RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 NPIPB7O75200 414 aa9.7□□□□□ -0.86
CLIP1-210ENST00000538120 F13BP05160 661 aa9.7□□□□□ -0.86
CLIP1-210ENST00000538120 GP1BBP13224 206 aa9.7□□□□□ -0.86
CLIP1-210ENST00000538120 ZNF19P17023 458 aa9.7□□□□□ -0.86
CLIP1-210ENST00000538120 GALP22466 123 aa9.7□□□□□ -0.86
CLIP1-210ENST00000538120 CXCR1P25024 350 aa9.7□□□□□ -0.86
CLIP1-210ENST00000538120 PITPNBP48739 271 aa9.7□□□□□ -0.86
CLIP1-210ENST00000538120 ACTC1P68032 377 aa9.7□□□□□ -0.86
CLIP1-210ENST00000538120 ACTA1P68133 377 aa9.7□□□□□ -0.86
CLIP1-210ENST00000538120 PON3Q15166 354 aa9.7□□□□□ -0.86
CLIP1-210ENST00000538120 LPAL2Q16609 132 aa9.7□□□□□ -0.86
CLIP1-210ENST00000538120 BICRALQ6AI39 1079 aa9.7□□□□□ -0.86
CLIP1-210ENST00000538120 LEG1Q6P5S2 330 aa9.7□□□□□ -0.86
CLIP1-210ENST00000538120 ARL9Q6T311 187 aa9.7□□□□□ -0.86
CLIP1-210ENST00000538120 SYT9Q86SS6 491 aa9.7□□□□□ -0.86
CLIP1-210ENST00000538120 LRRC28Q86X40 367 aaPredicted RBP9.7□□□□□ -0.86
CLIP1-210ENST00000538120 DTWD2Q8NBA8 298 aa9.7□□□□□ -0.86
CLIP1-210ENST00000538120 OR5J2Q8NH18 312 aa9.7□□□□□ -0.86
CLIP1-210ENST00000538120 RNF138Q8WVD3 245 aa9.7□□□□□ -0.86
CLIP1-210ENST00000538120 ATOH1Q92858 354 aaPredicted RBP9.7□□□□□ -0.86
CLIP1-210ENST00000538120 PMEPA1Q969W9 287 aa9.7□□□□□ -0.86
CLIP1-210ENST00000538120 DNAJA3Q96EY1 480 aa9.7□□□□□ -0.86
CLIP1-210ENST00000538120 CNN2Q99439 309 aaKnown RBP9.7□□□□□ -0.86
CLIP1-210ENST00000538120 FBXO4Q9UKT5 387 aa9.7□□□□□ -0.86
CLIP1-210ENST00000538120 ING4Q9UNL4 249 aa9.7□□□□□ -0.86
CLIP1-210ENST00000538120 COPS3Q9UNS2 423 aa9.7□□□□□ -0.86
CLIP1-210ENST00000538120 HRH3Q9Y5N1 445 aa9.7□□□□□ -0.86
CLIP1-210ENST00000538120 TRAV36DV7A0A075B6V5 113 aa9.69□□□□□ -0.86
CLIP1-210ENST00000538120 A0A1W2PPK0 400 aa9.69□□□□□ -0.86
CLIP1-210ENST00000538120 C7orf66A4D0T2 115 aa9.69□□□□□ -0.86
CLIP1-210ENST00000538120 I3L521 148 aa9.69□□□□□ -0.86
CLIP1-210ENST00000538120 PLPP2O43688 288 aa9.69□□□□□ -0.86
CLIP1-210ENST00000538120 SELENOFO60613 162 aa9.69□□□□□ -0.86
CLIP1-210ENST00000538120 PDGFAP04085 211 aa9.69□□□□□ -0.86
CLIP1-210ENST00000538120 OR2T7P0C7T2 308 aa9.69□□□□□ -0.86
CLIP1-210ENST00000538120 CCL4P13236 92 aa9.69□□□□□ -0.86
CLIP1-210ENST00000538120 CFL1P23528 166 aaKnown RBP9.69□□□□□ -0.86
CLIP1-210ENST00000538120 STOMP27105 288 aa9.69□□□□□ -0.86
CLIP1-210ENST00000538120 GIFP27352 417 aa9.69□□□□□ -0.86
CLIP1-210ENST00000538120 NAA10P41227 235 aaPredicted RBP9.69□□□□□ -0.86
CLIP1-210ENST00000538120 MTNR1BP49286 362 aa9.69□□□□□ -0.86
CLIP1-210ENST00000538120 NRG3P56975 720 aa9.69□□□□□ -0.86
CLIP1-210ENST00000538120 SLC26A5P58743 744 aa9.69□□□□□ -0.86
CLIP1-210ENST00000538120 SLC3A1Q07837 685 aa9.69□□□□□ -0.86
CLIP1-210ENST00000538120 IL11RAQ14626 422 aa9.69□□□□□ -0.86
CLIP1-210ENST00000538120 ODF1Q14990 250 aa9.69□□□□□ -0.86
CLIP1-210ENST00000538120 SLC35D3Q5M8T2 416 aa9.69□□□□□ -0.86
CLIP1-210ENST00000538120 SFXN4Q6P4A7 337 aa9.69□□□□□ -0.86
CLIP1-210ENST00000538120 ZNF782Q6ZMW2 699 aaPredicted RBP9.69□□□□□ -0.86
CLIP1-210ENST00000538120 SLC35F2Q8IXU6 374 aa9.69□□□□□ -0.86
CLIP1-210ENST00000538120 POMGNT2Q8NAT1 580 aa9.69□□□□□ -0.86
CLIP1-210ENST00000538120 OR13C5Q8NGS8 318 aa9.69□□□□□ -0.86
CLIP1-210ENST00000538120 OR2T27Q8NH04 317 aa9.69□□□□□ -0.86
CLIP1-210ENST00000538120 PGLYRP3Q96LB9 341 aa9.69□□□□□ -0.86
CLIP1-210ENST00000538120 TSPAN32Q96QS1 320 aa9.69□□□□□ -0.86
CLIP1-210ENST00000538120 NPAS1Q99742 590 aa9.69□□□□□ -0.86
CLIP1-210ENST00000538120 DPCDQ9BVM2 203 aaPredicted RBP9.69□□□□□ -0.86
CLIP1-210ENST00000538120 TTTY10Q9BZA0 68 aa9.69□□□□□ -0.86
CLIP1-210ENST00000538120 FKRPQ9H9S5 495 aa9.69□□□□□ -0.86
CLIP1-210ENST00000538120 TRIM36Q9NQ86 728 aa9.69□□□□□ -0.86
CLIP1-210ENST00000538120 TAS2R5Q9NYW4 299 aa9.69□□□□□ -0.86
CLIP1-210ENST00000538120 ST6GALNAC2Q9UJ37 374 aa9.69□□□□□ -0.86
CLIP1-210ENST00000538120 ZNF346Q9UL40 294 aaKnown RBP9.69□□□□□ -0.86
CLIP1-210ENST00000538120 MRPS7Q9Y2R9 242 aaKnown RBP9.69□□□□□ -0.86
CLIP1-210ENST00000538120 VPS13AQ96RL7 3174 aa9.69□□□□□ -0.86
CLIP1-210ENST00000538120 TMED7-TICAM2A0A0A6YYA0 188 aa9.68□□□□□ -0.86
CLIP1-210ENST00000538120 A0A0G2JK05 382 aa9.68□□□□□ -0.86
CLIP1-210ENST00000538120 LINC00862A6NCI5 91 aa9.68□□□□□ -0.86
CLIP1-210ENST00000538120 FAM171A2A8MVW0 826 aa9.68□□□□□ -0.86
CLIP1-210ENST00000538120 MPC2O95563 127 aa9.68□□□□□ -0.86
CLIP1-210ENST00000538120 NUDT14O95848 222 aa9.68□□□□□ -0.86
CLIP1-210ENST00000538120 DHFRP00374 187 aa9.68□□□□□ -0.86
CLIP1-210ENST00000538120 RAF1P04049 648 aa9.68□□□□□ -0.86
CLIP1-210ENST00000538120 TCRBP04435 133 aa9.68□□□□□ -0.86
CLIP1-210ENST00000538120 PRKACBP22694 351 aa9.68□□□□□ -0.86
CLIP1-210ENST00000538120 SDHAP31040 664 aa9.68□□□□□ -0.86
CLIP1-210ENST00000538120 PYCR1P32322 319 aa9.68□□□□□ -0.86
CLIP1-210ENST00000538120 ACVR1BP36896 505 aa9.68□□□□□ -0.86
CLIP1-210ENST00000538120 TALDO1P37837 337 aa9.68□□□□□ -0.86
CLIP1-210ENST00000538120 DUSP3P51452 185 aaPredicted RBP9.68□□□□□ -0.86
CLIP1-210ENST00000538120 POLR2HP52434 150 aaKnown RBP9.68□□□□□ -0.86
CLIP1-210ENST00000538120 SLC25A1P53007 311 aa9.68□□□□□ -0.86
CLIP1-210ENST00000538120 IL10RAQ13651 578 aa9.68□□□□□ -0.86
CLIP1-210ENST00000538120 COL28A1Q2UY09 1125 aa9.68□□□□□ -0.86
CLIP1-210ENST00000538120 LGALSLQ3ZCW2 172 aaPredicted RBP9.68□□□□□ -0.86
CLIP1-210ENST00000538120 TP53I3Q53FA7 332 aa9.68□□□□□ -0.86
CLIP1-210ENST00000538120 DMKNQ6E0U4 476 aaPredicted RBP9.68□□□□□ -0.86
CLIP1-210ENST00000538120 OR5M10Q6IEU7 315 aa9.68□□□□□ -0.86
CLIP1-210ENST00000538120 FAM199XQ6PEV8 388 aaPredicted RBP9.68□□□□□ -0.86
CLIP1-210ENST00000538120 GPALPP1Q8IXQ4 340 aa9.68□□□□□ -0.86
CLIP1-210ENST00000538120 TRMT10AQ8TBZ6 339 aaKnown RBP9.68□□□□□ -0.86
CLIP1-210ENST00000538120 ACOT12Q8WYK0 555 aa9.68□□□□□ -0.86
CLIP1-210ENST00000538120 INTS12Q96CB8 462 aaKnown RBP9.68□□□□□ -0.86
CLIP1-210ENST00000538120 TSSK2Q96PF2 358 aa9.68□□□□□ -0.86
CLIP1-210ENST00000538120 OR51J1Q9H342 316 aa9.68□□□□□ -0.86
CLIP1-210ENST00000538120 PPP1R14DQ9NXH3 145 aa9.68□□□□□ -0.86
CLIP1-210ENST00000538120 TAS2R10Q9NYW0 307 aa9.68□□□□□ -0.86
CLIP1-210ENST00000538120 TMED7Q9Y3B3 224 aa9.68□□□□□ -0.86
CLIP1-210ENST00000538120 DCTN6O00399 190 aa9.68□□□□□ -0.86
CLIP1-210ENST00000538120 SUSD5O60279 629 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms