RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 SLC47A2Q86VL8 602 aa3.86□□□□□ -1.79
CD44-213ENST00000525209 PRSS58Q8IYP2 241 aa3.86□□□□□ -1.79
CD44-213ENST00000525209 ABHD12Q8N2K0 398 aa3.86□□□□□ -1.79
CD44-213ENST00000525209 ATP6V1C2Q8NEY4 427 aa3.86□□□□□ -1.79
CD44-213ENST00000525209 OR6K6Q8NGW6 343 aa3.86□□□□□ -1.79
CD44-213ENST00000525209 OR5K2Q8NHB8 316 aa3.86□□□□□ -1.79
CD44-213ENST00000525209 APH1BQ8WW43 257 aa3.86□□□□□ -1.79
CD44-213ENST00000525209 HAS1Q92839 578 aa3.86□□□□□ -1.79
CD44-213ENST00000525209 STMN2Q93045 179 aa3.86□□□□□ -1.79
CD44-213ENST00000525209 TADA1Q96BN2 335 aa3.86□□□□□ -1.79
CD44-213ENST00000525209 PPWD1Q96BP3 646 aaKnown RBP3.86□□□□□ -1.79
CD44-213ENST00000525209 FLYWCH2Q96CP2 140 aaKnown RBP3.86□□□□□ -1.79
CD44-213ENST00000525209 OMA1Q96E52 524 aa3.86□□□□□ -1.79
CD44-213ENST00000525209 Q96MF0 132 aa3.86□□□□□ -1.79
CD44-213ENST00000525209 BBC3Q96PG8 261 aaPredicted RBP3.86□□□□□ -1.79
CD44-213ENST00000525209 STACQ99469 402 aa3.86□□□□□ -1.79
CD44-213ENST00000525209 RNF2Q99496 336 aa3.86□□□□□ -1.79
CD44-213ENST00000525209 TEAD3Q99594 435 aa3.86□□□□□ -1.79
CD44-213ENST00000525209 PSD2Q9BQI7 771 aa3.86□□□□□ -1.79
CD44-213ENST00000525209 ZNF670Q9BS34 389 aa3.86□□□□□ -1.79
CD44-213ENST00000525209 BARHL1Q9BZE3 327 aa3.86□□□□□ -1.79
CD44-213ENST00000525209 MEGF9Q9H1U4 602 aa3.86□□□□□ -1.79
CD44-213ENST00000525209 RNF41Q9H4P4 317 aaPredicted RBP3.86□□□□□ -1.79
CD44-213ENST00000525209 ASB7Q9H672 318 aa3.86□□□□□ -1.79
CD44-213ENST00000525209 GAREM1Q9H706 876 aa3.86□□□□□ -1.79
CD44-213ENST00000525209 MAP6D1Q9H9H5 199 aa3.86□□□□□ -1.79
CD44-213ENST00000525209 TMBIM4Q9HC24 238 aa3.86□□□□□ -1.79
CD44-213ENST00000525209 ZNF334Q9HCZ1 680 aaPredicted RBP3.86□□□□□ -1.79
CD44-213ENST00000525209 ACP6Q9NPH0 428 aa3.86□□□□□ -1.79
CD44-213ENST00000525209 ISYNA1Q9NPH2 558 aa3.86□□□□□ -1.79
CD44-213ENST00000525209 SDR39U1Q9NRG7 319 aaPredicted RBP3.86□□□□□ -1.79
CD44-213ENST00000525209 INTS9Q9NV88 658 aaKnown RBP3.86□□□□□ -1.79
CD44-213ENST00000525209 FGFR1OP2Q9NVK5 253 aa3.86□□□□□ -1.79
CD44-213ENST00000525209 TCF19Q9Y242 345 aa3.86□□□□□ -1.79
CD44-213ENST00000525209 USH1CQ9Y6N9 552 aa3.86□□□□□ -1.79
CD44-213ENST00000525209 NCANO14594 1321 aa3.86□□□□□ -1.79
CD44-213ENST00000525209 XRN1Q8IZH2 1706 aaKnown RBP3.86□□□□□ -1.79
CD44-213ENST00000525209 IFT172Q9UG01 1749 aa3.86□□□□□ -1.79
CD44-213ENST00000525209 NWD2Q9ULI1 1742 aa3.86□□□□□ -1.79
CD44-213ENST00000525209 ARHGEF10O15013 1369 aa3.86□□□□□ -1.79
CD44-213ENST00000525209 TNS3Q68CZ2 1445 aa3.86□□□□□ -1.79
CD44-213ENST00000525209 VPS8Q8N3P4 1428 aa3.86□□□□□ -1.79
CD44-213ENST00000525209 NRKQ7Z2Y5 1582 aa3.85□□□□□ -1.79
CD44-213ENST00000525209 COL22A1Q8NFW1 1626 aaPredicted RBP3.85□□□□□ -1.79
CD44-213ENST00000525209 KIF1AQ12756 1690 aa3.85□□□□□ -1.79
CD44-213ENST00000525209 TRBV5-3A0A0A0MS03 114 aa3.85□□□□□ -1.79
CD44-213ENST00000525209 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.85□□□□□ -1.79
CD44-213ENST00000525209 A0A0G2JNG1 304 aa3.85□□□□□ -1.79
CD44-213ENST00000525209 TCRBV9S1A1TA0A576 114 aa3.85□□□□□ -1.79
CD44-213ENST00000525209 ANKRD20A5PA0PJZ0 165 aa3.85□□□□□ -1.79
CD44-213ENST00000525209 TSPAN11A1L157 253 aa3.85□□□□□ -1.79
CD44-213ENST00000525209 C2orf74A8MZ97 194 aa3.85□□□□□ -1.79
CD44-213ENST00000525209 ANHXE9PGG2 379 aa3.85□□□□□ -1.79
CD44-213ENST00000525209 SIGLEC5O15389 551 aa3.85□□□□□ -1.79
CD44-213ENST00000525209 FGF16O43320 207 aa3.85□□□□□ -1.79
CD44-213ENST00000525209 ITM2AO43736 263 aa3.85□□□□□ -1.79
CD44-213ENST00000525209 HPGDSO60760 199 aa3.85□□□□□ -1.79
CD44-213ENST00000525209 MPDU1O75352 247 aa3.85□□□□□ -1.79
CD44-213ENST00000525209 SRP72O76094 671 aaKnown RBP3.85□□□□□ -1.79
CD44-213ENST00000525209 OXSR1O95747 527 aaPredicted RBP3.85□□□□□ -1.79
CD44-213ENST00000525209 SERPINA1P01009 418 aa3.85□□□□□ -1.79
CD44-213ENST00000525209 JCHAINP01591 159 aa3.85□□□□□ -1.79
CD44-213ENST00000525209 HLA-AP01891 365 aaKnown RBP3.85□□□□□ -1.79
CD44-213ENST00000525209 MELTFP08582 738 aa3.85□□□□□ -1.79
CD44-213ENST00000525209 FAM106CPP0CH98 169 aa3.85□□□□□ -1.79
CD44-213ENST00000525209 IGHV4-31P0DP07 118 aa3.85□□□□□ -1.79
CD44-213ENST00000525209 THRAP10827 490 aa3.85□□□□□ -1.79
CD44-213ENST00000525209 RNH1P13489 461 aaKnown RBP3.85□□□□□ -1.79
CD44-213ENST00000525209 HIST1H1CP16403 213 aaKnown RBP3.85□□□□□ -1.79
CD44-213ENST00000525209 CRABP2P29373 138 aa3.85□□□□□ -1.79
CD44-213ENST00000525209 SERPINB1P30740 379 aa3.85□□□□□ -1.79
CD44-213ENST00000525209 RPL4P36578 427 aaKnown RBP3.85□□□□□ -1.79
CD44-213ENST00000525209 RPL3P39023 403 aaKnown RBP3.85□□□□□ -1.79
CD44-213ENST00000525209 CYB561P49447 251 aa3.85□□□□□ -1.79
CD44-213ENST00000525209 DNA2P51530 1060 aa3.85□□□□□ -1.79
CD44-213ENST00000525209 IDH3GP51553 393 aaPredicted RBP3.85□□□□□ -1.79
CD44-213ENST00000525209 SEC61A1P61619 476 aaKnown RBP3.85□□□□□ -1.79
CD44-213ENST00000525209 BTG1P62324 171 aa3.85□□□□□ -1.79
CD44-213ENST00000525209 TLE4Q04727 773 aa3.85□□□□□ -1.79
CD44-213ENST00000525209 MLLT11Q13015 90 aaPredicted RBP3.85□□□□□ -1.79
CD44-213ENST00000525209 SRSF6Q13247 344 aaKnown RBP3.85□□□□□ -1.79
CD44-213ENST00000525209 LAGE3Q14657 143 aa3.85□□□□□ -1.79
CD44-213ENST00000525209 GNMTQ14749 295 aa3.85□□□□□ -1.79
CD44-213ENST00000525209 KIR2DS5Q14953 304 aa3.85□□□□□ -1.79
CD44-213ENST00000525209 EMC2Q15006 297 aa3.85□□□□□ -1.79
CD44-213ENST00000525209 DUSP5Q16690 384 aa3.85□□□□□ -1.79
CD44-213ENST00000525209 TIGITQ495A1 244 aa3.85□□□□□ -1.79
CD44-213ENST00000525209 ACSM3Q53FZ2 586 aa3.85□□□□□ -1.79
CD44-213ENST00000525209 EIPR1Q53HC9 387 aa3.85□□□□□ -1.79
CD44-213ENST00000525209 CCNJQ5T5M9 372 aa3.85□□□□□ -1.79
CD44-213ENST00000525209 OGFRL1Q5TC84 451 aaPredicted RBP3.85□□□□□ -1.79
CD44-213ENST00000525209 PARM1Q6UWI2 310 aa3.85□□□□□ -1.79
CD44-213ENST00000525209 TTLL10Q6ZVT0 673 aa3.85□□□□□ -1.79
CD44-213ENST00000525209 ZNF554Q86TJ5 538 aa3.85□□□□□ -1.79
CD44-213ENST00000525209 TRAPPC5Q8IUR0 188 aa3.85□□□□□ -1.79
CD44-213ENST00000525209 WDFY1Q8IWB7 410 aa3.85□□□□□ -1.79
CD44-213ENST00000525209 DNAJC22Q8N4W6 341 aa3.85□□□□□ -1.79
CD44-213ENST00000525209 MREGQ8N565 214 aa3.85□□□□□ -1.79
CD44-213ENST00000525209 MAPKAPK5-AS1Q8N8E1 139 aa3.85□□□□□ -1.79
CD44-213ENST00000525209 MDS2Q8NDY4 140 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms