RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 CDAP32320 146 aa9□□□□□ -0.97
CAPN1-225ENST00000533704 NR4A2P43354 598 aa9□□□□□ -0.97
CAPN1-225ENST00000533704 GPR4P46093 362 aa9□□□□□ -0.97
CAPN1-225ENST00000533704 CTXN1P60606 82 aa9□□□□□ -0.97
CAPN1-225ENST00000533704 PSME3P61289 254 aa9□□□□□ -0.97
CAPN1-225ENST00000533704 RPS23P62266 143 aaKnown RBP9□□□□□ -0.97
CAPN1-225ENST00000533704 VLDLRP98155 873 aa9□□□□□ -0.97
CAPN1-225ENST00000533704 HSF2Q03933 536 aa9□□□□□ -0.97
CAPN1-225ENST00000533704 FMODQ06828 376 aa9□□□□□ -0.97
CAPN1-225ENST00000533704 MAD2L1BPQ15013 274 aaPredicted RBP9□□□□□ -0.97
CAPN1-225ENST00000533704 TRAM2Q15035 370 aa9□□□□□ -0.97
CAPN1-225ENST00000533704 SGCAQ16586 387 aa9□□□□□ -0.97
CAPN1-225ENST00000533704 MSMPQ1L6U9 139 aa9□□□□□ -0.97
CAPN1-225ENST00000533704 SLC36A2Q495M3 483 aa9□□□□□ -0.97
CAPN1-225ENST00000533704 ALG10Q5BKT4 473 aa9□□□□□ -0.97
CAPN1-225ENST00000533704 C6orf52Q5T4I8 152 aa9□□□□□ -0.97
CAPN1-225ENST00000533704 CYB5R2Q6BCY4 276 aa9□□□□□ -0.97
CAPN1-225ENST00000533704 ZNF730Q6ZMV8 503 aa9□□□□□ -0.97
CAPN1-225ENST00000533704 OFCC1Q8IZS5 231 aa9□□□□□ -0.97
CAPN1-225ENST00000533704 PIP4P2Q8N4L2 257 aa9□□□□□ -0.97
CAPN1-225ENST00000533704 ICA1LQ8NDH6 482 aa9□□□□□ -0.97
CAPN1-225ENST00000533704 RBM15BQ8NDT2 890 aaKnown RBP9□□□□□ -0.97
CAPN1-225ENST00000533704 SLC30A7Q8NEW0 376 aa9□□□□□ -0.97
CAPN1-225ENST00000533704 OR51A7Q8NH64 312 aa9□□□□□ -0.97
CAPN1-225ENST00000533704 NEU4Q8WWR8 484 aaPredicted RBP9□□□□□ -0.97
CAPN1-225ENST00000533704 HDAC2Q92769 488 aaKnown RBP9□□□□□ -0.97
CAPN1-225ENST00000533704 MRPL24Q96A35 216 aaKnown RBP9□□□□□ -0.97
CAPN1-225ENST00000533704 KCNK17Q96T54 332 aa9□□□□□ -0.97
CAPN1-225ENST00000533704 NSRP1Q9H0G5 558 aaKnown RBP9□□□□□ -0.97
CAPN1-225ENST00000533704 KCNN2Q9H2S1 579 aa9□□□□□ -0.97
CAPN1-225ENST00000533704 DENND2DQ9H6A0 471 aaPredicted RBP9□□□□□ -0.97
CAPN1-225ENST00000533704 CHODLQ9H9P2 273 aa9□□□□□ -0.97
CAPN1-225ENST00000533704 MYOZ1Q9NP98 299 aaPredicted RBP9□□□□□ -0.97
CAPN1-225ENST00000533704 CCNB1IP1Q9NPC3 277 aa9□□□□□ -0.97
CAPN1-225ENST00000533704 ADA2Q9NZK5 511 aa9□□□□□ -0.97
CAPN1-225ENST00000533704 STX18Q9P2W9 335 aaKnown RBP9□□□□□ -0.97
CAPN1-225ENST00000533704 FBXO9Q9UK97 447 aaPredicted RBP9□□□□□ -0.97
CAPN1-225ENST00000533704 IGHV4-61A0A0C4DH41 118 aa8.99□□□□□ -0.97
CAPN1-225ENST00000533704 IQCMA0A1B0GVH7 501 aa8.99□□□□□ -0.97
CAPN1-225ENST00000533704 EFCAB9A8MZ26 197 aa8.99□□□□□ -0.97
CAPN1-225ENST00000533704 LYNX1G3V0Z9 82 aa8.99□□□□□ -0.97
CAPN1-225ENST00000533704 M0R233 179 aa8.99□□□□□ -0.97
CAPN1-225ENST00000533704 SYNGR3O43761 229 aa8.99□□□□□ -0.97
CAPN1-225ENST00000533704 STAMBPO95630 424 aa8.99□□□□□ -0.97
CAPN1-225ENST00000533704 IGF2P01344 180 aa8.99□□□□□ -0.97
CAPN1-225ENST00000533704 LCKP06239 509 aa8.99□□□□□ -0.97
CAPN1-225ENST00000533704 IGHV4-31P0DP07 118 aa8.99□□□□□ -0.97
CAPN1-225ENST00000533704 LYNX1P0DP58 116 aa8.99□□□□□ -0.97
CAPN1-225ENST00000533704 CCNOP22674 350 aa8.99□□□□□ -0.97
CAPN1-225ENST00000533704 GLRXP35754 106 aa8.99□□□□□ -0.97
CAPN1-225ENST00000533704 ALDH3B1P43353 468 aa8.99□□□□□ -0.97
CAPN1-225ENST00000533704 CBX1P83916 185 aa8.99□□□□□ -0.97
CAPN1-225ENST00000533704 PLP2Q04941 152 aa8.99□□□□□ -0.97
CAPN1-225ENST00000533704 ALKBH6Q3KRA9 238 aa8.99□□□□□ -0.97
CAPN1-225ENST00000533704 CHRFAM7AQ494W8 412 aa8.99□□□□□ -0.97
CAPN1-225ENST00000533704 ARMC4Q5T2S8 1044 aa8.99□□□□□ -0.97
CAPN1-225ENST00000533704 TBPL2Q6SJ96 375 aa8.99□□□□□ -0.97
CAPN1-225ENST00000533704 HACD2Q6Y1H2 254 aa8.99□□□□□ -0.97
CAPN1-225ENST00000533704 CBLL1Q75N03 491 aa8.99□□□□□ -0.97
CAPN1-225ENST00000533704 ZNF771Q7L3S4 317 aaPredicted RBP8.99□□□□□ -0.97
CAPN1-225ENST00000533704 RRM2BQ7LG56 351 aa8.99□□□□□ -0.97
CAPN1-225ENST00000533704 CPLX4Q7Z7G2 160 aa8.99□□□□□ -0.97
CAPN1-225ENST00000533704 LRP11Q86VZ4 500 aa8.99□□□□□ -0.97
CAPN1-225ENST00000533704 CYP4Z1Q86W10 505 aa8.99□□□□□ -0.97
CAPN1-225ENST00000533704 ZNF584Q8IVC4 421 aa8.99□□□□□ -0.97
CAPN1-225ENST00000533704 PAQR4Q8N4S7 273 aaPredicted RBP8.99□□□□□ -0.97
CAPN1-225ENST00000533704 RNF148Q8N7C7 305 aa8.99□□□□□ -0.97
CAPN1-225ENST00000533704 CLDN22Q8N7P3 220 aa8.99□□□□□ -0.97
CAPN1-225ENST00000533704 OR13C2Q8NGS9 318 aa8.99□□□□□ -0.97
CAPN1-225ENST00000533704 UBASH3BQ8TF42 649 aa8.99□□□□□ -0.97
CAPN1-225ENST00000533704 CMTM5Q96DZ9 223 aa8.99□□□□□ -0.97
CAPN1-225ENST00000533704 MRPL13Q9BYD1 178 aaKnown RBP8.99□□□□□ -0.97
CAPN1-225ENST00000533704 BPESC1Q9GZL8 116 aa8.99□□□□□ -0.97
CAPN1-225ENST00000533704 TXNIPQ9H3M7 391 aa8.99□□□□□ -0.97
CAPN1-225ENST00000533704 MAN2C1Q9NTJ4 1040 aa8.99□□□□□ -0.97
CAPN1-225ENST00000533704 MYEF2Q9P2K5 600 aaKnown RBP8.99□□□□□ -0.97
CAPN1-225ENST00000533704 REV1Q9UBZ9 1251 aa8.99□□□□□ -0.97
CAPN1-225ENST00000533704 EGFL7Q9UHF1 273 aa8.99□□□□□ -0.97
CAPN1-225ENST00000533704 SLC7A8Q9UHI5 535 aa8.99□□□□□ -0.97
CAPN1-225ENST00000533704 HIF3AQ9Y2N7 669 aa8.99□□□□□ -0.97
CAPN1-225ENST00000533704 V9GYQ6 96 aa8.99□□□□□ -0.97
CAPN1-225ENST00000533704 IGKV1D-43A0A0B4J1Z2 117 aa8.98□□□□□ -0.97
CAPN1-225ENST00000533704 LOC100289279A0A1B0GTE1 492 aa8.98□□□□□ -0.97
CAPN1-225ENST00000533704 A0A1W2PPL8 197 aa8.98□□□□□ -0.97
CAPN1-225ENST00000533704 LRP5LA4QPB2 252 aa8.98□□□□□ -0.97
CAPN1-225ENST00000533704 CENPBD1B2RD01 187 aa8.98□□□□□ -0.97
CAPN1-225ENST00000533704 VWC2LB2RUY7 222 aa8.98□□□□□ -0.97
CAPN1-225ENST00000533704 H7C1C5 153 aa8.98□□□□□ -0.97
CAPN1-225ENST00000533704 NDUFAB1O14561 156 aa8.98□□□□□ -0.97
CAPN1-225ENST00000533704 FFAR1O14842 300 aa8.98□□□□□ -0.97
CAPN1-225ENST00000533704 ATP8B1O43520 1251 aa8.98□□□□□ -0.97
CAPN1-225ENST00000533704 GMNNO75496 209 aa8.98□□□□□ -0.97
CAPN1-225ENST00000533704 PTHP01270 115 aa8.98□□□□□ -0.97
CAPN1-225ENST00000533704 APEX1P27695 318 aaKnown RBP8.98□□□□□ -0.97
CAPN1-225ENST00000533704 APLNRP35414 380 aa8.98□□□□□ -0.97
CAPN1-225ENST00000533704 RPL4P36578 427 aaKnown RBP8.98□□□□□ -0.97
CAPN1-225ENST00000533704 GZMKP49863 264 aa8.98□□□□□ -0.97
CAPN1-225ENST00000533704 GYS2P54840 703 aa8.98□□□□□ -0.97
CAPN1-225ENST00000533704 RPL27P61353 136 aaKnown RBP8.98□□□□□ -0.97
CAPN1-225ENST00000533704 LCN6P62502 163 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms