RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 IGHV4-39P01824 125 aa7.35□□□□□ -1.23
SSBP3-212ENST00000528930 SOD3P08294 240 aa7.35□□□□□ -1.23
SSBP3-212ENST00000528930 ASAH2BP0C7U1 165 aa7.35□□□□□ -1.23
SSBP3-212ENST00000528930 CDH2P19022 906 aaPredicted RBP7.35□□□□□ -1.23
SSBP3-212ENST00000528930 FUT4P22083 530 aa7.35□□□□□ -1.23
SSBP3-212ENST00000528930 PTAFRP25105 342 aa7.35□□□□□ -1.23
SSBP3-212ENST00000528930 CD40P25942 277 aa7.35□□□□□ -1.23
SSBP3-212ENST00000528930 GSK3BP49841 420 aa7.35□□□□□ -1.23
SSBP3-212ENST00000528930 NUDT2P50583 147 aa7.35□□□□□ -1.23
SSBP3-212ENST00000528930 ZNF83P51522 516 aa7.35□□□□□ -1.23
SSBP3-212ENST00000528930 UGT2B15P54855 530 aa7.35□□□□□ -1.23
SSBP3-212ENST00000528930 PSME3P61289 254 aa7.35□□□□□ -1.23
SSBP3-212ENST00000528930 RPS4XP62701 263 aaKnown RBP7.35□□□□□ -1.23
SSBP3-212ENST00000528930 TGFBR3Q03167 851 aa7.35□□□□□ -1.23
SSBP3-212ENST00000528930 PUDPQ08623 228 aa7.35□□□□□ -1.23
SSBP3-212ENST00000528930 SPOCK1Q08629 439 aa7.35□□□□□ -1.23
SSBP3-212ENST00000528930 ZP4Q12836 540 aa7.35□□□□□ -1.23
SSBP3-212ENST00000528930 PMS2P3Q13401 168 aa7.35□□□□□ -1.23
SSBP3-212ENST00000528930 C1DQ13901 141 aaKnown RBP7.35□□□□□ -1.23
SSBP3-212ENST00000528930 PGGHGQ32M88 737 aa7.35□□□□□ -1.23
SSBP3-212ENST00000528930 HIKESHIQ53FT3 197 aa7.35□□□□□ -1.23
SSBP3-212ENST00000528930 C1QTNF12Q5T7M4 302 aa7.35□□□□□ -1.23
SSBP3-212ENST00000528930 SLC46A3Q7Z3Q1 461 aa7.35□□□□□ -1.23
SSBP3-212ENST00000528930 ABHD12BQ7Z5M8 362 aaPredicted RBP7.35□□□□□ -1.23
SSBP3-212ENST00000528930 PXKQ7Z7A4 578 aa7.35□□□□□ -1.23
SSBP3-212ENST00000528930 UEVLDQ8IX04 471 aa7.35□□□□□ -1.23
SSBP3-212ENST00000528930 OR1K1Q8NGR3 316 aa7.35□□□□□ -1.23
SSBP3-212ENST00000528930 FAM216AQ8WUB2 273 aa7.35□□□□□ -1.23
SSBP3-212ENST00000528930 FBXW5Q969U6 566 aa7.35□□□□□ -1.23
SSBP3-212ENST00000528930 DGCR14Q96DF8 476 aaKnown RBP7.35□□□□□ -1.23
SSBP3-212ENST00000528930 CMTM5Q96DZ9 223 aa7.35□□□□□ -1.23
SSBP3-212ENST00000528930 TRMT61AQ96FX7 289 aaKnown RBP7.35□□□□□ -1.23
SSBP3-212ENST00000528930 OR2M2Q96R28 347 aa7.35□□□□□ -1.23
SSBP3-212ENST00000528930 EMC6Q9BV81 110 aa7.35□□□□□ -1.23
SSBP3-212ENST00000528930 C1QTNF6Q9BXI9 259 aa7.35□□□□□ -1.23
SSBP3-212ENST00000528930 ASPNQ9BXN1 380 aa7.35□□□□□ -1.23
SSBP3-212ENST00000528930 SLC19A3Q9BZV2 496 aa7.35□□□□□ -1.23
SSBP3-212ENST00000528930 POLR2J2Q9GZM3 115 aaKnown RBP7.35□□□□□ -1.23
SSBP3-212ENST00000528930 POLR2J3Q9H1A7 115 aaKnown RBP7.35□□□□□ -1.23
SSBP3-212ENST00000528930 C1orf21Q9H246 121 aa7.35□□□□□ -1.23
SSBP3-212ENST00000528930 GPR35Q9HC97 309 aa7.35□□□□□ -1.23
SSBP3-212ENST00000528930 MED29Q9NX70 200 aa7.35□□□□□ -1.23
SSBP3-212ENST00000528930 CISD1Q9NZ45 108 aaKnown RBP7.35□□□□□ -1.23
SSBP3-212ENST00000528930 ABCD2Q9UBJ2 740 aa7.35□□□□□ -1.23
SSBP3-212ENST00000528930 RIMS3Q9UJD0 308 aa7.35□□□□□ -1.23
SSBP3-212ENST00000528930 A4GNTQ9UNA3 340 aa7.35□□□□□ -1.23
SSBP3-212ENST00000528930 LAMP3Q9UQV4 416 aa7.35□□□□□ -1.23
SSBP3-212ENST00000528930 AMDHD2Q9Y303 409 aa7.35□□□□□ -1.23
SSBP3-212ENST00000528930 PCDHGB1Q9Y5G3 927 aa7.35□□□□□ -1.23
SSBP3-212ENST00000528930 NOX1Q9Y5S8 564 aa7.35□□□□□ -1.23
SSBP3-212ENST00000528930 SNX13Q9Y5W8 968 aa7.35□□□□□ -1.23
SSBP3-212ENST00000528930 PCLOQ9Y6V0 5065 aa7.35□□□□□ -1.23
SSBP3-212ENST00000528930 ARPC4-TTLL3A0A0A6YYG9 625 aa7.34□□□□□ -1.23
SSBP3-212ENST00000528930 E7EQL1 145 aa7.34□□□□□ -1.23
SSBP3-212ENST00000528930 M0R1B8 84 aa7.34□□□□□ -1.23
SSBP3-212ENST00000528930 CXCR6O00574 342 aa7.34□□□□□ -1.23
SSBP3-212ENST00000528930 KPNA4O00629 521 aaPredicted RBP7.34□□□□□ -1.23
SSBP3-212ENST00000528930 SLC43A1O75387 559 aa7.34□□□□□ -1.23
SSBP3-212ENST00000528930 KRT33AO76009 404 aa7.34□□□□□ -1.23
SSBP3-212ENST00000528930 IGF2P01344 180 aa7.34□□□□□ -1.23
SSBP3-212ENST00000528930 CD8AP01732 235 aa7.34□□□□□ -1.23
SSBP3-212ENST00000528930 MT-ND1P03886 318 aa7.34□□□□□ -1.23
SSBP3-212ENST00000528930 LYNP07948 512 aa7.34□□□□□ -1.23
SSBP3-212ENST00000528930 ADORA3P0DMS8 318 aa7.34□□□□□ -1.23
SSBP3-212ENST00000528930 ADMP35318 185 aa7.34□□□□□ -1.23
SSBP3-212ENST00000528930 RBM34P42696 430 aaKnown RBP7.34□□□□□ -1.23
SSBP3-212ENST00000528930 TAS2R41P59536 307 aa7.34□□□□□ -1.23
SSBP3-212ENST00000528930 PRPS1P60891 318 aa7.34□□□□□ -1.23
SSBP3-212ENST00000528930 ARF1P84077 181 aaKnown RBP7.34□□□□□ -1.23
SSBP3-212ENST00000528930 POU3F1Q03052 451 aaPredicted RBP7.34□□□□□ -1.23
SSBP3-212ENST00000528930 CEACAM16Q2WEN9 425 aa7.34□□□□□ -1.23
SSBP3-212ENST00000528930 TBRG1Q3YBR2 411 aa7.34□□□□□ -1.23
SSBP3-212ENST00000528930 FAM166AQ6J272 317 aa7.34□□□□□ -1.23
SSBP3-212ENST00000528930 KLHL17Q6TDP4 642 aa7.34□□□□□ -1.23
SSBP3-212ENST00000528930 TMEM108Q6UXF1 575 aa7.34□□□□□ -1.23
SSBP3-212ENST00000528930 DEF8Q6ZN54 512 aa7.34□□□□□ -1.23
SSBP3-212ENST00000528930 TSEN54Q7Z6J9 526 aaKnown RBP7.34□□□□□ -1.23
SSBP3-212ENST00000528930 VTCN1Q7Z7D3 282 aa7.34□□□□□ -1.23
SSBP3-212ENST00000528930 C20orf196Q8IYI0 205 aa7.34□□□□□ -1.23
SSBP3-212ENST00000528930 C10orf53Q8N6V4 93 aa7.34□□□□□ -1.23
SSBP3-212ENST00000528930 PIK3C3Q8NEB9 887 aa7.34□□□□□ -1.23
SSBP3-212ENST00000528930 OR10H5Q8NGA6 315 aa7.34□□□□□ -1.23
SSBP3-212ENST00000528930 PFN4Q8NHR9 129 aa7.34□□□□□ -1.23
SSBP3-212ENST00000528930 MAGEE2Q8TD90 523 aaPredicted RBP7.34□□□□□ -1.23
SSBP3-212ENST00000528930 SMAP2Q8WU79 429 aaPredicted RBP7.34□□□□□ -1.23
SSBP3-212ENST00000528930 TMEM255BQ8WV15 326 aa7.34□□□□□ -1.23
SSBP3-212ENST00000528930 TPD52L3Q96J77 140 aa7.34□□□□□ -1.23
SSBP3-212ENST00000528930 RADILQ96JH8 1075 aa7.34□□□□□ -1.23
SSBP3-212ENST00000528930 LRR1Q96L50 414 aa7.34□□□□□ -1.23
SSBP3-212ENST00000528930 CHODLQ9H9P2 273 aa7.34□□□□□ -1.23
SSBP3-212ENST00000528930 FKRPQ9H9S5 495 aa7.34□□□□□ -1.23
SSBP3-212ENST00000528930 NANSQ9NR45 359 aa7.34□□□□□ -1.23
SSBP3-212ENST00000528930 C20orf141Q9NUB4 165 aa7.34□□□□□ -1.23
SSBP3-212ENST00000528930 PTTG2Q9NZH5 202 aa7.34□□□□□ -1.23
SSBP3-212ENST00000528930 ZNF229Q9UJW7 825 aa7.34□□□□□ -1.23
SSBP3-212ENST00000528930 MGAT4BQ9UQ53 548 aa7.34□□□□□ -1.23
SSBP3-212ENST00000528930 MAGED1Q9Y5V3 778 aaPredicted RBP7.34□□□□□ -1.23
SSBP3-212ENST00000528930 HEATR1Q9H583 2144 aaKnown RBP7.33□□□□□ -1.24
SSBP3-212ENST00000528930 A0A096LPE4 126 aa7.33□□□□□ -1.24
SSBP3-212ENST00000528930 IGHV1-18A0A0C4DH31 117 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms