RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 NRMQ8IXM6 262 aa8.97□□□□□ -0.97
PRPF40B-204ENST00000527253 OFCC1Q8IZS5 231 aa8.97□□□□□ -0.97
PRPF40B-204ENST00000527253 CLDN22Q8N7P3 220 aa8.97□□□□□ -0.97
PRPF40B-204ENST00000527253 NEU4Q8WWR8 484 aaPredicted RBP8.97□□□□□ -0.97
PRPF40B-204ENST00000527253 NABP1Q96AH0 204 aa8.97□□□□□ -0.97
PRPF40B-204ENST00000527253 MSI2Q96DH6 328 aaKnown RBP8.97□□□□□ -0.97
PRPF40B-204ENST00000527253 BPIFA2Q96DR5 249 aa8.97□□□□□ -0.97
PRPF40B-204ENST00000527253 KCNK17Q96T54 332 aa8.97□□□□□ -0.97
PRPF40B-204ENST00000527253 HOPXQ9BPY8 73 aaPredicted RBP8.97□□□□□ -0.97
PRPF40B-204ENST00000527253 ELAC2Q9BQ52 826 aaKnown RBP8.97□□□□□ -0.97
PRPF40B-204ENST00000527253 PIMREGQ9BSJ6 248 aa8.97□□□□□ -0.97
PRPF40B-204ENST00000527253 BPESC1Q9GZL8 116 aa8.97□□□□□ -0.97
PRPF40B-204ENST00000527253 RAB1BQ9H0U4 201 aa8.97□□□□□ -0.97
PRPF40B-204ENST00000527253 TXNIPQ9H3M7 391 aa8.97□□□□□ -0.97
PRPF40B-204ENST00000527253 TPK1Q9H3S4 243 aa8.97□□□□□ -0.97
PRPF40B-204ENST00000527253 ZNF346Q9UL40 294 aaKnown RBP8.97□□□□□ -0.97
PRPF40B-204ENST00000527253 HIF3AQ9Y2N7 669 aa8.97□□□□□ -0.97
PRPF40B-204ENST00000527253 STAB1Q9NY15 2570 aa8.96□□□□□ -0.97
PRPF40B-204ENST00000527253 TRAV27A0A087WT01 109 aa8.96□□□□□ -0.98
PRPF40B-204ENST00000527253 A0A087WUU8 490 aa8.96□□□□□ -0.98
PRPF40B-204ENST00000527253 LRP5LA4QPB2 252 aa8.96□□□□□ -0.98
PRPF40B-204ENST00000527253 VSTM5A8MXK1 200 aa8.96□□□□□ -0.98
PRPF40B-204ENST00000527253 CENPBD1B2RD01 187 aa8.96□□□□□ -0.98
PRPF40B-204ENST00000527253 MCIDASD6RGH6 385 aa8.96□□□□□ -0.98
PRPF40B-204ENST00000527253 ZNF682O95780 498 aa8.96□□□□□ -0.98
PRPF40B-204ENST00000527253 CLPTM1O96005 669 aa8.96□□□□□ -0.98
PRPF40B-204ENST00000527253 SERPINA1P01009 418 aa8.96□□□□□ -0.98
PRPF40B-204ENST00000527253 FAM157BP0CG42 384 aa8.96□□□□□ -0.98
PRPF40B-204ENST00000527253 TCN1P20061 433 aaPredicted RBP8.96□□□□□ -0.98
PRPF40B-204ENST00000527253 GIFP27352 417 aa8.96□□□□□ -0.98
PRPF40B-204ENST00000527253 IL2RGP31785 369 aa8.96□□□□□ -0.98
PRPF40B-204ENST00000527253 ALDH3B1P43353 468 aa8.96□□□□□ -0.98
PRPF40B-204ENST00000527253 EVX1P49640 407 aa8.96□□□□□ -0.98
PRPF40B-204ENST00000527253 DAP3P51398 398 aaKnown RBP8.96□□□□□ -0.98
PRPF40B-204ENST00000527253 ERVS71-1P61550 626 aa8.96□□□□□ -0.98
PRPF40B-204ENST00000527253 PRKCDQ05655 676 aa8.96□□□□□ -0.98
PRPF40B-204ENST00000527253 TOP3AQ13472 1001 aaPredicted RBP8.96□□□□□ -0.98
PRPF40B-204ENST00000527253 ELFN2Q5R3F8 820 aa8.96□□□□□ -0.98
PRPF40B-204ENST00000527253 HACD2Q6Y1H2 254 aa8.96□□□□□ -0.98
PRPF40B-204ENST00000527253 SLC16A14Q7RTX9 510 aa8.96□□□□□ -0.98
PRPF40B-204ENST00000527253 ZNF786Q8N393 782 aa8.96□□□□□ -0.98
PRPF40B-204ENST00000527253 LRRC18Q8N456 261 aa8.96□□□□□ -0.98
PRPF40B-204ENST00000527253 CPEB3Q8NE35 698 aaKnown RBP8.96□□□□□ -0.98
PRPF40B-204ENST00000527253 SLC30A7Q8NEW0 376 aa8.96□□□□□ -0.98
PRPF40B-204ENST00000527253 OR51A7Q8NH64 312 aa8.96□□□□□ -0.98
PRPF40B-204ENST00000527253 NSMAFQ92636 917 aa8.96□□□□□ -0.98
PRPF40B-204ENST00000527253 HSH2DQ96JZ2 352 aa8.96□□□□□ -0.98
PRPF40B-204ENST00000527253 TSPAN32Q96QS1 320 aa8.96□□□□□ -0.98
PRPF40B-204ENST00000527253 RNF121Q9H920 327 aa8.96□□□□□ -0.98
PRPF40B-204ENST00000527253 EFCAB1Q9HAE3 211 aa8.96□□□□□ -0.98
PRPF40B-204ENST00000527253 DYNLRB1Q9NP97 96 aa8.96□□□□□ -0.98
PRPF40B-204ENST00000527253 MYOZ1Q9NP98 299 aaPredicted RBP8.96□□□□□ -0.98
PRPF40B-204ENST00000527253 REV1Q9UBZ9 1251 aa8.96□□□□□ -0.98
PRPF40B-204ENST00000527253 AP3M1Q9Y2T2 418 aa8.96□□□□□ -0.98
PRPF40B-204ENST00000527253 SPEF1Q9Y4P9 236 aa8.96□□□□□ -0.98
PRPF40B-204ENST00000527253 MXRA5Q9NR99 2828 aa8.95□□□□□ -0.98
PRPF40B-204ENST00000527253 NPIPB13A6NJU9 1138 aa8.95□□□□□ -0.98
PRPF40B-204ENST00000527253 NPIPB4C9JG80 1138 aa8.95□□□□□ -0.98
PRPF40B-204ENST00000527253 CDC42EP2O14613 210 aa8.95□□□□□ -0.98
PRPF40B-204ENST00000527253 GSTA4O15217 222 aa8.95□□□□□ -0.98
PRPF40B-204ENST00000527253 SYNGR3O43761 229 aa8.95□□□□□ -0.98
PRPF40B-204ENST00000527253 MGRN1O60291 552 aa8.95□□□□□ -0.98
PRPF40B-204ENST00000527253 LILRA1O75019 489 aa8.95□□□□□ -0.98
PRPF40B-204ENST00000527253 FARS2O95363 451 aaKnown RBP8.95□□□□□ -0.98
PRPF40B-204ENST00000527253 HPXP02790 462 aa8.95□□□□□ -0.98
PRPF40B-204ENST00000527253 IFNW1P05000 195 aa8.95□□□□□ -0.98
PRPF40B-204ENST00000527253 SCG5P05408 212 aa8.95□□□□□ -0.98
PRPF40B-204ENST00000527253 APEHP13798 732 aaKnown RBP8.95□□□□□ -0.98
PRPF40B-204ENST00000527253 ZNF23P17027 643 aa8.95□□□□□ -0.98
PRPF40B-204ENST00000527253 DRD4P21917 467 aa8.95□□□□□ -0.98
PRPF40B-204ENST00000527253 IGFBP5P24593 272 aa8.95□□□□□ -0.98
PRPF40B-204ENST00000527253 COL8A2P25067 703 aa8.95□□□□□ -0.98
PRPF40B-204ENST00000527253 GZMKP49863 264 aa8.95□□□□□ -0.98
PRPF40B-204ENST00000527253 NUDT2P50583 147 aa8.95□□□□□ -0.98
PRPF40B-204ENST00000527253 ZNF84P51523 738 aa8.95□□□□□ -0.98
PRPF40B-204ENST00000527253 CTXN1P60606 82 aa8.95□□□□□ -0.98
PRPF40B-204ENST00000527253 PSME3P61289 254 aa8.95□□□□□ -0.98
PRPF40B-204ENST00000527253 RPL27P61353 136 aaKnown RBP8.95□□□□□ -0.98
PRPF40B-204ENST00000527253 MRPS34P82930 218 aaKnown RBP8.95□□□□□ -0.98
PRPF40B-204ENST00000527253 RIN1Q13671 783 aa8.95□□□□□ -0.98
PRPF40B-204ENST00000527253 TRAM2Q15035 370 aa8.95□□□□□ -0.98
PRPF40B-204ENST00000527253 TRIP10Q15642 601 aa8.95□□□□□ -0.98
PRPF40B-204ENST00000527253 CHRFAM7AQ494W8 412 aa8.95□□□□□ -0.98
PRPF40B-204ENST00000527253 NRN1LQ496H8 165 aa8.95□□□□□ -0.98
PRPF40B-204ENST00000527253 IQCCQ4KMZ1 466 aa8.95□□□□□ -0.98
PRPF40B-204ENST00000527253 IFI44LQ53G44 452 aa8.95□□□□□ -0.98
PRPF40B-204ENST00000527253 ALG10Q5BKT4 473 aa8.95□□□□□ -0.98
PRPF40B-204ENST00000527253 PABPC1L2AQ5JQF8 200 aa8.95□□□□□ -0.98
PRPF40B-204ENST00000527253 GKAP1Q5VSY0 366 aaPredicted RBP8.95□□□□□ -0.98
PRPF40B-204ENST00000527253 TMEM53Q6P2H8 277 aa8.95□□□□□ -0.98
PRPF40B-204ENST00000527253 DPPA2Q7Z7J5 298 aa8.95□□□□□ -0.98
PRPF40B-204ENST00000527253 OR13C2Q8NGS9 318 aa8.95□□□□□ -0.98
PRPF40B-204ENST00000527253 ZNF519Q8TB69 540 aa8.95□□□□□ -0.98
PRPF40B-204ENST00000527253 UBASH3BQ8TF42 649 aa8.95□□□□□ -0.98
PRPF40B-204ENST00000527253 GEMIN6Q8WXD5 167 aaKnown RBP8.95□□□□□ -0.98
PRPF40B-204ENST00000527253 LZICQ8WZA0 190 aa8.95□□□□□ -0.98
PRPF40B-204ENST00000527253 FNDC11Q9BVV2 318 aa8.95□□□□□ -0.98
PRPF40B-204ENST00000527253 OR51B6Q9H340 312 aa8.95□□□□□ -0.98
PRPF40B-204ENST00000527253 SIAEQ9HAT2 523 aa8.95□□□□□ -0.98
PRPF40B-204ENST00000527253 TMEM160Q9NX00 188 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms