RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 OR12D2P58182 307 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 ERVFRD-1P60508 538 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 IL2P60568 153 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 ST8SIA6P61647 398 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 RAP1AP62834 184 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 HBA1P69905 142 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 BTN3A2P78410 334 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 ZNF177Q13360 481 aaPredicted RBP3.39□□□□□ -1.87
MCF2-210ENST00000536274 PRSS53Q2L4Q9 553 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 PCGF3Q3KNV8 242 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 ACSM3Q53FZ2 586 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 UBXN11Q5T124 520 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 OLFML2AQ68BL7 652 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 NOXRED1Q6NXP6 359 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 PODNL1Q6PEZ8 512 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 SBSNQ6UWP8 590 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 MPZL3Q6UWV2 235 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 FJX1Q86VR8 437 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 GKN2Q86XP6 184 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 C10orf53Q8N6V4 93 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 C12orf76Q8N812 135 aaPredicted RBP3.39□□□□□ -1.87
MCF2-210ENST00000536274 OR10H4Q8NGA5 316 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 OR13C2Q8NGS9 318 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 ABHD4Q8TB40 342 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 Q8WTZ3 238 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 OIT3Q8WWZ8 545 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 AUTS2Q8WXX7 1259 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 PSMG2Q969U7 264 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 CMTM7Q96FZ5 175 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 CDKN2AIPNLQ96HQ2 116 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 ZNF845Q96IR2 970 aaPredicted RBP3.39□□□□□ -1.87
MCF2-210ENST00000536274 MRGPRX4Q96LA9 322 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 ZNF558Q96NG5 402 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 INTS14Q96SY0 518 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 TIMP4Q99727 224 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 MED10Q9BTT4 135 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 SMIM3Q9BZL3 60 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 OR51I1Q9H343 314 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 EXO5Q9H790 373 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 ZNF302Q9NR11 478 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 CD207Q9UJ71 328 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 FBXO7Q9Y3I1 522 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 TMEM184BQ9Y519 407 aaPredicted RBP3.39□□□□□ -1.87
MCF2-210ENST00000536274 DOCK8Q8NF50 2099 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 ANK1P16157 1881 aa3.39□□□□□ -1.87
MCF2-210ENST00000536274 NYNRINQ9P2P1 1898 aaKnown RBP3.39□□□□□ -1.87
MCF2-210ENST00000536274 SCN2AQ99250 2005 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 PLXNA4Q9HCM2 1894 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 TCRBV21S2A2A0A5A6 115 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 SLC5A10A0PJK1 596 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 SMCO3A2RU48 225 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 CDRT15L2A8MXV6 281 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 C17orf105B2RV13 164 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 ZBTB42B2RXF5 422 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 C9J4A7 227 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 TMEM238C9JI98 176 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 ZNF587BE7ETH6 402 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 IMPA2O14732 288 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 FGF16O43320 207 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 NDUFB6O95139 128 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 ETHE1O95571 254 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 AK1P00568 194 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 CD74P04233 296 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 CA3P07451 260 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 SPARCP09486 303 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 LINC00271P0C7V0 271 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 EPORP19235 508 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 KLK2P20151 261 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 CDK2P24941 298 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 HOXC12P31275 282 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 PSMB10P40306 273 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 SNRPNP63162 240 aaKnown RBP3.38□□□□□ -1.87
MCF2-210ENST00000536274 ARHGAP1Q07960 439 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 HERPUD1Q15011 391 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 PCBP2Q15366 365 aaKnown RBP eCLIP3.38□□□□□ -1.87
MCF2-210ENST00000536274 RNASE10Q5GAN6 216 aaKnown RBP3.38□□□□□ -1.87
MCF2-210ENST00000536274 C11orf87Q6NUJ2 197 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 TCTN3Q6NUS6 607 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 CDC73Q6P1J9 531 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 ZNF322Q6U7Q0 402 aaPredicted RBP3.38□□□□□ -1.87
MCF2-210ENST00000536274 FAM180AQ6UWF9 173 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 HEPN1Q6WQI6 88 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 CCDC117Q8IWD4 279 aaPredicted RBP3.38□□□□□ -1.87
MCF2-210ENST00000536274 PAQR4Q8N4S7 273 aaPredicted RBP3.38□□□□□ -1.87
MCF2-210ENST00000536274 GPR32P1Q8NGA4 272 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 OR8J2Q8NGG1 315 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 OR51L1Q8NGJ5 315 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 R3HDM4Q96D70 268 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 OTUB2Q96DC9 234 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 ZNF514Q96K75 400 aaPredicted RBP3.38□□□□□ -1.87
MCF2-210ENST00000536274 OR14A2Q96R54 314 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 PCYT2Q99447 389 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 PDCD1LG2Q9BQ51 273 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 CNTNAP3Q9BZ76 1288 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 DPH1Q9BZG8 443 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 CHST8Q9H2A9 424 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 MMP26Q9NRE1 261 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 MAN2C1Q9NTJ4 1040 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 MED17Q9NVC6 651 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 ANKRD10Q9NXR5 420 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms