NI9 601 aa12.34□□□□□ -0.43
BNIP3-202ENST00000540159 ZNF684Q5T5D7 378 aa12.34□□□□□ -0.43
BNIP3-202ENST00000540159 COQ8AQ8NI60 647 aa12.34□□□□□ -0.43
BNIP3-202ENST00000540159 EMC6Q9BV81 110 aa12.34□□□□□ -0.43
BNIP3-202ENST00000540159 CENPMQ9NSP4 180 aa12.34□□□□□ -0.43
BNIP3-202ENST00000540159 GLTPQ9NZD2 209 aa12.34□□□□□ -0.43
BNIP3-202ENST00000540159 PLCL2Q9UPR0 1127 aa12.34□□□□□ -0.43
BNIP3-202ENST00000540159 LRP4O75096 1905 aa12.34□□□□□ -0.43
BNIP3-202ENST00000540159 RHPN2P1A8MT19 583 aa12.34□□□□□ -0.43
BNIP3-202ENST00000540159 ABHD16AO95870 558 aa12.34□□□□□ -0.43
BNIP3-202ENST00000540159 CD3DP04234 171 aa12.34□□□□□ -0.43
BNIP3-202ENST00000540159 VSIG10L2P0DP72 767 aa12.34□□□□□ -0.43
BNIP3-202ENST00000540159 BLKP51451 505 aa12.34□□□□□ -0.43
BNIP3-202ENST00000540159 LRRC37A5PQ49AS3 106 aa12.34□□□□□ -0.43
BNIP3-202ENST00000540159 C9orf40Q8IXQ3 194 aa12.34□□□□□ -0.43
BNIP3-202ENST00000540159 JAGN1Q8N5M9 183 aa12.34□□□□□ -0.43
BNIP3-202ENST00000540159 LRRC75AQ8NAA5 344 aa12.34□□□□□ -0.43
BNIP3-202ENST00000540159 TSTD1Q8NFU3 115 aa12.34□□□□□ -0.43
BNIP3-202ENST00000540159 HOXB13Q92826 284 aaPredicted RBP12.34□□□□□ -0.43
BNIP3-202ENST00000540159 HAVCR1Q96D42 359 aa12.34□□□□□ -0.43
BNIP3-202ENST00000540159 LCORQ96JN0 433 aaPredicted RBP12.34□□□□□ -0.43
BNIP3-202ENST00000540159 DPYSL5Q9BPU6 564 aa12.34□□□□□ -0.43
BNIP3-202ENST00000540159 TAS2R5Q9NYW4 299 aa12.34□□□□□ -0.43
BNIP3-202ENST00000540159 COPZ2Q9P299 210 aa12.34□□□□□ -0.43
BNIP3-202ENST00000540159 CTSFQ9UBX1 484 aa12.34□□□□□ -0.43
BNIP3-202ENST00000540159 FAM221BA6H8Z2 402 aa12.33□□□□□ -0.44
BNIP3-202ENST00000540159 CXCL2P19875 107 aa12.33□□□□□ -0.44
BNIP3-202ENST00000540159 RORAP35398 523 aa12.33□□□□□ -0.44
BNIP3-202ENST00000540159 PSMD4P55036 377 aaKnown RBP12.33□□□□□ -0.44
BNIP3-202ENST00000540159 HSD17B7P56937 341 aa12.33□□□□□ -0.44
BNIP3-202ENST00000540159 NKPD1Q17RQ9 610 aa12.33□□□□□ -0.44
BNIP3-202ENST00000540159 SLC35D3Q5M8T2 416 aa12.33□□□□□ -0.44
BNIP3-202ENST00000540159 DCAF12L2Q5VW00 463 aa12.33□□□□□ -0.44
BNIP3-202ENST00000540159 KRT77Q7Z794 578 aa12.33□□□□□ -0.44
BNIP3-202ENST00000540159 LRRTM1Q86UE6 522 aa12.33□□□□□ -0.44
BNIP3-202ENST00000540159 CDC20BQ86Y33 519 aa12.33□□□□□ -0.44
BNIP3-202ENST00000540159 WDFY1Q8IWB7 410 aa12.33□□□□□ -0.44
BNIP3-202ENST00000540159 KLHL15Q96M94 604 aa12.33□□□□□ -0.44
BNIP3-202ENST00000540159 LANCL2Q9NS86 450 aa12.33□□□□□ -0.44
BNIP3-202ENST00000540159 MED29Q9NX70 200 aa12.33□□□□□ -0.44
BNIP3-202ENST00000540159 SCP2D1Q9UJQ7 156 aa12.33□□□□□ -0.44
BNIP3-202ENST00000540159 GOSR2O14653 212 aa12.33□□□□□ -0.44
BNIP3-202ENST00000540159 ZNF749O43361 778 aa12.33□□□□□ -0.44
BNIP3-202ENST00000540159 RBBP9O75884 186 aa12.33□□□□□ -0.44
BNIP3-202ENST00000540159 PNMTP11086 282 aa12.33□□□□□ -0.44
BNIP3-202ENST00000540159 SKP1P63208 163 aa12.33□□□□□ -0.44
BNIP3-202ENST00000540159 DYRK1AQ13627 763 aa12.33□□□□□ -0.44
BNIP3-202ENST00000540159 C4orf46Q504U0 113 aa12.33□□□□□ -0.44
BNIP3-202ENST00000540159 ZNF417Q8TAU3 575 aa12.33□□□□□ -0.44
BNIP3-202ENST00000540159 LRRC20Q8TCA0 184 aa12.33□□□□□ -0.44
BNIP3-202ENST00000540159 GPR148Q8TDV2 347 aa12.33□□□□□ -0.44
BNIP3-202ENST00000540159 TNFAIP8L1Q8WVP5 186 aa12.33□□□□□ -0.44
BNIP3-202ENST00000540159 MRPL48Q96GC5 212 aaKnown RBP12.33□□□□□ -0.44
BNIP3-202ENST00000540159 SFXN2Q96NB2 322 aa12.33□□□□□ -0.44
BNIP3-202ENST00000540159 ZNF587Q96SQ5 575 aaPredicted RBP12.33□□□□□ -0.44
BNIP3-202ENST00000540159 MOKQ9UQ07 419 aa12.33□□□□□ -0.44
BNIP3-202ENST00000540159 COA3Q9Y2R0 106 aaPredicted RBP12.33□□□□□ -0.44
BNIP3-202ENST00000540159 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.32□□□□□ -0.44
BNIP3-202ENST00000540159 FITM1A5D6W6 292 aa12.32□□□□□ -0.44
BNIP3-202ENST00000540159 ZNF35P13682 527 aa12.32□□□□□ -0.44
BNIP3-202ENST00000540159 FOLR1P15328 257 aa12.32□□□□□ -0.44
BNIP3-202ENST00000540159 ARPC4P59998 168 aa12.32□□□□□ -0.44
BNIP3-202ENST00000540159 UBXN2BQ14CS0 331 aa12.32□□□□□ -0.44
BNIP3-202ENST00000540159 C2orf76Q3KRA6 126 aa12.32□□□□□ -0.44
BNIP3-202ENST00000540159 SCGB2B2Q4G0G5 96 aa12.32□□□□□ -0.44
BNIP3-202ENST00000540159 CDH24Q86UP0 819 aa12.32□□□□□ -0.44
BNIP3-202ENST00000540159 ZNF227Q86WZ6 799 aa12.32□□□□□ -0.44
BNIP3-202ENST00000540159 MIB2Q96AX9 1013 aa12.32□□□□□ -0.44
BNIP3-202ENST00000540159 ARL5BQ96KC2 179 aa12.32□□□□□ -0.44
BNIP3-202ENST00000540159 SPACA5Q96QH8 159 aa12.32□□□□□ -0.44
BNIP3-202ENST00000540159 CMKLR1Q99788 373 aa12.32□□□□□ -0.44
BNIP3-202ENST00000540159 PTDSS2Q9BVG9 487 aa12.32□□□□□ -0.44
BNIP3-202ENST00000540159 ZCCHC4Q9H5U6 513 aa12.32□□□□□ -0.44
BNIP3-202ENST00000540159 RDH8Q9NYR8 311 aa12.32□□□□□ -0.44
BNIP3-202ENST00000540159 TAS2R4Q9NYW5 299 aa12.32□□□□□ -0.44
BNIP3-202ENST00000540159 EMC9Q9Y3B6 208 aa12.32□□□□□ -0.44
BNIP3-202ENST00000540159 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.32□□□□□ -0.44
BNIP3-202ENST00000540159 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.32□□□□□ -0.44
BNIP3-202ENST00000540159 ANKRD20A5PA0PJZ0 165 aa12.32□□□□□ -0.44
BNIP3-202ENST00000540159 L7N2F9 121 aa12.32□□□□□ -0.44
BNIP3-202ENST00000540159 SUSD5O60279 629 aa12.32□□□□□ -0.44
BNIP3-202ENST00000540159 CREBL2O60519 120 aaPredicted RBP12.32□□□□□ -0.44
BNIP3-202ENST00000540159 INSM1Q01101 510 aaPredicted RBP12.32□□□□□ -0.44
BNIP3-202ENST00000540159 ATXN7L3Q14CW9 347 aaPredicted RBP12.32□□□□□ -0.44
BNIP3-202ENST00000540159 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.32□□□□□ -0.44
BNIP3-202ENST00000540159 LIN54Q6MZP7 749 aa12.32□□□□□ -0.44
BNIP3-202ENST00000540159 RTN4RL2Q86UN3 420 aa12.32□□□□□ -0.44
BNIP3-202ENST00000540159 EXD3Q8N9H8 876 aa12.32□□□□□ -0.44
BNIP3-202ENST00000540159 STK35Q8TDR2 534 aa12.32□□□□□ -0.44
BNIP3-202ENST00000540159 SORCS2Q96PQ0 1159 aa12.32□□□□□ -0.44
BNIP3-202ENST00000540159 B3GNT4Q9C0J1 378 aa12.32□□□□□ -0.44
BNIP3-202ENST00000540159 FBXO4Q9UKT5 387 aa12.32□□□□□ -0.44
BNIP3-202ENST00000540159 ACOT7O00154 380 aa12.31□□□□□ -0.44
BNIP3-202ENST00000540159 NUPL2O15504 423 aaKnown RBP12.31□□□□□ -0.44
BNIP3-202ENST00000540159 IL33O95760 270 aa12.31□□□□□ -0.44
BNIP3-202ENST00000540159 H2BFSP57053 126 aa12.31□□□□□ -0.44
BNIP3-202ENST00000540159 EIF2B1Q14232 305 aaKnown RBP12.31□□□□□ -0.44
BNIP3-202ENST00000540159 OPCMLQ14982 345 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms