RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 PLA2G10O15496 165 aa7.35□□□□□ -1.23
NEDD8-207ENST00000533242 PLOD3O60568 738 aa7.35□□□□□ -1.23
NEDD8-207ENST00000533242 HPGDSO60760 199 aa7.35□□□□□ -1.23
NEDD8-207ENST00000533242 TRIM3O75382 744 aaPredicted RBP7.35□□□□□ -1.23
NEDD8-207ENST00000533242 STX11O75558 287 aa7.35□□□□□ -1.23
NEDD8-207ENST00000533242 REM1O75628 298 aa7.35□□□□□ -1.23
NEDD8-207ENST00000533242 FBXO45P0C2W1 286 aa7.35□□□□□ -1.23
NEDD8-207ENST00000533242 IFI30P13284 250 aa7.35□□□□□ -1.23
NEDD8-207ENST00000533242 GDF1P27539 372 aa7.35□□□□□ -1.23
NEDD8-207ENST00000533242 FGF9P31371 208 aaPredicted RBP7.35□□□□□ -1.23
NEDD8-207ENST00000533242 GABRA3P34903 492 aa7.35□□□□□ -1.23
NEDD8-207ENST00000533242 HTR3AP46098 478 aa7.35□□□□□ -1.23
NEDD8-207ENST00000533242 EMDP50402 254 aa7.35□□□□□ -1.23
NEDD8-207ENST00000533242 IGLV3-21P80748 117 aaPredicted RBP7.35□□□□□ -1.23
NEDD8-207ENST00000533242 IFITM2Q01629 132 aa7.35□□□□□ -1.23
NEDD8-207ENST00000533242 RUNX1T1Q06455 604 aa7.35□□□□□ -1.23
NEDD8-207ENST00000533242 FHL1Q13642 323 aa7.35□□□□□ -1.23
NEDD8-207ENST00000533242 POU4F3Q15319 338 aa7.35□□□□□ -1.23
NEDD8-207ENST00000533242 PRAMEF20Q5VT98 475 aa7.35□□□□□ -1.23
NEDD8-207ENST00000533242 AGAP6Q5VW22 663 aa7.35□□□□□ -1.23
NEDD8-207ENST00000533242 NIPAL3Q6P499 406 aa7.35□□□□□ -1.23
NEDD8-207ENST00000533242 ZNF322Q6U7Q0 402 aaPredicted RBP7.35□□□□□ -1.23
NEDD8-207ENST00000533242 C9orf40Q8IXQ3 194 aa7.35□□□□□ -1.23
NEDD8-207ENST00000533242 COX18Q8N8Q8 333 aa7.35□□□□□ -1.23
NEDD8-207ENST00000533242 CYB561A3Q8NBI2 242 aa7.35□□□□□ -1.23
NEDD8-207ENST00000533242 ATP6V1C2Q8NEY4 427 aa7.35□□□□□ -1.23
NEDD8-207ENST00000533242 FANK1Q8TC84 345 aa7.35□□□□□ -1.23
NEDD8-207ENST00000533242 TMEM239Q8WW34 195 aa7.35□□□□□ -1.23
NEDD8-207ENST00000533242 CTHRC1Q96CG8 243 aa7.35□□□□□ -1.23
NEDD8-207ENST00000533242 DIRAS2Q96HU8 199 aa7.35□□□□□ -1.23
NEDD8-207ENST00000533242 FAM210AQ96ND0 272 aa7.35□□□□□ -1.23
NEDD8-207ENST00000533242 C11orf54Q9H0W9 315 aaPredicted RBP7.35□□□□□ -1.23
NEDD8-207ENST00000533242 B3GAT2Q9NPZ5 323 aa7.35□□□□□ -1.23
NEDD8-207ENST00000533242 CAMK2AQ9UQM7 478 aa7.35□□□□□ -1.23
NEDD8-207ENST00000533242 CHCHD2Q9Y6H1 151 aaPredicted RBP7.35□□□□□ -1.23
NEDD8-207ENST00000533242 A0A1W2PPR1 153 aa7.35□□□□□ -1.23
NEDD8-207ENST00000533242 FABP12A6NFH5 140 aa7.35□□□□□ -1.23
NEDD8-207ENST00000533242 UNC119BA6NIH7 251 aa7.35□□□□□ -1.23
NEDD8-207ENST00000533242 EEF1E1-BLOC1S5C9J1V9 151 aa7.35□□□□□ -1.23
NEDD8-207ENST00000533242 EEF1E1O43324 174 aaKnown RBP7.35□□□□□ -1.23
NEDD8-207ENST00000533242 DYRK3O43781 588 aa7.35□□□□□ -1.23
NEDD8-207ENST00000533242 GPR75O95800 540 aa7.35□□□□□ -1.23
NEDD8-207ENST00000533242 IGKV3-11P04433 115 aa7.35□□□□□ -1.23
NEDD8-207ENST00000533242 HPNP05981 417 aa7.35□□□□□ -1.23
NEDD8-207ENST00000533242 GYPBP06028 91 aa7.35□□□□□ -1.23
NEDD8-207ENST00000533242 THBS1P07996 1170 aa7.35□□□□□ -1.23
NEDD8-207ENST00000533242 MRPL3P09001 348 aaKnown RBP7.35□□□□□ -1.23
NEDD8-207ENST00000533242 S1PR1P21453 382 aa7.35□□□□□ -1.23
NEDD8-207ENST00000533242 TLX1P31314 330 aaPredicted RBP7.35□□□□□ -1.23
NEDD8-207ENST00000533242 OR2B6P58173 313 aa7.35□□□□□ -1.23
NEDD8-207ENST00000533242 PSG6Q00889 435 aa7.35□□□□□ -1.23
NEDD8-207ENST00000533242 BIKQ13323 160 aa7.35□□□□□ -1.23
NEDD8-207ENST00000533242 NNATQ16517 81 aa7.35□□□□□ -1.23
NEDD8-207ENST00000533242 NDUFAF6Q330K2 333 aa7.35□□□□□ -1.23
NEDD8-207ENST00000533242 PDZK1Q5T2W1 519 aa7.35□□□□□ -1.23
NEDD8-207ENST00000533242 UBQLNLQ8IYU4 475 aa7.35□□□□□ -1.23
NEDD8-207ENST00000533242 CIARTQ8N365 385 aaPredicted RBP7.35□□□□□ -1.23
NEDD8-207ENST00000533242 OR52R1Q8NGF1 315 aa7.35□□□□□ -1.23
NEDD8-207ENST00000533242 OR6F1Q8NGZ6 308 aa7.35□□□□□ -1.23
NEDD8-207ENST00000533242 OR51A7Q8NH64 312 aa7.35□□□□□ -1.23
NEDD8-207ENST00000533242 PIGTQ969N2 578 aa7.35□□□□□ -1.23
NEDD8-207ENST00000533242 Q96MF0 132 aa7.35□□□□□ -1.23
NEDD8-207ENST00000533242 JSRP1Q96MG2 331 aaPredicted RBP7.35□□□□□ -1.23
NEDD8-207ENST00000533242 TRIB1Q96RU8 372 aa7.35□□□□□ -1.23
NEDD8-207ENST00000533242 ATF6BQ99941 703 aa7.35□□□□□ -1.23
NEDD8-207ENST00000533242 MED18Q9BUE0 208 aa7.35□□□□□ -1.23
NEDD8-207ENST00000533242 RBM24Q9BX46 236 aaKnown RBP7.35□□□□□ -1.23
NEDD8-207ENST00000533242 TTTY10Q9BZA0 68 aa7.35□□□□□ -1.23
NEDD8-207ENST00000533242 ZNF232Q9UNY5 417 aa7.35□□□□□ -1.23
NEDD8-207ENST00000533242 SIGLEC7Q9Y286 467 aa7.35□□□□□ -1.23
NEDD8-207ENST00000533242 SPACA6W5XKT8 324 aa7.35□□□□□ -1.23
NEDD8-207ENST00000533242 RAI1Q7Z5J4 1906 aaPredicted RBP7.35□□□□□ -1.23
NEDD8-207ENST00000533242 CHD3Q12873 2000 aaKnown RBP7.34□□□□□ -1.23
NEDD8-207ENST00000533242 TRDV1A0A1B0GX56 115 aa7.34□□□□□ -1.23
NEDD8-207ENST00000533242 CCDC182A6NF36 153 aa7.34□□□□□ -1.23
NEDD8-207ENST00000533242 LRRN3E7EW58 273 aa7.34□□□□□ -1.23
NEDD8-207ENST00000533242 IMPA2O14732 288 aa7.34□□□□□ -1.23
NEDD8-207ENST00000533242 GNB5O14775 395 aa7.34□□□□□ -1.23
NEDD8-207ENST00000533242 CASKO14936 926 aa7.34□□□□□ -1.23
NEDD8-207ENST00000533242 MAGEB4O15481 346 aaPredicted RBP7.34□□□□□ -1.23
NEDD8-207ENST00000533242 TMIGD3P0DMS9 266 aaPredicted RBP7.34□□□□□ -1.23
NEDD8-207ENST00000533242 BMP7P18075 431 aa7.34□□□□□ -1.23
NEDD8-207ENST00000533242 DEFA1P59665 94 aa7.34□□□□□ -1.23
NEDD8-207ENST00000533242 DEFA3P59666 94 aa7.34□□□□□ -1.23
NEDD8-207ENST00000533242 NTRK2Q16620 822 aa7.34□□□□□ -1.23
NEDD8-207ENST00000533242 ARMC4Q5T2S8 1044 aa7.34□□□□□ -1.23
NEDD8-207ENST00000533242 SSX6Q7RTT6 188 aa7.34□□□□□ -1.23
NEDD8-207ENST00000533242 ZNF614Q8N883 585 aa7.34□□□□□ -1.23
NEDD8-207ENST00000533242 DTX3Q8N9I9 347 aa7.34□□□□□ -1.23
NEDD8-207ENST00000533242 CDRT4Q8N9R6 151 aa7.34□□□□□ -1.23
NEDD8-207ENST00000533242 C17orf47Q8NEP4 570 aa7.34□□□□□ -1.23
NEDD8-207ENST00000533242 OR10G3Q8NGC4 313 aa7.34□□□□□ -1.23
NEDD8-207ENST00000533242 ZFP3Q96NJ6 502 aa7.34□□□□□ -1.23
NEDD8-207ENST00000533242 DGAT2Q96PD7 388 aa7.34□□□□□ -1.23
NEDD8-207ENST00000533242 ISYNA1Q9NPH2 558 aa7.34□□□□□ -1.23
NEDD8-207ENST00000533242 DUSP22Q9NRW4 184 aa7.34□□□□□ -1.23
NEDD8-207ENST00000533242 ALPK2Q86TB3 2170 aa7.34□□□□□ -1.23
NEDD8-207ENST00000533242 A0A087WV62 115 aa7.34□□□□□ -1.23
NEDD8-207ENST00000533242 INAFM1C9JVW0 142 aa7.34□□□□□ -1.23
NEDD8-207ENST00000533242 SMAD7O15105 426 aaKnown RBP7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms