RNA–Protein interactions for RNA: ENST00000534320.5

PHRF1-206, Transcript of PHD and ring finger domains 1, humanhuman

TSL 5

Gene PHRF1, Length 5,178 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-206ENST00000534320 LGALS14Q8TCE9 139 aa15.78■□□□□ 0.12
PHRF1-206ENST00000534320 RNF128Q8TEB7 428 aa15.78■□□□□ 0.12
PHRF1-206ENST00000534320 SORCS2Q96PQ0 1159 aa15.78■□□□□ 0.12
PHRF1-206ENST00000534320 OR2A14Q96R47 310 aa15.78■□□□□ 0.12
PHRF1-206ENST00000534320 NOX4Q9NPH5 578 aa15.78■□□□□ 0.12
PHRF1-206ENST00000534320 RCE1Q9Y256 329 aa15.78■□□□□ 0.12
PHRF1-206ENST00000534320 LOC102725191A0A1B0GVB3 256 aa15.78■□□□□ 0.12
PHRF1-206ENST00000534320 C5orf67F2Z3F1 127 aa15.78■□□□□ 0.12
PHRF1-206ENST00000534320 G3V3Y1 287 aa15.78■□□□□ 0.12
PHRF1-206ENST00000534320 MED6O75586 246 aa15.78■□□□□ 0.12
PHRF1-206ENST00000534320 S100A8P05109 93 aa15.78■□□□□ 0.12
PHRF1-206ENST00000534320 ALKBH1Q13686 389 aaKnown RBP15.78■□□□□ 0.12
PHRF1-206ENST00000534320 MEF2DQ14814 521 aa15.78■□□□□ 0.12
PHRF1-206ENST00000534320 MRPL21Q7Z2W9 205 aaKnown RBP15.78■□□□□ 0.12
PHRF1-206ENST00000534320 TM9SF4Q92544 642 aa15.78■□□□□ 0.12
PHRF1-206ENST00000534320 MBD1Q9UIS9 605 aaPredicted RBP15.78■□□□□ 0.12
PHRF1-206ENST00000534320 PPT1P50897 306 aa15.78■□□□□ 0.12
PHRF1-206ENST00000534320 HYAL4Q2M3T9 481 aa15.78■□□□□ 0.12
PHRF1-206ENST00000534320 SOWAHCQ53LP3 525 aaPredicted RBP15.78■□□□□ 0.12
PHRF1-206ENST00000534320 ZMAT1Q5H9K5 638 aa15.78■□□□□ 0.12
PHRF1-206ENST00000534320 HCAR1Q9BXC0 346 aa15.78■□□□□ 0.12
PHRF1-206ENST00000534320 METTL17Q9H7H0 456 aaPredicted RBP15.78■□□□□ 0.12
PHRF1-206ENST00000534320 CDH20Q9HBT6 801 aa15.78■□□□□ 0.12
PHRF1-206ENST00000534320 ZC3H12DA2A288 527 aaKnown RBP15.77■□□□□ 0.12
PHRF1-206ENST00000534320 EIF1P41567 113 aaKnown RBP15.77■□□□□ 0.12
PHRF1-206ENST00000534320 NDUFA6P56556 154 aa15.77■□□□□ 0.12
PHRF1-206ENST00000534320 RRAS2P62070 204 aaPredicted RBP15.77■□□□□ 0.12
PHRF1-206ENST00000534320 YIF1BQ5BJH7 314 aa15.77■□□□□ 0.12
PHRF1-206ENST00000534320 USP51Q70EK9 711 aa15.77■□□□□ 0.12
PHRF1-206ENST00000534320 ENKD1Q9H0I2 346 aa15.77■□□□□ 0.12
PHRF1-206ENST00000534320 IDSB3KWA1 339 aa15.77■□□□□ 0.12
PHRF1-206ENST00000534320 RAB31Q13636 194 aa15.77■□□□□ 0.12
PHRF1-206ENST00000534320 MEP1BQ16820 701 aa15.77■□□□□ 0.12
PHRF1-206ENST00000534320 TMEM201Q5SNT2 666 aa15.77■□□□□ 0.12
PHRF1-206ENST00000534320 FAM57BQ71RH2 274 aa15.77■□□□□ 0.12
PHRF1-206ENST00000534320 TMEM99Q8N816 258 aa15.77■□□□□ 0.12
PHRF1-206ENST00000534320 ARHGAP9Q9BRR9 750 aa15.77■□□□□ 0.12
PHRF1-206ENST00000534320 ACAD8Q9UKU7 415 aa15.77■□□□□ 0.12
PHRF1-206ENST00000534320 PADI1Q9ULC6 663 aa15.77■□□□□ 0.12
PHRF1-206ENST00000534320 PCDHGA5Q9Y5G8 931 aa15.77■□□□□ 0.12
PHRF1-206ENST00000534320 KCNE3Q9Y6H6 103 aa15.77■□□□□ 0.12
PHRF1-206ENST00000534320 DOCK3Q8IZD9 2030 aa15.77■□□□□ 0.11
PHRF1-206ENST00000534320 SLC22A6Q4U2R8 563 aa15.77■□□□□ 0.11
PHRF1-206ENST00000534320 STT3BQ8TCJ2 826 aa15.77■□□□□ 0.11
PHRF1-206ENST00000534320 PLEKHJ1Q9NW61 149 aa15.77■□□□□ 0.11
PHRF1-206ENST00000534320 MOSPD3O75425 235 aa15.77■□□□□ 0.11
PHRF1-206ENST00000534320 LALBAP00709 142 aa15.77■□□□□ 0.11
PHRF1-206ENST00000534320 COL9A1P20849 921 aa15.77■□□□□ 0.11
PHRF1-206ENST00000534320 AMER3Q8N944 861 aa15.77■□□□□ 0.11
PHRF1-206ENST00000534320 PHYHIPQ92561 330 aa15.77■□□□□ 0.11
PHRF1-206ENST00000534320 OCSTAMPQ9BR26 566 aa15.77■□□□□ 0.11
PHRF1-206ENST00000534320 RHNO1Q9BSD3 238 aa15.77■□□□□ 0.11
PHRF1-206ENST00000534320 TO15178 435 aa15.76■□□□□ 0.11
PHRF1-206ENST00000534320 GPX5O75715 221 aa15.76■□□□□ 0.11
PHRF1-206ENST00000534320 WISP3O95389 354 aaPredicted RBP15.76■□□□□ 0.11
PHRF1-206ENST00000534320 GLB1P16278 677 aa15.76■□□□□ 0.11
PHRF1-206ENST00000534320 HOXB9P17482 250 aaPredicted RBP15.76■□□□□ 0.11
PHRF1-206ENST00000534320 MSX1P28360 303 aa15.76■□□□□ 0.11
PHRF1-206ENST00000534320 IL13RA1P78552 427 aa15.76■□□□□ 0.11
PHRF1-206ENST00000534320 VASH1Q7L8A9 365 aaPredicted RBP15.76■□□□□ 0.11
PHRF1-206ENST00000534320 ZNF439Q8NDP4 499 aa15.76■□□□□ 0.11
PHRF1-206ENST00000534320 NDUFB11Q9NX14 153 aa15.76■□□□□ 0.11
PHRF1-206ENST00000534320 WIF1Q9Y5W5 379 aa15.76■□□□□ 0.11
PHRF1-206ENST00000534320 OTOL1A6NHN0 477 aaPredicted RBP15.76■□□□□ 0.11
PHRF1-206ENST00000534320 LILRA5A6NI73 299 aa15.76■□□□□ 0.11
PHRF1-206ENST00000534320 ADAM23O75077 832 aa15.76■□□□□ 0.11
PHRF1-206ENST00000534320 SF3B4Q15427 424 aaKnown RBP eCLIP15.76■□□□□ 0.113e-7■■■■□ 22.9
PHRF1-206ENST00000534320 NIPAL3Q6P499 406 aa15.76■□□□□ 0.11
PHRF1-206ENST00000534320 PXT1Q8NFP0 134 aa15.76■□□□□ 0.11
PHRF1-206ENST00000534320 LMO7DNF2Z398 122 aa15.76■□□□□ 0.11
PHRF1-206ENST00000534320 APLNRP35414 380 aa15.76■□□□□ 0.11
PHRF1-206ENST00000534320 LYSMD2Q8IV50 215 aa15.76■□□□□ 0.11
PHRF1-206ENST00000534320 SLC25A46Q96AG3 418 aa15.76■□□□□ 0.11
PHRF1-206ENST00000534320 ZNF775Q96BV0 537 aaPredicted RBP15.76■□□□□ 0.11
PHRF1-206ENST00000534320 ST6GALNAC5Q9BVH7 336 aa15.76■□□□□ 0.11
PHRF1-206ENST00000534320 J3QR89 54 aa15.76■□□□□ 0.11
PHRF1-206ENST00000534320 FABP7O15540 132 aa15.76■□□□□ 0.11
PHRF1-206ENST00000534320 SLC43A1O75387 559 aa15.76■□□□□ 0.11
PHRF1-206ENST00000534320 KNG1P01042 644 aa15.76■□□□□ 0.11
PHRF1-206ENST00000534320 HIST1H1CP16403 213 aaKnown RBP15.76■□□□□ 0.11
PHRF1-206ENST00000534320 CPEP16870 476 aa15.76■□□□□ 0.11
PHRF1-206ENST00000534320 PCBD1P61457 104 aa15.76■□□□□ 0.11
PHRF1-206ENST00000534320 CNN3Q15417 329 aaKnown RBP15.76■□□□□ 0.11
PHRF1-206ENST00000534320 GLB1L2Q8IW92 636 aa15.76■□□□□ 0.11
PHRF1-206ENST00000534320 TXN2Q99757 166 aa15.76■□□□□ 0.11
PHRF1-206ENST00000534320 DSCR3O14972 297 aa15.75■□□□□ 0.11
PHRF1-206ENST00000534320 LINC00346Q8IVM7 164 aa15.75■□□□□ 0.11
PHRF1-206ENST00000534320 LRRC18Q8N456 261 aa15.75■□□□□ 0.11
PHRF1-206ENST00000534320 GABRG3Q99928 467 aa15.75■□□□□ 0.11
PHRF1-206ENST00000534320 RBFOX1Q9NWB1 397 aaKnown RBP15.75■□□□□ 0.11
PHRF1-206ENST00000534320 FBXO7Q9Y3I1 522 aa15.75■□□□□ 0.11
PHRF1-206ENST00000534320 UBL3O95164 117 aa15.75■□□□□ 0.11
PHRF1-206ENST00000534320 RPL27P61353 136 aaKnown RBP15.75■□□□□ 0.11
PHRF1-206ENST00000534320 FOXK1P85037 733 aa15.75■□□□□ 0.11
PHRF1-206ENST00000534320 GPNMBQ14956 572 aa15.75■□□□□ 0.11
PHRF1-206ENST00000534320 APOOLQ6UXV4 268 aa15.75■□□□□ 0.11
PHRF1-206ENST00000534320 H1FNTQ75WM6 255 aaPredicted RBP15.75■□□□□ 0.11
PHRF1-206ENST00000534320 OR6V1Q8N148 313 aa15.75■□□□□ 0.11
PHRF1-206ENST00000534320 SIRT5Q9NXA8 310 aa15.75■□□□□ 0.11
PHRF1-206ENST00000534320 RHBDD3Q9Y3P4 386 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms