RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 DUX3Q96PT4 197 aa3.79□□□□□ -1.8
ITGB1-219ENST00000534049 GAL3ST4Q96RP7 486 aa3.79□□□□□ -1.8
ITGB1-219ENST00000534049 MCCC1Q96RQ3 725 aaPredicted RBP3.79□□□□□ -1.8
ITGB1-219ENST00000534049 GAD1Q99259 594 aa3.79□□□□□ -1.8
ITGB1-219ENST00000534049 RNF2Q99496 336 aa3.79□□□□□ -1.8
ITGB1-219ENST00000534049 MTERF1Q99551 399 aaKnown RBP3.79□□□□□ -1.8
ITGB1-219ENST00000534049 PIGQQ9BRB3 760 aa3.79□□□□□ -1.8
ITGB1-219ENST00000534049 WRAP53Q9BUR4 548 aaKnown RBP3.79□□□□□ -1.8
ITGB1-219ENST00000534049 PHF7Q9BWX1 381 aaPredicted RBP3.79□□□□□ -1.8
ITGB1-219ENST00000534049 WWTR1Q9GZV5 400 aa3.79□□□□□ -1.8
ITGB1-219ENST00000534049 RAB33BQ9H082 229 aa3.79□□□□□ -1.8
ITGB1-219ENST00000534049 POLR3FQ9H1D9 316 aaPredicted RBP3.79□□□□□ -1.8
ITGB1-219ENST00000534049 PTGES2Q9H7Z7 377 aa3.79□□□□□ -1.8
ITGB1-219ENST00000534049 BPIFA1Q9NP55 256 aa3.79□□□□□ -1.8
ITGB1-219ENST00000534049 NOX4Q9NPH5 578 aa3.79□□□□□ -1.8
ITGB1-219ENST00000534049 MIEF1Q9NQG6 463 aa3.79□□□□□ -1.8
ITGB1-219ENST00000534049 CHRAC1Q9NRG0 131 aa3.79□□□□□ -1.8
ITGB1-219ENST00000534049 AGPAT4Q9NRZ5 378 aa3.79□□□□□ -1.8
ITGB1-219ENST00000534049 GPR173Q9NS66 373 aa3.79□□□□□ -1.8
ITGB1-219ENST00000534049 ZCCHC3Q9NUD5 404 aaKnown RBP3.79□□□□□ -1.8
ITGB1-219ENST00000534049 CLEC5AQ9NY25 188 aa3.79□□□□□ -1.8
ITGB1-219ENST00000534049 C1RLQ9NZP8 487 aa3.79□□□□□ -1.8
ITGB1-219ENST00000534049 SMPXQ9UHP9 88 aa3.79□□□□□ -1.8
ITGB1-219ENST00000534049 POMT2Q9UKY4 750 aa3.79□□□□□ -1.8
ITGB1-219ENST00000534049 ZNF490Q9ULM2 529 aaPredicted RBP3.79□□□□□ -1.8
ITGB1-219ENST00000534049 NENFQ9UMX5 172 aa3.79□□□□□ -1.8
ITGB1-219ENST00000534049 PSG11Q9UQ72 335 aa3.79□□□□□ -1.8
ITGB1-219ENST00000534049 TCF19Q9Y242 345 aa3.79□□□□□ -1.8
ITGB1-219ENST00000534049 OR51B4Q9Y5P0 310 aa3.79□□□□□ -1.8
ITGB1-219ENST00000534049 MMP24Q9Y5R2 645 aa3.79□□□□□ -1.8
ITGB1-219ENST00000534049 WIF1Q9Y5W5 379 aa3.79□□□□□ -1.8
ITGB1-219ENST00000534049 PTPRFP10586 1907 aa3.79□□□□□ -1.8
ITGB1-219ENST00000534049 CEP290O15078 2479 aa3.79□□□□□ -1.8
ITGB1-219ENST00000534049 MUC3AQ02505 3323 aa3.78□□□□□ -1.8
ITGB1-219ENST00000534049 C20orf202A1L168 122 aa3.78□□□□□ -1.8
ITGB1-219ENST00000534049 C7orf66A4D0T2 115 aa3.78□□□□□ -1.8
ITGB1-219ENST00000534049 NKX6-3A6NJ46 265 aa3.78□□□□□ -1.8
ITGB1-219ENST00000534049 ANHXE9PGG2 379 aa3.78□□□□□ -1.8
ITGB1-219ENST00000534049 INMT-MINDY4F8WBC2 141 aa3.78□□□□□ -1.8
ITGB1-219ENST00000534049 ANKRD28O15084 1053 aa3.78□□□□□ -1.8
ITGB1-219ENST00000534049 OGG1O15527 345 aa3.78□□□□□ -1.8
ITGB1-219ENST00000534049 TGOLN2O43493 480 aa3.78□□□□□ -1.8
ITGB1-219ENST00000534049 TLX2O43763 284 aaPredicted RBP3.78□□□□□ -1.8
ITGB1-219ENST00000534049 AIREO43918 545 aa3.78□□□□□ -1.8
ITGB1-219ENST00000534049 RDH16O75452 317 aa3.78□□□□□ -1.8
ITGB1-219ENST00000534049 ZMPSTE24O75844 475 aa3.78□□□□□ -1.8
ITGB1-219ENST00000534049 GAS8-AS1O95177 125 aa3.78□□□□□ -1.8
ITGB1-219ENST00000534049 C6orf47O95873 294 aa3.78□□□□□ -1.8
ITGB1-219ENST00000534049 HPP00738 406 aa3.78□□□□□ -1.8
ITGB1-219ENST00000534049 SERPINA1P01009 418 aa3.78□□□□□ -1.8
ITGB1-219ENST00000534049 MMP1P03956 469 aa3.78□□□□□ -1.8
ITGB1-219ENST00000534049 SERPINE1P05121 402 aa3.78□□□□□ -1.8
ITGB1-219ENST00000534049 GIMD1P0DJR0 217 aa3.78□□□□□ -1.8
ITGB1-219ENST00000534049 C1GALT1C1LP0DN25 315 aa3.78□□□□□ -1.8
ITGB1-219ENST00000534049 CALCBP10092 127 aa3.78□□□□□ -1.8
ITGB1-219ENST00000534049 GTF2F2P13984 249 aa3.78□□□□□ -1.8
ITGB1-219ENST00000534049 NCF1P14598 390 aaPredicted RBP3.78□□□□□ -1.8
ITGB1-219ENST00000534049 ZNF14P17017 642 aaPredicted RBP3.78□□□□□ -1.8
ITGB1-219ENST00000534049 NELFEP18615 380 aaKnown RBP3.78□□□□□ -1.8
ITGB1-219ENST00000534049 ZNF10P21506 573 aaPredicted RBP3.78□□□□□ -1.8
ITGB1-219ENST00000534049 GLRA1P23415 457 aa3.78□□□□□ -1.8
ITGB1-219ENST00000534049 IVDP26440 423 aa3.78□□□□□ -1.8
ITGB1-219ENST00000534049 HTR2AP28223 471 aa3.78□□□□□ -1.8
ITGB1-219ENST00000534049 ELK4P28324 431 aa3.78□□□□□ -1.8
ITGB1-219ENST00000534049 LCN1P31025 176 aa3.78□□□□□ -1.8
ITGB1-219ENST00000534049 TLX1P31314 330 aaPredicted RBP3.78□□□□□ -1.8
ITGB1-219ENST00000534049 GCLMP48507 274 aa3.78□□□□□ -1.8
ITGB1-219ENST00000534049 FMO5P49326 533 aa3.78□□□□□ -1.8
ITGB1-219ENST00000534049 MRPL19P49406 292 aaKnown RBP3.78□□□□□ -1.8
ITGB1-219ENST00000534049 NUDT2P50583 147 aa3.78□□□□□ -1.8
ITGB1-219ENST00000534049 TDGF1P3P51864 188 aa3.78□□□□□ -1.8
ITGB1-219ENST00000534049 METAP1P53582 386 aa3.78□□□□□ -1.8
ITGB1-219ENST00000534049 DNAJB13P59910 316 aa3.78□□□□□ -1.8
ITGB1-219ENST00000534049 UBE2G2P60604 165 aa3.78□□□□□ -1.8
ITGB1-219ENST00000534049 PITX1P78337 314 aaPredicted RBP3.78□□□□□ -1.8
ITGB1-219ENST00000534049 RPL19P84098 196 aaKnown RBP3.78□□□□□ -1.8
ITGB1-219ENST00000534049 SPIBQ01892 262 aa3.78□□□□□ -1.8
ITGB1-219ENST00000534049 IRF8Q02556 426 aa3.78□□□□□ -1.8
ITGB1-219ENST00000534049 TLE2Q04725 743 aa3.78□□□□□ -1.8
ITGB1-219ENST00000534049 EMX1Q04741 257 aaPredicted RBP3.78□□□□□ -1.8
ITGB1-219ENST00000534049 SRSF5Q13243 272 aaKnown RBP3.78□□□□□ -1.8
ITGB1-219ENST00000534049 CEACAM7Q14002 265 aa3.78□□□□□ -1.8
ITGB1-219ENST00000534049 SLC10A1Q14973 349 aa3.78□□□□□ -1.8
ITGB1-219ENST00000534049 SF3A2Q15428 464 aaKnown RBP3.78□□□□□ -1.8
ITGB1-219ENST00000534049 HMGN3Q15651 99 aa3.78□□□□□ -1.8
ITGB1-219ENST00000534049 SNAPC1Q16533 368 aa3.78□□□□□ -1.8
ITGB1-219ENST00000534049 LGALSLQ3ZCW2 172 aaPredicted RBP3.78□□□□□ -1.8
ITGB1-219ENST00000534049 TEX44Q53QW1 395 aa3.78□□□□□ -1.8
ITGB1-219ENST00000534049 ZNF667Q5HYK9 610 aa3.78□□□□□ -1.8
ITGB1-219ENST00000534049 CELF3Q5SZQ8 465 aaKnown RBP3.78□□□□□ -1.8
ITGB1-219ENST00000534049 AKR1C8PQ5T2L2 129 aa3.78□□□□□ -1.8
ITGB1-219ENST00000534049 NKAIN2Q5VXU1 208 aa3.78□□□□□ -1.8
ITGB1-219ENST00000534049 TMEM236Q5W0B7 351 aa3.78□□□□□ -1.8
ITGB1-219ENST00000534049 KRTAP5-11Q6L8G4 156 aa3.78□□□□□ -1.8
ITGB1-219ENST00000534049 ADAM5Q6NVV9 412 aa3.78□□□□□ -1.8
ITGB1-219ENST00000534049 CDC42EP5Q6NZY7 148 aa3.78□□□□□ -1.8
ITGB1-219ENST00000534049 KCTD18Q6PI47 426 aaPredicted RBP3.78□□□□□ -1.8
ITGB1-219ENST00000534049 MOXD1Q6UVY6 613 aa3.78□□□□□ -1.8
ITGB1-219ENST00000534049 SCIMPQ6UWF3 145 aa3.78□□□□□ -1.8
ITGB1-219ENST00000534049 FAM220AQ7Z4H9 259 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms