RNA–Protein interactions for RNA: ENST00000528001.1

CNKSR1-211, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 4

Gene CNKSR1, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-211ENST00000528001 CD47Q08722 323 aa11.41□□□□□ -0.58
CNKSR1-211ENST00000528001 TOP3AQ13472 1001 aaPredicted RBP11.41□□□□□ -0.58
CNKSR1-211ENST00000528001 ZNF704Q6ZNC4 412 aaPredicted RBP11.41□□□□□ -0.58
CNKSR1-211ENST00000528001 C20orf204Q6ZNR8 217 aa11.41□□□□□ -0.58
CNKSR1-211ENST00000528001 HIPK1Q86Z02 1210 aa11.41□□□□□ -0.58
CNKSR1-211ENST00000528001 LNX2Q8N448 690 aa11.41□□□□□ -0.58
CNKSR1-211ENST00000528001 SYT14Q8NB59 555 aa11.41□□□□□ -0.58
CNKSR1-211ENST00000528001 OR5K1Q8NHB7 308 aa11.41□□□□□ -0.58
CNKSR1-211ENST00000528001 Q96M85 177 aa11.41□□□□□ -0.58
CNKSR1-211ENST00000528001 FEVQ99581 238 aa11.41□□□□□ -0.58
CNKSR1-211ENST00000528001 ZNF556Q9HAH1 456 aa11.41□□□□□ -0.58
CNKSR1-211ENST00000528001 NTN4Q9HB63 628 aa11.41□□□□□ -0.58
CNKSR1-211ENST00000528001 PDP1Q9P0J1 537 aaPredicted RBP11.41□□□□□ -0.58
CNKSR1-211ENST00000528001 UGT2A1Q9Y4X1 527 aa11.41□□□□□ -0.58
CNKSR1-211ENST00000528001 IER3IP1Q9Y5U9 82 aa11.41□□□□□ -0.58
CNKSR1-211ENST00000528001 A0A096LPE4 126 aa11.4□□□□□ -0.58
CNKSR1-211ENST00000528001 A0A1W2PPR1 153 aa11.4□□□□□ -0.58
CNKSR1-211ENST00000528001 A0A1W2PPZ6 126 aa11.4□□□□□ -0.58
CNKSR1-211ENST00000528001 TIPRLO75663 272 aa11.4□□□□□ -0.58
CNKSR1-211ENST00000528001 TP53P04637 393 aaPredicted RBP11.4□□□□□ -0.58
CNKSR1-211ENST00000528001 B4GALT1P15291 398 aa11.4□□□□□ -0.58
CNKSR1-211ENST00000528001 CRABP1P29762 137 aa11.4□□□□□ -0.58
CNKSR1-211ENST00000528001 GUCA1AP43080 201 aaPredicted RBP11.4□□□□□ -0.58
CNKSR1-211ENST00000528001 PTDSS1P48651 473 aaKnown RBP11.4□□□□□ -0.58
CNKSR1-211ENST00000528001 KRTAP10-9P60411 292 aa11.4□□□□□ -0.58
CNKSR1-211ENST00000528001 GSG1Q2KHT4 349 aa11.4□□□□□ -0.58
CNKSR1-211ENST00000528001 FAM27BQ5VT28 67 aa11.4□□□□□ -0.58
CNKSR1-211ENST00000528001 DNM1P34Q6PK57 102 aa11.4□□□□□ -0.58
CNKSR1-211ENST00000528001 PAMR1Q6UXH9 720 aa11.4□□□□□ -0.58
CNKSR1-211ENST00000528001 TMEM179BQ7Z7N9 219 aa11.4□□□□□ -0.58
CNKSR1-211ENST00000528001 SYT9Q86SS6 491 aa11.4□□□□□ -0.58
CNKSR1-211ENST00000528001 DEPDC4Q8N2C3 294 aa11.4□□□□□ -0.58
CNKSR1-211ENST00000528001 SVOPLQ8N434 492 aa11.4□□□□□ -0.58
CNKSR1-211ENST00000528001 ZNF611Q8N823 705 aa11.4□□□□□ -0.58
CNKSR1-211ENST00000528001 NABP1Q96AH0 204 aa11.4□□□□□ -0.58
CNKSR1-211ENST00000528001 MBD6Q96DN6 1003 aa11.4□□□□□ -0.58
CNKSR1-211ENST00000528001 SAMD8Q96LT4 415 aa11.4□□□□□ -0.58
CNKSR1-211ENST00000528001 ZNF75AQ96N20 296 aa11.4□□□□□ -0.58
CNKSR1-211ENST00000528001 ERMAPQ96PL5 475 aaPredicted RBP11.4□□□□□ -0.58
CNKSR1-211ENST00000528001 SLC38A2Q96QD8 506 aa11.4□□□□□ -0.58
CNKSR1-211ENST00000528001 HS3ST6Q96QI5 342 aa11.4□□□□□ -0.58
CNKSR1-211ENST00000528001 IFT27Q9BW83 186 aa11.4□□□□□ -0.58
CNKSR1-211ENST00000528001 GRIP2Q9C0E4 1043 aa11.4□□□□□ -0.58
CNKSR1-211ENST00000528001 C1orf198Q9H425 327 aa11.4□□□□□ -0.58
CNKSR1-211ENST00000528001 ZNF224Q9NZL3 707 aa11.4□□□□□ -0.58
CNKSR1-211ENST00000528001 CACNA1DQ01668 2161 aa11.4□□□□□ -0.59
CNKSR1-211ENST00000528001 IGHV1-18A0A0C4DH31 117 aa11.39□□□□□ -0.59
CNKSR1-211ENST00000528001 ABCD4O14678 606 aa11.39□□□□□ -0.59
CNKSR1-211ENST00000528001 HS3ST1O14792 307 aa11.39□□□□□ -0.59
CNKSR1-211ENST00000528001 SLC2A10O95528 541 aa11.39□□□□□ -0.59
CNKSR1-211ENST00000528001 PPP1R3DO95685 299 aa11.39□□□□□ -0.59
CNKSR1-211ENST00000528001 ZNF83P51522 516 aa11.39□□□□□ -0.59
CNKSR1-211ENST00000528001 IST1P53990 364 aa11.39□□□□□ -0.59
CNKSR1-211ENST00000528001 PPP1R8Q12972 351 aaKnown RBP11.39□□□□□ -0.59
CNKSR1-211ENST00000528001 SLC36A2Q495M3 483 aa11.39□□□□□ -0.59
CNKSR1-211ENST00000528001 ZNF672Q499Z4 452 aaPredicted RBP11.39□□□□□ -0.59
CNKSR1-211ENST00000528001 FAHD1Q6P587 224 aa11.39□□□□□ -0.59
CNKSR1-211ENST00000528001 PARP8Q8N3A8 854 aa11.39□□□□□ -0.59
CNKSR1-211ENST00000528001 OR2T33Q8NG76 320 aa11.39□□□□□ -0.59
CNKSR1-211ENST00000528001 GTPBP3Q969Y2 492 aaKnown RBP11.39□□□□□ -0.59
CNKSR1-211ENST00000528001 RASD2Q96D21 266 aa11.39□□□□□ -0.59
CNKSR1-211ENST00000528001 CENPNQ96H22 339 aaPredicted RBP11.39□□□□□ -0.59
CNKSR1-211ENST00000528001 NIPSNAP1Q9BPW8 284 aa11.39□□□□□ -0.59
CNKSR1-211ENST00000528001 RACGAP1Q9H0H5 632 aa11.39□□□□□ -0.59
CNKSR1-211ENST00000528001 GABARAPL1Q9H0R8 117 aa11.39□□□□□ -0.59
CNKSR1-211ENST00000528001 KCNN2Q9H2S1 579 aa11.39□□□□□ -0.59
CNKSR1-211ENST00000528001 REV1Q9UBZ9 1251 aa11.39□□□□□ -0.59
CNKSR1-211ENST00000528001 IL20RAQ9UHF4 553 aa11.39□□□□□ -0.59
CNKSR1-211ENST00000528001 ST6GALNAC2Q9UJ37 374 aa11.39□□□□□ -0.59
CNKSR1-211ENST00000528001 TEX15Q9BXT5 2789 aa11.38□□□□□ -0.59
CNKSR1-211ENST00000528001 IGKV1D-43A0A0B4J1Z2 117 aa11.38□□□□□ -0.59
CNKSR1-211ENST00000528001 A0A1W2PR80 420 aa11.38□□□□□ -0.59
CNKSR1-211ENST00000528001 SHISA9B4DS77 424 aa11.38□□□□□ -0.59
CNKSR1-211ENST00000528001 M0R1B8 84 aa11.38□□□□□ -0.59
CNKSR1-211ENST00000528001 KHDRBS3O75525 346 aaKnown RBP11.38□□□□□ -0.59
CNKSR1-211ENST00000528001 RENP00797 406 aa11.38□□□□□ -0.59
CNKSR1-211ENST00000528001 PTHP01270 115 aa11.38□□□□□ -0.59
CNKSR1-211ENST00000528001 CRYAAP02489 173 aa11.38□□□□□ -0.59
CNKSR1-211ENST00000528001 RAF1P04049 648 aa11.38□□□□□ -0.59
CNKSR1-211ENST00000528001 CST2P09228 141 aa11.38□□□□□ -0.59
CNKSR1-211ENST00000528001 OSMP13725 252 aa11.38□□□□□ -0.59
CNKSR1-211ENST00000528001 HIST1H1CP16403 213 aaKnown RBP11.38□□□□□ -0.59
CNKSR1-211ENST00000528001 ZNF14P17017 642 aaPredicted RBP11.38□□□□□ -0.59
CNKSR1-211ENST00000528001 NOS3P29474 1203 aa11.38□□□□□ -0.59
CNKSR1-211ENST00000528001 CDKN2AP42771 156 aaKnown RBP11.38□□□□□ -0.59
CNKSR1-211ENST00000528001 PCBD1P61457 104 aa11.38□□□□□ -0.59
CNKSR1-211ENST00000528001 LSM6P62312 80 aaKnown RBP11.38□□□□□ -0.59
CNKSR1-211ENST00000528001 RAB1AP62820 205 aa11.38□□□□□ -0.59
CNKSR1-211ENST00000528001 MYBPC1Q00872 1141 aa11.38□□□□□ -0.59
CNKSR1-211ENST00000528001 FMODQ06828 376 aa11.38□□□□□ -0.59
CNKSR1-211ENST00000528001 KPNB1Q14974 876 aaKnown RBP11.38□□□□□ -0.59
CNKSR1-211ENST00000528001 KCNMB1Q16558 191 aa11.38□□□□□ -0.59
CNKSR1-211ENST00000528001 TMEM53Q6P2H8 277 aa11.38□□□□□ -0.59
CNKSR1-211ENST00000528001 PTCHD4Q6ZW05 846 aa11.38□□□□□ -0.59
CNKSR1-211ENST00000528001 SLC16A14Q7RTX9 510 aa11.38□□□□□ -0.59
CNKSR1-211ENST00000528001 CDH24Q86UP0 819 aa11.38□□□□□ -0.59
CNKSR1-211ENST00000528001 ZBTB46Q86UZ6 589 aa11.38□□□□□ -0.59
CNKSR1-211ENST00000528001 MDP1Q86V88 176 aa11.38□□□□□ -0.59
CNKSR1-211ENST00000528001 JAZF1Q86VZ6 243 aa11.38□□□□□ -0.59
CNKSR1-211ENST00000528001 ZDHHC13Q8IUH4 622 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms