RNA–Protein interactions for RNA: ENST00000534625.1

ATM-224, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 725 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-224ENST00000534625 NXNQ6DKJ4 435 aa4.48□□□□□ -1.69
ATM-224ENST00000534625 TMEM225Q6GV28 225 aa4.48□□□□□ -1.69
ATM-224ENST00000534625 HMBOX1Q6NT76 420 aa4.48□□□□□ -1.69
ATM-224ENST00000534625 CLEC2AQ6UVW9 174 aa4.48□□□□□ -1.69
ATM-224ENST00000534625 ZNF782Q6ZMW2 699 aaPredicted RBP4.48□□□□□ -1.69
ATM-224ENST00000534625 MSANTD1Q6ZTZ1 278 aa4.48□□□□□ -1.69
ATM-224ENST00000534625 CREB3L2Q70SY1 520 aa4.48□□□□□ -1.69
ATM-224ENST00000534625 CROCCP2Q86T23 111 aa4.48□□□□□ -1.69
ATM-224ENST00000534625 SERPINA11Q86U17 422 aa4.48□□□□□ -1.69
ATM-224ENST00000534625 GPAT4Q86UL3 456 aa4.48□□□□□ -1.69
ATM-224ENST00000534625 POMGNT2Q8NAT1 580 aa4.48□□□□□ -1.69
ATM-224ENST00000534625 SEMA6DQ8NFY4 1073 aa4.48□□□□□ -1.69
ATM-224ENST00000534625 OR9I1Q8NGQ6 314 aa4.48□□□□□ -1.69
ATM-224ENST00000534625 MGARPQ8TDB4 240 aa4.48□□□□□ -1.69
ATM-224ENST00000534625 C10orf105Q8TEF2 133 aa4.48□□□□□ -1.69
ATM-224ENST00000534625 GTF2H4Q92759 462 aa4.48□□□□□ -1.69
ATM-224ENST00000534625 BCL2L2Q92843 193 aaPredicted RBP4.48□□□□□ -1.69
ATM-224ENST00000534625 VPS33AQ96AX1 596 aa4.48□□□□□ -1.69
ATM-224ENST00000534625 C3orf49Q96BT1 292 aa4.48□□□□□ -1.69
ATM-224ENST00000534625 TMEM19Q96HH6 336 aa4.48□□□□□ -1.69
ATM-224ENST00000534625 ITCHQ96J02 903 aa4.48□□□□□ -1.69
ATM-224ENST00000534625 SLC38A2Q96QD8 506 aa4.48□□□□□ -1.69
ATM-224ENST00000534625 OR52B2Q96RD2 323 aa4.48□□□□□ -1.69
ATM-224ENST00000534625 PTDSS2Q9BVG9 487 aa4.48□□□□□ -1.69
ATM-224ENST00000534625 PAIP1Q9H074 479 aaKnown RBP4.48□□□□□ -1.69
ATM-224ENST00000534625 FKRPQ9H9S5 495 aa4.48□□□□□ -1.69
ATM-224ENST00000534625 ADPRHL2Q9NX46 363 aa4.48□□□□□ -1.69
ATM-224ENST00000534625 CALML5Q9NZT1 146 aa4.48□□□□□ -1.69
ATM-224ENST00000534625 MOKQ9UQ07 419 aa4.48□□□□□ -1.69
ATM-224ENST00000534625 IGKV1D-42A0A075B6H8 117 aa4.47□□□□□ -1.69
ATM-224ENST00000534625 A0A096LPI6 279 aa4.47□□□□□ -1.69
ATM-224ENST00000534625 ARPC4-TTLL3A0A0A6YYG9 625 aa4.47□□□□□ -1.69
ATM-224ENST00000534625 IGHV1-18A0A0C4DH31 117 aa4.47□□□□□ -1.69
ATM-224ENST00000534625 FTCDNL1E5RQL4 147 aa4.47□□□□□ -1.69
ATM-224ENST00000534625 ZNF587BE7ETH6 402 aa4.47□□□□□ -1.69
ATM-224ENST00000534625 SLCO1B7G3V0H7 640 aa4.47□□□□□ -1.69
ATM-224ENST00000534625 CLIC1O00299 241 aa4.47□□□□□ -1.69
ATM-224ENST00000534625 NR5A2O00482 541 aa4.47□□□□□ -1.69
ATM-224ENST00000534625 UBDO15205 165 aa4.47□□□□□ -1.69
ATM-224ENST00000534625 ZNF500O60304 480 aaPredicted RBP4.47□□□□□ -1.69
ATM-224ENST00000534625 UPK3AO75631 287 aa4.47□□□□□ -1.69
ATM-224ENST00000534625 VAMP5O95183 116 aa4.47□□□□□ -1.69
ATM-224ENST00000534625 ANP32DO95626 131 aa4.47□□□□□ -1.69
ATM-224ENST00000534625 IGLV1-44P01699 117 aa4.47□□□□□ -1.69
ATM-224ENST00000534625 HNRNPCP07910 306 aaKnown RBP eCLIP4.47□□□□□ -1.69
ATM-224ENST00000534625 CSF3P09919 207 aa4.47□□□□□ -1.69
ATM-224ENST00000534625 IGHV4-31P0DP07 118 aa4.47□□□□□ -1.69
ATM-224ENST00000534625 PNMTP11086 282 aa4.47□□□□□ -1.69
ATM-224ENST00000534625 SLC25A16P16260 332 aa4.47□□□□□ -1.69
ATM-224ENST00000534625 NCF2P19878 526 aaPredicted RBP4.47□□□□□ -1.69
ATM-224ENST00000534625 CALCRP30988 508 aa4.47□□□□□ -1.69
ATM-224ENST00000534625 POLR2JP52435 117 aaKnown RBP4.47□□□□□ -1.69
ATM-224ENST00000534625 MAGOHP61326 146 aaKnown RBP4.47□□□□□ -1.69
ATM-224ENST00000534625 COPZ1P61923 177 aa4.47□□□□□ -1.69
ATM-224ENST00000534625 TUBA1BP68363 451 aa4.47□□□□□ -1.69
ATM-224ENST00000534625 TUBA4AP68366 448 aa4.47□□□□□ -1.69
ATM-224ENST00000534625 CHRNB3Q05901 458 aa4.47□□□□□ -1.69
ATM-224ENST00000534625 TBRG1Q3YBR2 411 aa4.47□□□□□ -1.69
ATM-224ENST00000534625 CHRFAM7AQ494W8 412 aa4.47□□□□□ -1.69
ATM-224ENST00000534625 ZNF311Q5JNZ3 666 aa4.47□□□□□ -1.69
ATM-224ENST00000534625 PRAMEF8Q5VWM4 474 aa4.47□□□□□ -1.69
ATM-224ENST00000534625 PRAMEF7Q5VXH5 474 aa4.47□□□□□ -1.69
ATM-224ENST00000534625 ATG16L1Q676U5 607 aa4.47□□□□□ -1.69
ATM-224ENST00000534625 CYB5R2Q6BCY4 276 aa4.47□□□□□ -1.69
ATM-224ENST00000534625 KRTAP5-11Q6L8G4 156 aa4.47□□□□□ -1.69
ATM-224ENST00000534625 ANKRD16Q6P6B7 361 aa4.47□□□□□ -1.69
ATM-224ENST00000534625 PODNL1Q6PEZ8 512 aa4.47□□□□□ -1.69
ATM-224ENST00000534625 EPGNQ6UW88 154 aa4.47□□□□□ -1.69
ATM-224ENST00000534625 C6orf89Q6UWU4 347 aa4.47□□□□□ -1.69
ATM-224ENST00000534625 TUBA1AQ71U36 451 aa4.47□□□□□ -1.69
ATM-224ENST00000534625 ABHD12BQ7Z5M8 362 aaPredicted RBP4.47□□□□□ -1.69
ATM-224ENST00000534625 COMTD1Q86VU5 262 aa4.47□□□□□ -1.69
ATM-224ENST00000534625 FUNDC1Q8IVP5 155 aa4.47□□□□□ -1.69
ATM-224ENST00000534625 PHC2Q8IXK0 858 aa4.47□□□□□ -1.69
ATM-224ENST00000534625 MSRB3Q8IXL7 192 aa4.47□□□□□ -1.69
ATM-224ENST00000534625 MIER2Q8N344 545 aa4.47□□□□□ -1.69
ATM-224ENST00000534625 KDM8Q8N371 416 aa4.47□□□□□ -1.69
ATM-224ENST00000534625 OR1K1Q8NGR3 316 aa4.47□□□□□ -1.69
ATM-224ENST00000534625 MFSD8Q8NHS3 518 aa4.47□□□□□ -1.69
ATM-224ENST00000534625 MAGEE2Q8TD90 523 aaPredicted RBP4.47□□□□□ -1.69
ATM-224ENST00000534625 PROX1Q92786 737 aa4.47□□□□□ -1.69
ATM-224ENST00000534625 MAL2Q969L2 176 aa4.47□□□□□ -1.69
ATM-224ENST00000534625 TAAR8Q969N4 342 aa4.47□□□□□ -1.69
ATM-224ENST00000534625 TLCD1Q96CP7 247 aa4.47□□□□□ -1.69
ATM-224ENST00000534625 FBXO17Q96EF6 278 aa4.47□□□□□ -1.69
ATM-224ENST00000534625 KTI12Q96EK9 354 aaPredicted RBP4.47□□□□□ -1.69
ATM-224ENST00000534625 TAPBPLQ9BX59 468 aa4.47□□□□□ -1.69
ATM-224ENST00000534625 LINC00470Q9BZP3 86 aa4.47□□□□□ -1.69
ATM-224ENST00000534625 ARMC7Q9H6L4 198 aa4.47□□□□□ -1.69
ATM-224ENST00000534625 RMND5AQ9H871 391 aa4.47□□□□□ -1.69
ATM-224ENST00000534625 BCL2L10Q9HD36 194 aa4.47□□□□□ -1.69
ATM-224ENST00000534625 A4GALTQ9NPC4 353 aa4.47□□□□□ -1.69
ATM-224ENST00000534625 OBP2BQ9NPH6 170 aa4.47□□□□□ -1.69
ATM-224ENST00000534625 SLC52A3Q9NQ40 469 aa4.47□□□□□ -1.69
ATM-224ENST00000534625 TMEM45AQ9NWC5 275 aa4.47□□□□□ -1.69
ATM-224ENST00000534625 TMEM160Q9NX00 188 aa4.47□□□□□ -1.69
ATM-224ENST00000534625 THUMPD1Q9NXG2 353 aaKnown RBP4.47□□□□□ -1.69
ATM-224ENST00000534625 SLC25A37Q9NYZ2 338 aa4.47□□□□□ -1.69
ATM-224ENST00000534625 B3GAT1Q9P2W7 334 aa4.47□□□□□ -1.69
ATM-224ENST00000534625 CRNNQ9UBG3 495 aaPredicted RBP4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms