RNA–Protein interactions for RNA: ENST00000528232.5

CTNND1-218, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-218ENST00000528232 SERTAD4Q9NUC0 356 aa6.64□□□□□ -1.35
CTNND1-218ENST00000528232 PTRH2Q9Y3E5 179 aaKnown RBP6.64□□□□□ -1.35
CTNND1-218ENST00000528232 TRAV36DV7A0A075B6V5 113 aa6.64□□□□□ -1.35
CTNND1-218ENST00000528232 A0A1B0GWA3 101 aa6.64□□□□□ -1.35
CTNND1-218ENST00000528232 TMEM212A6NML5 194 aa6.64□□□□□ -1.35
CTNND1-218ENST00000528232 FAM227AF5H4B4 570 aa6.64□□□□□ -1.35
CTNND1-218ENST00000528232 IGHG1P01857 330 aa6.64□□□□□ -1.35
CTNND1-218ENST00000528232 APOA2P02652 100 aa6.64□□□□□ -1.35
CTNND1-218ENST00000528232 TRHRP34981 398 aaPredicted RBP6.64□□□□□ -1.35
CTNND1-218ENST00000528232 RACK1P63244 317 aaKnown RBP6.64□□□□□ -1.35
CTNND1-218ENST00000528232 FOXO1Q12778 655 aa6.64□□□□□ -1.35
CTNND1-218ENST00000528232 ZNF750Q32MQ0 723 aa6.64□□□□□ -1.35
CTNND1-218ENST00000528232 OPN5Q6U736 354 aa6.64□□□□□ -1.35
CTNND1-218ENST00000528232 TMPPEQ6ZT21 453 aa6.64□□□□□ -1.35
CTNND1-218ENST00000528232 SLC35D2Q76EJ3 337 aa6.64□□□□□ -1.35
CTNND1-218ENST00000528232 BAGE3Q86Y29 109 aa6.64□□□□□ -1.35
CTNND1-218ENST00000528232 BAGE2Q86Y30 109 aa6.64□□□□□ -1.35
CTNND1-218ENST00000528232 KIAA1958Q8N8K9 716 aa6.64□□□□□ -1.35
CTNND1-218ENST00000528232 OR13H1Q8NG92 308 aa6.64□□□□□ -1.35
CTNND1-218ENST00000528232 NUDT8Q8WV74 236 aa6.64□□□□□ -1.35
CTNND1-218ENST00000528232 RBM14Q96PK6 669 aaKnown RBP6.64□□□□□ -1.35
CTNND1-218ENST00000528232 TNFRSF13CQ96RJ3 184 aa6.64□□□□□ -1.35
CTNND1-218ENST00000528232 OCEL1Q9H607 264 aa6.64□□□□□ -1.35
CTNND1-218ENST00000528232 PPIL1Q9Y3C6 166 aa6.64□□□□□ -1.35
CTNND1-218ENST00000528232 SLC22A7Q9Y694 548 aa6.64□□□□□ -1.35
CTNND1-218ENST00000528232 SLCO1B1Q9Y6L6 691 aa6.64□□□□□ -1.35
CTNND1-218ENST00000528232 COL4A5P29400 1685 aa6.64□□□□□ -1.35
CTNND1-218ENST00000528232 CTDSP2O14595 271 aa6.64□□□□□ -1.35
CTNND1-218ENST00000528232 CCKARP32238 428 aa6.64□□□□□ -1.35
CTNND1-218ENST00000528232 PXNP49023 591 aaPredicted RBP6.64□□□□□ -1.35
CTNND1-218ENST00000528232 MELKQ14680 651 aa6.64□□□□□ -1.35
CTNND1-218ENST00000528232 P2RY14Q15391 338 aa6.64□□□□□ -1.35
CTNND1-218ENST00000528232 TAF9Q16594 264 aa6.64□□□□□ -1.35
CTNND1-218ENST00000528232 TMEM183BQ1AE95 376 aa6.64□□□□□ -1.35
CTNND1-218ENST00000528232 ABHD17BQ5VST6 288 aa6.64□□□□□ -1.35
CTNND1-218ENST00000528232 IL17RCQ8NAC3 791 aa6.64□□□□□ -1.35
CTNND1-218ENST00000528232 C2CD4CQ8TF44 421 aa6.64□□□□□ -1.35
CTNND1-218ENST00000528232 RBM24Q9BX46 236 aaKnown RBP6.64□□□□□ -1.35
CTNND1-218ENST00000528232 MED20Q9H944 212 aa6.64□□□□□ -1.35
CTNND1-218ENST00000528232 SEMA4GQ9NTN9 838 aa6.64□□□□□ -1.35
CTNND1-218ENST00000528232 PUS1Q9Y606 427 aaKnown RBP eCLIP6.64□□□□□ -1.35
CTNND1-218ENST00000528232 GREB1LQ9C091 1923 aaPredicted RBP6.64□□□□□ -1.35
CTNND1-218ENST00000528232 TRDV1A0A1B0GX56 115 aa6.64□□□□□ -1.35
CTNND1-218ENST00000528232 OR5K3A6NET4 321 aa6.64□□□□□ -1.35
CTNND1-218ENST00000528232 HCRTR1O43613 425 aa6.64□□□□□ -1.35
CTNND1-218ENST00000528232 PLRG1O43660 514 aaKnown RBP6.64□□□□□ -1.35
CTNND1-218ENST00000528232 MMP11P24347 488 aa6.64□□□□□ -1.35
CTNND1-218ENST00000528232 OR1D4P47884 311 aa6.64□□□□□ -1.35
CTNND1-218ENST00000528232 CCR9P51686 369 aa6.64□□□□□ -1.35
CTNND1-218ENST00000528232 HNRNPA3P51991 378 aaKnown RBP6.64□□□□□ -1.35
CTNND1-218ENST00000528232 IL13RA1P78552 427 aa6.64□□□□□ -1.35
CTNND1-218ENST00000528232 ZNF239Q16600 458 aaKnown RBP6.64□□□□□ -1.35
CTNND1-218ENST00000528232 GDPD3Q7L5L3 318 aa6.64□□□□□ -1.35
CTNND1-218ENST00000528232 SYT13Q7L8C5 426 aa6.64□□□□□ -1.35
CTNND1-218ENST00000528232 GLB1L2Q8IW92 636 aa6.64□□□□□ -1.35
CTNND1-218ENST00000528232 CMTM1Q8IZ96 169 aa6.64□□□□□ -1.35
CTNND1-218ENST00000528232 ZNF610Q8N9Z0 462 aa6.64□□□□□ -1.35
CTNND1-218ENST00000528232 RCBTB1Q8NDN9 531 aa6.64□□□□□ -1.35
CTNND1-218ENST00000528232 ZNF439Q8NDP4 499 aa6.64□□□□□ -1.35
CTNND1-218ENST00000528232 OR1S1Q8NH92 325 aa6.64□□□□□ -1.35
CTNND1-218ENST00000528232 SORCS2Q96PQ0 1159 aa6.64□□□□□ -1.35
CTNND1-218ENST00000528232 OR10A2Q9H208 303 aa6.64□□□□□ -1.35
CTNND1-218ENST00000528232 PLAC1Q9HBJ0 212 aa6.64□□□□□ -1.35
CTNND1-218ENST00000528232 NRIP3Q9NQ35 241 aa6.64□□□□□ -1.35
CTNND1-218ENST00000528232 KLHL13Q9P2N7 655 aa6.64□□□□□ -1.35
CTNND1-218ENST00000528232 ETV7Q9Y603 341 aa6.64□□□□□ -1.35
CTNND1-218ENST00000528232 FAM166BA8MTA8 275 aa6.63□□□□□ -1.35
CTNND1-218ENST00000528232 NCR1O76036 304 aa6.63□□□□□ -1.35
CTNND1-218ENST00000528232 IGHEP01854 428 aa6.63□□□□□ -1.35
CTNND1-218ENST00000528232 C1QAP02745 245 aa6.63□□□□□ -1.35
CTNND1-218ENST00000528232 TMEM225BP0DP42 221 aa6.63□□□□□ -1.35
CTNND1-218ENST00000528232 TACR3P29371 465 aa6.63□□□□□ -1.35
CTNND1-218ENST00000528232 EPHA4P54764 986 aa6.63□□□□□ -1.35
CTNND1-218ENST00000528232 SRPXP78539 464 aa6.63□□□□□ -1.35
CTNND1-218ENST00000528232 LTBQ06643 244 aa6.63□□□□□ -1.35
CTNND1-218ENST00000528232 C21orf62-AS1Q17RA5 79 aa6.63□□□□□ -1.35
CTNND1-218ENST00000528232 CTU2Q2VPK5 515 aaKnown RBP6.63□□□□□ -1.35
CTNND1-218ENST00000528232 ACOT6Q3I5F7 207 aaPredicted RBP6.63□□□□□ -1.35
CTNND1-218ENST00000528232 NANOGP1Q8N7R0 232 aa6.63□□□□□ -1.35
CTNND1-218ENST00000528232 WFIKKN1Q96NZ8 548 aa6.63□□□□□ -1.35
CTNND1-218ENST00000528232 OR5M11Q96RB7 305 aa6.63□□□□□ -1.35
CTNND1-218ENST00000528232 TRAF4Q9BUZ4 470 aaPredicted RBP6.63□□□□□ -1.35
CTNND1-218ENST00000528232 KATNB1Q9BVA0 655 aa6.63□□□□□ -1.35
CTNND1-218ENST00000528232 NMNAT2Q9BZQ4 307 aa6.63□□□□□ -1.35
CTNND1-218ENST00000528232 ELOVL3Q9HB03 270 aa6.63□□□□□ -1.35
CTNND1-218ENST00000528232 FGF22Q9HCT0 170 aa6.63□□□□□ -1.35
CTNND1-218ENST00000528232 C19orf53Q9UNZ5 99 aaPredicted RBP6.63□□□□□ -1.35
CTNND1-218ENST00000528232 YTHDF2Q9Y5A9 579 aaKnown RBP6.63□□□□□ -1.35
CTNND1-218ENST00000528232 A0A087X0M5 115 aa6.63□□□□□ -1.35
CTNND1-218ENST00000528232 A0A1B0GX30 115 aa6.63□□□□□ -1.35
CTNND1-218ENST00000528232 AP4M1O00189 453 aa6.63□□□□□ -1.35
CTNND1-218ENST00000528232 CIDEAO60543 219 aa6.63□□□□□ -1.35
CTNND1-218ENST00000528232 CD27P26842 260 aa6.63□□□□□ -1.35
CTNND1-218ENST00000528232 BSGP35613 385 aa6.63□□□□□ -1.35
CTNND1-218ENST00000528232 CCR2P41597 374 aa6.63□□□□□ -1.35
CTNND1-218ENST00000528232 VASPP50552 380 aaPredicted RBP6.63□□□□□ -1.35
CTNND1-218ENST00000528232 ERVK-16P61578 105 aa6.63□□□□□ -1.35
CTNND1-218ENST00000528232 HIST1H3AP68431 136 aa6.63□□□□□ -1.35
CTNND1-218ENST00000528232 SIRPAP78324 504 aa6.63□□□□□ -1.35
CTNND1-218ENST00000528232 CDK5Q00535 292 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms