RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 MFSD8Q8NHS3 518 aa12.6□□□□□ -0.39
LIMK1-208ENST00000538333 MAFAQ8NHW3 353 aaPredicted RBP12.6□□□□□ -0.39
LIMK1-208ENST00000538333 GPR148Q8TDV2 347 aa12.6□□□□□ -0.39
LIMK1-208ENST00000538333 MCHR2Q969V1 340 aa12.6□□□□□ -0.39
LIMK1-208ENST00000538333 NXPE2Q96DL1 559 aa12.6□□□□□ -0.39
LIMK1-208ENST00000538333 GFM1Q96RP9 751 aaKnown RBP12.6□□□□□ -0.39
LIMK1-208ENST00000538333 AUNIPQ9H7T9 357 aa12.6□□□□□ -0.39
LIMK1-208ENST00000538333 CSRP1P21291 193 aaKnown RBP12.59□□□□□ -0.39
LIMK1-208ENST00000538333 PTGDSP41222 190 aa12.59□□□□□ -0.39
LIMK1-208ENST00000538333 CCR9P51686 369 aa12.59□□□□□ -0.39
LIMK1-208ENST00000538333 SLC18B1Q6NT16 456 aa12.59□□□□□ -0.39
LIMK1-208ENST00000538333 WDFY1Q8IWB7 410 aa12.59□□□□□ -0.39
LIMK1-208ENST00000538333 EID2Q8N6I1 236 aa12.59□□□□□ -0.39
LIMK1-208ENST00000538333 OR5L2Q8NGL0 311 aa12.59□□□□□ -0.39
LIMK1-208ENST00000538333 RNF128Q8TEB7 428 aa12.59□□□□□ -0.39
LIMK1-208ENST00000538333 NAT6Q93015 286 aa12.59□□□□□ -0.39
LIMK1-208ENST00000538333 TMEM106AQ96A25 262 aa12.59□□□□□ -0.39
LIMK1-208ENST00000538333 SLITRK2Q9H156 845 aa12.59□□□□□ -0.39
LIMK1-208ENST00000538333 DPAGT1Q9H3H5 408 aa12.59□□□□□ -0.39
LIMK1-208ENST00000538333 AKIRIN1Q9H9L7 192 aaPredicted RBP12.59□□□□□ -0.39
LIMK1-208ENST00000538333 MCUBQ9NWR8 336 aa12.59□□□□□ -0.39
LIMK1-208ENST00000538333 OCIAD1Q9NX40 245 aa12.59□□□□□ -0.39
LIMK1-208ENST00000538333 VDAC3Q9Y277 283 aa12.59□□□□□ -0.39
LIMK1-208ENST00000538333 C7orf66A4D0T2 115 aa12.59□□□□□ -0.39
LIMK1-208ENST00000538333 FAM172BPA6NC97 362 aa12.59□□□□□ -0.39
LIMK1-208ENST00000538333 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.59□□□□□ -0.39
LIMK1-208ENST00000538333 GPR171O14626 319 aa12.59□□□□□ -0.39
LIMK1-208ENST00000538333 ZNF208O43345 1280 aa12.59□□□□□ -0.39
LIMK1-208ENST00000538333 WNT11O96014 354 aa12.59□□□□□ -0.39
LIMK1-208ENST00000538333 PNPP00491 289 aa12.59□□□□□ -0.39
LIMK1-208ENST00000538333 YES1P07947 543 aa12.59□□□□□ -0.39
LIMK1-208ENST00000538333 MRPS15P82914 257 aaKnown RBP12.59□□□□□ -0.39
LIMK1-208ENST00000538333 FOXF1Q12946 379 aa12.59□□□□□ -0.39
LIMK1-208ENST00000538333 MFSD13AQ14CX5 517 aa12.59□□□□□ -0.39
LIMK1-208ENST00000538333 MRPL14Q6P1L8 145 aaKnown RBP12.59□□□□□ -0.39
LIMK1-208ENST00000538333 LIX1LQ8IVB5 337 aa12.59□□□□□ -0.39
LIMK1-208ENST00000538333 DND1Q8IYX4 353 aaKnown RBP12.59□□□□□ -0.39
LIMK1-208ENST00000538333 ASB10Q8WXI3 467 aa12.59□□□□□ -0.39
LIMK1-208ENST00000538333 PIGKQ92643 395 aa12.59□□□□□ -0.39
LIMK1-208ENST00000538333 PMEPA1Q969W9 287 aa12.59□□□□□ -0.39
LIMK1-208ENST00000538333 SCMH1Q96GD3 660 aa12.59□□□□□ -0.39
LIMK1-208ENST00000538333 C7orf50Q9BRJ6 194 aaKnown RBP12.59□□□□□ -0.39
LIMK1-208ENST00000538333 CRB3Q9BUF7 120 aa12.59□□□□□ -0.39
LIMK1-208ENST00000538333 ULBP3Q9BZM4 244 aa12.59□□□□□ -0.39
LIMK1-208ENST00000538333 GAREM1Q9H706 876 aa12.59□□□□□ -0.39
LIMK1-208ENST00000538333 PLEKHA1Q9HB21 404 aa12.59□□□□□ -0.39
LIMK1-208ENST00000538333 NUDT15Q9NV35 164 aa12.59□□□□□ -0.39
LIMK1-208ENST00000538333 MYOTQ9UBF9 498 aa12.59□□□□□ -0.39
LIMK1-208ENST00000538333 B3GALT1Q9Y5Z6 326 aa12.59□□□□□ -0.39
LIMK1-208ENST00000538333 KIF26BQ2KJY2 2108 aa12.58□□□□□ -0.4
LIMK1-208ENST00000538333 A0A0A6YYJ9 748 aa12.58□□□□□ -0.4
LIMK1-208ENST00000538333 TRABD2BA6NFA1 517 aa12.58□□□□□ -0.4
LIMK1-208ENST00000538333 NPIPB13A6NJU9 1138 aa12.58□□□□□ -0.4
LIMK1-208ENST00000538333 NPIPB4C9JG80 1138 aa12.58□□□□□ -0.4
LIMK1-208ENST00000538333 DKK1O94907 266 aa12.58□□□□□ -0.4
LIMK1-208ENST00000538333 TCRBP04435 133 aa12.58□□□□□ -0.4
LIMK1-208ENST00000538333 SPARCP09486 303 aa12.58□□□□□ -0.4
LIMK1-208ENST00000538333 CRABP1P29762 137 aa12.58□□□□□ -0.4
LIMK1-208ENST00000538333 PTGS2P35354 604 aa12.58□□□□□ -0.4
LIMK1-208ENST00000538333 HOXD12P35452 270 aa12.58□□□□□ -0.4
LIMK1-208ENST00000538333 GDNFP39905 211 aa12.58□□□□□ -0.4
LIMK1-208ENST00000538333 PTH2RP49190 550 aa12.58□□□□□ -0.4
LIMK1-208ENST00000538333 ADAM8P78325 824 aa12.58□□□□□ -0.4
LIMK1-208ENST00000538333 DYRK1AQ13627 763 aa12.58□□□□□ -0.4
LIMK1-208ENST00000538333 CDK10Q15131 360 aa12.58□□□□□ -0.4
LIMK1-208ENST00000538333 OR7A5Q15622 319 aa12.58□□□□□ -0.4
LIMK1-208ENST00000538333 ODF4Q2M2E3 257 aa12.58□□□□□ -0.4
LIMK1-208ENST00000538333 MTFR2Q6P444 385 aa12.58□□□□□ -0.4
LIMK1-208ENST00000538333 H1FNTQ75WM6 255 aaPredicted RBP12.58□□□□□ -0.4
LIMK1-208ENST00000538333 DNAAF1Q8NEP3 725 aa12.58□□□□□ -0.4
LIMK1-208ENST00000538333 SYNPRQ8TBG9 265 aa12.58□□□□□ -0.4
LIMK1-208ENST00000538333 AKAP1Q92667 903 aaKnown RBP eCLIP12.58□□□□□ -0.4
LIMK1-208ENST00000538333 PRMT8Q9NR22 394 aaPredicted RBP12.58□□□□□ -0.4
LIMK1-208ENST00000538333 PAQR5Q9NXK6 330 aaPredicted RBP12.58□□□□□ -0.4
LIMK1-208ENST00000538333 FOXJ3Q9UPW0 622 aa12.58□□□□□ -0.4
LIMK1-208ENST00000538333 COA3Q9Y2R0 106 aaPredicted RBP12.58□□□□□ -0.4
LIMK1-208ENST00000538333 BOLA1Q9Y3E2 137 aa12.58□□□□□ -0.4
LIMK1-208ENST00000538333 NUBP2Q9Y5Y2 271 aa12.58□□□□□ -0.4
LIMK1-208ENST00000538333 ETV7Q9Y603 341 aa12.58□□□□□ -0.4
LIMK1-208ENST00000538333 IGLV3-32A0A0A0MS00 114 aa12.57□□□□□ -0.4
LIMK1-208ENST00000538333 MEN1O00255 615 aa12.57□□□□□ -0.4
LIMK1-208ENST00000538333 EFNA2O43921 213 aa12.57□□□□□ -0.4
LIMK1-208ENST00000538333 ZFAND5O76080 213 aa12.57□□□□□ -0.4
LIMK1-208ENST00000538333 PDGFBP01127 241 aaPredicted RBP12.57□□□□□ -0.4
LIMK1-208ENST00000538333 RAB40ALP0C0E4 278 aa12.57□□□□□ -0.4
LIMK1-208ENST00000538333 GIFP27352 417 aa12.57□□□□□ -0.4
LIMK1-208ENST00000538333 CFPP27918 469 aa12.57□□□□□ -0.4
LIMK1-208ENST00000538333 RPS15P62841 145 aaKnown RBP12.57□□□□□ -0.4
LIMK1-208ENST00000538333 GLO1Q04760 184 aa12.57□□□□□ -0.4
LIMK1-208ENST00000538333 SLC25A53Q5H9E4 307 aa12.57□□□□□ -0.4
LIMK1-208ENST00000538333 BCL2L15Q5TBC7 163 aa12.57□□□□□ -0.4
LIMK1-208ENST00000538333 TMEM53Q6P2H8 277 aa12.57□□□□□ -0.4
LIMK1-208ENST00000538333 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.57□□□□□ -0.4
LIMK1-208ENST00000538333 ZNF248Q8NDW4 579 aa12.57□□□□□ -0.4
LIMK1-208ENST00000538333 RAB40AQ8WXH6 277 aa12.57□□□□□ -0.4
LIMK1-208ENST00000538333 EDAQ92838 391 aa12.57□□□□□ -0.4
LIMK1-208ENST00000538333 MIB2Q96AX9 1013 aa12.57□□□□□ -0.4
LIMK1-208ENST00000538333 HAVCR1Q96D42 359 aa12.57□□□□□ -0.4
LIMK1-208ENST00000538333 KCNK17Q96T54 332 aa12.57□□□□□ -0.4
LIMK1-208ENST00000538333 ABHD6Q9BV23 337 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms