RNA–Protein interactions for RNA: ENST00000531900.1

GPATCH4-216, Transcript of G-patch domain containing 4, humanhuman

TSL 2

Gene GPATCH4, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-216ENST00000531900 THTPAQ9BU02 230 aa9.4□□□□□ -0.9
GPATCH4-216ENST00000531900 BDH2Q9BUT1 245 aa9.4□□□□□ -0.9
GPATCH4-216ENST00000531900 TRAF4Q9BUZ4 470 aaPredicted RBP9.4□□□□□ -0.9
GPATCH4-216ENST00000531900 C1QTNF6Q9BXI9 259 aa9.4□□□□□ -0.9
GPATCH4-216ENST00000531900 CXorf56Q9H5V9 222 aa9.4□□□□□ -0.9
GPATCH4-216ENST00000531900 SIAEQ9HAT2 523 aa9.4□□□□□ -0.9
GPATCH4-216ENST00000531900 LYVE1Q9Y5Y7 322 aa9.4□□□□□ -0.9
GPATCH4-216ENST00000531900 NF1P21359 2839 aa9.4□□□□□ -0.91
GPATCH4-216ENST00000531900 NAV3Q8IVL0 2385 aa9.39□□□□□ -0.91
GPATCH4-216ENST00000531900 GSC2O15499 205 aa9.39□□□□□ -0.91
GPATCH4-216ENST00000531900 DNAJC8O75937 253 aaPredicted RBP9.39□□□□□ -0.91
GPATCH4-216ENST00000531900 ATP5HO75947 161 aa9.39□□□□□ -0.91
GPATCH4-216ENST00000531900 PDE5AO76074 875 aa9.39□□□□□ -0.91
GPATCH4-216ENST00000531900 UBL3O95164 117 aa9.39□□□□□ -0.91
GPATCH4-216ENST00000531900 NDUFB2O95178 105 aa9.39□□□□□ -0.91
GPATCH4-216ENST00000531900 CRYAAP02489 173 aa9.39□□□□□ -0.91
GPATCH4-216ENST00000531900 CECR9P0C854 216 aa9.39□□□□□ -0.91
GPATCH4-216ENST00000531900 RAP2AP10114 183 aa9.39□□□□□ -0.91
GPATCH4-216ENST00000531900 B4GALT1P15291 398 aa9.39□□□□□ -0.91
GPATCH4-216ENST00000531900 ZNF14P17017 642 aaPredicted RBP9.39□□□□□ -0.91
GPATCH4-216ENST00000531900 NPR2P20594 1047 aa9.39□□□□□ -0.91
GPATCH4-216ENST00000531900 RRM2P31350 389 aa9.39□□□□□ -0.91
GPATCH4-216ENST00000531900 APOBEC3AP31941 199 aaPredicted RBP9.39□□□□□ -0.91
GPATCH4-216ENST00000531900 IFNGR2P38484 337 aa9.39□□□□□ -0.91
GPATCH4-216ENST00000531900 GPR4P46093 362 aa9.39□□□□□ -0.91
GPATCH4-216ENST00000531900 GSSP48637 474 aa9.39□□□□□ -0.91
GPATCH4-216ENST00000531900 CDH11P55287 796 aa9.39□□□□□ -0.91
GPATCH4-216ENST00000531900 SPIBQ01892 262 aa9.39□□□□□ -0.91
GPATCH4-216ENST00000531900 CHRNB3Q05901 458 aa9.39□□□□□ -0.91
GPATCH4-216ENST00000531900 GSG1Q2KHT4 349 aa9.39□□□□□ -0.91
GPATCH4-216ENST00000531900 FAM98BQ52LJ0 330 aaKnown RBP9.39□□□□□ -0.91
GPATCH4-216ENST00000531900 FAM27BQ5VT28 67 aa9.39□□□□□ -0.91
GPATCH4-216ENST00000531900 GPR139Q6DWJ6 353 aa9.39□□□□□ -0.91
GPATCH4-216ENST00000531900 C11orf71Q6IPW1 123 aa9.39□□□□□ -0.91
GPATCH4-216ENST00000531900 ZNF770Q6IQ21 691 aaPredicted RBP9.39□□□□□ -0.91
GPATCH4-216ENST00000531900 SLC22A25Q6T423 547 aa9.39□□□□□ -0.91
GPATCH4-216ENST00000531900 CLEC9AQ6UXN8 241 aa9.39□□□□□ -0.91
GPATCH4-216ENST00000531900 B3GLCTQ6Y288 498 aa9.39□□□□□ -0.91
GPATCH4-216ENST00000531900 DPY19L2P2Q6ZN68 376 aa9.39□□□□□ -0.91
GPATCH4-216ENST00000531900 YTHDF3Q7Z739 585 aaKnown RBP9.39□□□□□ -0.91
GPATCH4-216ENST00000531900 SKA3Q8IX90 412 aa9.39□□□□□ -0.91
GPATCH4-216ENST00000531900 NUP37Q8NFH4 326 aa9.39□□□□□ -0.91
GPATCH4-216ENST00000531900 OR4F15Q8NGB8 312 aa9.39□□□□□ -0.91
GPATCH4-216ENST00000531900 OR4C15Q8NGM1 316 aa9.39□□□□□ -0.91
GPATCH4-216ENST00000531900 OR52J3Q8NH60 311 aa9.39□□□□□ -0.91
GPATCH4-216ENST00000531900 NANOS1Q8WY41 292 aaKnown RBP9.39□□□□□ -0.91
GPATCH4-216ENST00000531900 CLPTM1LQ96KA5 538 aa9.39□□□□□ -0.91
GPATCH4-216ENST00000531900 RBP7Q96R05 134 aa9.39□□□□□ -0.91
GPATCH4-216ENST00000531900 NDEL1Q9GZM8 345 aa9.39□□□□□ -0.91
GPATCH4-216ENST00000531900 TMCC3Q9ULS5 477 aa9.39□□□□□ -0.91
GPATCH4-216ENST00000531900 AURKCQ9UQB9 309 aa9.39□□□□□ -0.91
GPATCH4-216ENST00000531900 LAMP3Q9UQV4 416 aa9.39□□□□□ -0.91
GPATCH4-216ENST00000531900 UGT2A1Q9Y4X1 527 aa9.39□□□□□ -0.91
GPATCH4-216ENST00000531900 V9GYQ6 96 aa9.39□□□□□ -0.91
GPATCH4-216ENST00000531900 CSPG4Q6UVK1 2322 aa9.39□□□□□ -0.91
GPATCH4-216ENST00000531900 UNC119BA6NIH7 251 aa9.38□□□□□ -0.91
GPATCH4-216ENST00000531900 IMPA2O14732 288 aa9.38□□□□□ -0.91
GPATCH4-216ENST00000531900 ARPC3O15145 178 aa9.38□□□□□ -0.91
GPATCH4-216ENST00000531900 FARS2O95363 451 aaKnown RBP9.38□□□□□ -0.91
GPATCH4-216ENST00000531900 HLA-HP01893 362 aa9.38□□□□□ -0.91
GPATCH4-216ENST00000531900 MMP7P09237 267 aaPredicted RBP9.38□□□□□ -0.91
GPATCH4-216ENST00000531900 ZNF35P13682 527 aa9.38□□□□□ -0.91
GPATCH4-216ENST00000531900 HOXB4P17483 251 aaPredicted RBP9.38□□□□□ -0.91
GPATCH4-216ENST00000531900 SDHAP31040 664 aa9.38□□□□□ -0.91
GPATCH4-216ENST00000531900 ACVR1BP36896 505 aa9.38□□□□□ -0.91
GPATCH4-216ENST00000531900 RASSF2P50749 326 aa9.38□□□□□ -0.91
GPATCH4-216ENST00000531900 ZNF84P51523 738 aa9.38□□□□□ -0.91
GPATCH4-216ENST00000531900 RAB1AP62820 205 aa9.38□□□□□ -0.91
GPATCH4-216ENST00000531900 TUBA1BP68363 451 aa9.38□□□□□ -0.91
GPATCH4-216ENST00000531900 TUBA4AP68366 448 aa9.38□□□□□ -0.91
GPATCH4-216ENST00000531900 SPOCK1Q08629 439 aa9.38□□□□□ -0.91
GPATCH4-216ENST00000531900 TSPAN31Q12999 210 aa9.38□□□□□ -0.91
GPATCH4-216ENST00000531900 ETFDHQ16134 617 aa9.38□□□□□ -0.91
GPATCH4-216ENST00000531900 RFX4Q33E94 735 aa9.38□□□□□ -0.91
GPATCH4-216ENST00000531900 AGAP6Q5VW22 663 aa9.38□□□□□ -0.91
GPATCH4-216ENST00000531900 SMARCD3Q6STE5 483 aa9.38□□□□□ -0.91
GPATCH4-216ENST00000531900 THSD4Q6ZMP0 1018 aa9.38□□□□□ -0.91
GPATCH4-216ENST00000531900 TUBA1AQ71U36 451 aa9.38□□□□□ -0.91
GPATCH4-216ENST00000531900 MDP1Q86V88 176 aa9.38□□□□□ -0.91
GPATCH4-216ENST00000531900 MEX3DQ86XN8 651 aaKnown RBP9.38□□□□□ -0.91
GPATCH4-216ENST00000531900 ADGRG5Q8IZF4 528 aa9.38□□□□□ -0.91
GPATCH4-216ENST00000531900 SYT14Q8NB59 555 aa9.38□□□□□ -0.91
GPATCH4-216ENST00000531900 GTPBP3Q969Y2 492 aaKnown RBP9.38□□□□□ -0.91
GPATCH4-216ENST00000531900 NABP1Q96AH0 204 aa9.38□□□□□ -0.91
GPATCH4-216ENST00000531900 RSRC1Q96IZ7 334 aaKnown RBP9.38□□□□□ -0.91
GPATCH4-216ENST00000531900 Q96MF0 132 aa9.38□□□□□ -0.91
GPATCH4-216ENST00000531900 SNX18Q96RF0 628 aa9.38□□□□□ -0.91
GPATCH4-216ENST00000531900 WACQ9BTA9 647 aa9.38□□□□□ -0.91
GPATCH4-216ENST00000531900 CADM1Q9BY67 442 aaKnown RBP9.38□□□□□ -0.91
GPATCH4-216ENST00000531900 MMADHCQ9H3L0 296 aaPredicted RBP9.38□□□□□ -0.91
GPATCH4-216ENST00000531900 ZNF442Q9H7R0 627 aa9.38□□□□□ -0.91
GPATCH4-216ENST00000531900 CBLN4Q9NTU7 201 aa9.38□□□□□ -0.91
GPATCH4-216ENST00000531900 GRHPRQ9UBQ7 328 aa9.38□□□□□ -0.91
GPATCH4-216ENST00000531900 POMPQ9Y244 141 aa9.38□□□□□ -0.91
GPATCH4-216ENST00000531900 NSD1Q96L73 2696 aaPredicted RBP9.38□□□□□ -0.91
GPATCH4-216ENST00000531900 CHD3Q12873 2000 aaKnown RBP9.38□□□□□ -0.91
GPATCH4-216ENST00000531900 IGKV1D-43A0A0B4J1Z2 117 aa9.37□□□□□ -0.91
GPATCH4-216ENST00000531900 IGHV2OR16-5A0A0B4J2B6 119 aa9.37□□□□□ -0.91
GPATCH4-216ENST00000531900 TCRBV3S1A0A5B6 114 aa9.37□□□□□ -0.91
GPATCH4-216ENST00000531900 SLC22A23A1A5C7 686 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms