RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 NT5CQ8TCD5 201 aa13.3□□□□□ -0.28
CAPN1-214ENST00000528165 SMARCD2Q92925 531 aa13.3□□□□□ -0.28
CAPN1-214ENST00000528165 MCHR2Q969V1 340 aa13.3□□□□□ -0.28
CAPN1-214ENST00000528165 LMF1Q96S06 567 aa13.3□□□□□ -0.28
CAPN1-214ENST00000528165 SEC11CQ9BY50 192 aa13.3□□□□□ -0.28
CAPN1-214ENST00000528165 ZBP1Q9H171 429 aa13.3□□□□□ -0.28
CAPN1-214ENST00000528165 TMEM74BQ9NUR3 256 aa13.3□□□□□ -0.28
CAPN1-214ENST00000528165 TRPM6Q9BX84 2022 aa13.3□□□□□ -0.28
CAPN1-214ENST00000528165 BLOC1S5-TXNDC5H3BN57 136 aa13.3□□□□□ -0.28
CAPN1-214ENST00000528165 ALOX12BO75342 701 aa13.3□□□□□ -0.28
CAPN1-214ENST00000528165 S100A9P06702 114 aaKnown RBP13.3□□□□□ -0.28
CAPN1-214ENST00000528165 FABP1P07148 127 aa13.3□□□□□ -0.28
CAPN1-214ENST00000528165 RHOP08100 348 aa13.3□□□□□ -0.28
CAPN1-214ENST00000528165 ACAA1P09110 424 aaPredicted RBP13.3□□□□□ -0.28
CAPN1-214ENST00000528165 ZNF806P0C7X5 589 aa13.3□□□□□ -0.28
CAPN1-214ENST00000528165 TPT1P13693 172 aaKnown RBP13.3□□□□□ -0.28
CAPN1-214ENST00000528165 PNLIPRP2P54317 469 aa13.3□□□□□ -0.28
CAPN1-214ENST00000528165 RASGEF1BQ0VAM2 473 aa13.3□□□□□ -0.28
CAPN1-214ENST00000528165 FAM209BQ5JX69 171 aa13.3□□□□□ -0.28
CAPN1-214ENST00000528165 OR5AP2Q8NGF4 316 aa13.3□□□□□ -0.28
CAPN1-214ENST00000528165 RNF141Q8WVD5 230 aa13.3□□□□□ -0.28
CAPN1-214ENST00000528165 RAB7BQ96AH8 199 aa13.3□□□□□ -0.28
CAPN1-214ENST00000528165 TIMM29Q9BSF4 260 aa13.3□□□□□ -0.28
CAPN1-214ENST00000528165 TMEM231Q9H6L2 316 aa13.3□□□□□ -0.28
CAPN1-214ENST00000528165 SRA1Q9HD15 236 aaKnown RBP13.3□□□□□ -0.28
CAPN1-214ENST00000528165 SLC27A6Q9Y2P4 619 aa13.3□□□□□ -0.28
CAPN1-214ENST00000528165 MEX3AA1L020 520 aaKnown RBP13.29□□□□□ -0.28
CAPN1-214ENST00000528165 TVP23AA6NH52 213 aa13.29□□□□□ -0.28
CAPN1-214ENST00000528165 SLC17A2O00624 439 aa13.29□□□□□ -0.28
CAPN1-214ENST00000528165 P2RX6O15547 441 aa13.29□□□□□ -0.28
CAPN1-214ENST00000528165 CXCL14O95715 111 aa13.29□□□□□ -0.28
CAPN1-214ENST00000528165 CSN2P05814 226 aa13.29□□□□□ -0.28
CAPN1-214ENST00000528165 DCNP07585 359 aaKnown RBP13.29□□□□□ -0.28
CAPN1-214ENST00000528165 CFPP27918 469 aa13.29□□□□□ -0.28
CAPN1-214ENST00000528165 CCKBRP32239 447 aa13.29□□□□□ -0.28
CAPN1-214ENST00000528165 MAP3K8P41279 467 aa13.29□□□□□ -0.28
CAPN1-214ENST00000528165 CDC20BQ86Y33 519 aa13.29□□□□□ -0.28
CAPN1-214ENST00000528165 SKA3Q8IX90 412 aa13.29□□□□□ -0.28
CAPN1-214ENST00000528165 OR6N2Q8NGY6 317 aa13.29□□□□□ -0.28
CAPN1-214ENST00000528165 PIK3IP1Q96FE7 263 aa13.29□□□□□ -0.28
CAPN1-214ENST00000528165 EDEM2Q9BV94 578 aa13.29□□□□□ -0.28
CAPN1-214ENST00000528165 SLC22A11Q9NSA0 550 aa13.29□□□□□ -0.28
CAPN1-214ENST00000528165 SCAMP1O15126 338 aa13.29□□□□□ -0.28
CAPN1-214ENST00000528165 RDH16O75452 317 aa13.29□□□□□ -0.28
CAPN1-214ENST00000528165 FGF19O95750 216 aa13.29□□□□□ -0.28
CAPN1-214ENST00000528165 HEXAP06865 529 aa13.29□□□□□ -0.28
CAPN1-214ENST00000528165 CT62P0C5K7 136 aa13.29□□□□□ -0.28
CAPN1-214ENST00000528165 SLC25A1P53007 311 aa13.29□□□□□ -0.28
CAPN1-214ENST00000528165 RAB5BP61020 215 aa13.29□□□□□ -0.28
CAPN1-214ENST00000528165 OR7A5Q15622 319 aa13.29□□□□□ -0.28
CAPN1-214ENST00000528165 PRICKLE4Q2TBC4 344 aa13.29□□□□□ -0.28
CAPN1-214ENST00000528165 TMEFF1Q8IYR6 380 aa13.29□□□□□ -0.28
CAPN1-214ENST00000528165 SLCO5A1Q9H2Y9 848 aa13.29□□□□□ -0.28
CAPN1-214ENST00000528165 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.29□□□□□ -0.28
CAPN1-214ENST00000528165 UQCC1Q9NVA1 299 aa13.29□□□□□ -0.28
CAPN1-214ENST00000528165 A0A087WUJ7 227 aa13.28□□□□□ -0.28
CAPN1-214ENST00000528165 URADA6NGE7 173 aa13.28□□□□□ -0.28
CAPN1-214ENST00000528165 GRXCR1A8MXD5 290 aa13.28□□□□□ -0.28
CAPN1-214ENST00000528165 ZNF208O43345 1280 aa13.28□□□□□ -0.28
CAPN1-214ENST00000528165 ADH1CP00326 375 aa13.28□□□□□ -0.28
CAPN1-214ENST00000528165 CD79AP11912 226 aa13.28□□□□□ -0.28
CAPN1-214ENST00000528165 ABOP16442 354 aa13.28□□□□□ -0.28
CAPN1-214ENST00000528165 ZNF28P17035 718 aa13.28□□□□□ -0.28
CAPN1-214ENST00000528165 ZNF10P21506 573 aaPredicted RBP13.28□□□□□ -0.28
CAPN1-214ENST00000528165 PTGFRP43088 359 aa13.28□□□□□ -0.28
CAPN1-214ENST00000528165 AIMP2Q13155 320 aaKnown RBP13.28□□□□□ -0.28
CAPN1-214ENST00000528165 TOMM20Q15388 145 aa13.28□□□□□ -0.28
CAPN1-214ENST00000528165 SMAD2Q15796 467 aaKnown RBP13.28□□□□□ -0.28
CAPN1-214ENST00000528165 LYG2Q86SG7 212 aa13.28□□□□□ -0.28
CAPN1-214ENST00000528165 PRSS35Q8N3Z0 413 aa13.28□□□□□ -0.28
CAPN1-214ENST00000528165 STOML3Q8TAV4 291 aa13.28□□□□□ -0.28
CAPN1-214ENST00000528165 LCN9Q8WX39 176 aa13.28□□□□□ -0.28
CAPN1-214ENST00000528165 THRSPQ92748 146 aa13.28□□□□□ -0.28
CAPN1-214ENST00000528165 NKX3-1Q99801 234 aaPredicted RBP13.28□□□□□ -0.28
CAPN1-214ENST00000528165 HDAC8Q9BY41 377 aa13.28□□□□□ -0.28
CAPN1-214ENST00000528165 PHPT1Q9NRX4 125 aaPredicted RBP13.28□□□□□ -0.28
CAPN1-214ENST00000528165 MSRAQ9UJ68 235 aa13.28□□□□□ -0.28
CAPN1-214ENST00000528165 TRAV20A0A0B4J274 112 aa13.28□□□□□ -0.28
CAPN1-214ENST00000528165 NKX2-2O95096 273 aa13.28□□□□□ -0.28
CAPN1-214ENST00000528165 ZNF735P0CB33 412 aa13.28□□□□□ -0.28
CAPN1-214ENST00000528165 SMIM6P0DI80 62 aa13.28□□□□□ -0.28
CAPN1-214ENST00000528165 PPM1AP35813 382 aa13.28□□□□□ -0.28
CAPN1-214ENST00000528165 AQP2P41181 271 aa13.28□□□□□ -0.28
CAPN1-214ENST00000528165 RPS4XP62701 263 aaKnown RBP13.28□□□□□ -0.28
CAPN1-214ENST00000528165 RNF44Q7L0R7 432 aa13.28□□□□□ -0.28
CAPN1-214ENST00000528165 C10orf53Q8N6V4 93 aa13.28□□□□□ -0.28
CAPN1-214ENST00000528165 ZSCAN1Q8NBB4 408 aa13.28□□□□□ -0.28
CAPN1-214ENST00000528165 OR13C8Q8NGS7 320 aa13.28□□□□□ -0.28
CAPN1-214ENST00000528165 OR6S1Q8NH40 331 aa13.28□□□□□ -0.28
CAPN1-214ENST00000528165 PHB2Q99623 299 aa13.28□□□□□ -0.28
CAPN1-214ENST00000528165 SLC6A7Q99884 636 aa13.28□□□□□ -0.28
CAPN1-214ENST00000528165 ZDHHC4Q9NPG8 344 aa13.28□□□□□ -0.28
CAPN1-214ENST00000528165 MMP26Q9NRE1 261 aa13.28□□□□□ -0.28
CAPN1-214ENST00000528165 SPACA6W5XKT8 324 aa13.28□□□□□ -0.28
CAPN1-214ENST00000528165 TBC1D3IA0A087WXS9 549 aa13.27□□□□□ -0.28
CAPN1-214ENST00000528165 ZNF705EA8MWA4 302 aaPredicted RBP13.27□□□□□ -0.28
CAPN1-214ENST00000528165 KCNAB3O43448 404 aa13.27□□□□□ -0.28
CAPN1-214ENST00000528165 FGF18O76093 207 aa13.27□□□□□ -0.28
CAPN1-214ENST00000528165 GPR75O95800 540 aa13.27□□□□□ -0.28
CAPN1-214ENST00000528165 PGAM2P15259 253 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms