RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 MYEF2Q9P2K5 600 aaKnown RBP16.09■□□□□ 0.17
SPIDR-220ENST00000522900 ZNF346Q9UL40 294 aaKnown RBP16.09■□□□□ 0.17
SPIDR-220ENST00000522900 SPEF1Q9Y4P9 236 aa16.09■□□□□ 0.17
SPIDR-220ENST00000522900 UGT2A1Q9Y4X1 527 aa16.09■□□□□ 0.17
SPIDR-220ENST00000522900 ABCA2Q9BZC7 2435 aa16.09■□□□□ 0.17
SPIDR-220ENST00000522900 JMJD1CQ15652 2540 aa16.09■□□□□ 0.17
SPIDR-220ENST00000522900 ABCA1O95477 2261 aa16.08■□□□□ 0.17
SPIDR-220ENST00000522900 A0A087WUU8 490 aa16.08■□□□□ 0.16
SPIDR-220ENST00000522900 IGHV4-61A0A0C4DH41 118 aa16.08■□□□□ 0.16
SPIDR-220ENST00000522900 LOC390937A0A1W2PQ73 354 aa16.08■□□□□ 0.16
SPIDR-220ENST00000522900 CENPBD1B2RD01 187 aa16.08■□□□□ 0.16
SPIDR-220ENST00000522900 NDUFS8O00217 210 aa16.08■□□□□ 0.16
SPIDR-220ENST00000522900 FARS2O95363 451 aaKnown RBP16.08■□□□□ 0.16
SPIDR-220ENST00000522900 STAMBPO95630 424 aa16.08■□□□□ 0.16
SPIDR-220ENST00000522900 DAOP14920 347 aa16.08■□□□□ 0.16
SPIDR-220ENST00000522900 DRD4P21917 467 aa16.08■□□□□ 0.16
SPIDR-220ENST00000522900 IFNA8P32881 189 aa16.08■□□□□ 0.16
SPIDR-220ENST00000522900 GLRXP35754 106 aa16.08■□□□□ 0.16
SPIDR-220ENST00000522900 ZNF84P51523 738 aa16.08■□□□□ 0.16
SPIDR-220ENST00000522900 PRKCDQ05655 676 aa16.08■□□□□ 0.16
SPIDR-220ENST00000522900 TOP3AQ13472 1001 aaPredicted RBP16.08■□□□□ 0.16
SPIDR-220ENST00000522900 TRAM2Q15035 370 aa16.08■□□□□ 0.16
SPIDR-220ENST00000522900 C10orf128Q5T292 105 aa16.08■□□□□ 0.16
SPIDR-220ENST00000522900 SLC16A14Q7RTX9 510 aa16.08■□□□□ 0.16
SPIDR-220ENST00000522900 HIPK1Q86Z02 1210 aa16.08■□□□□ 0.16
SPIDR-220ENST00000522900 CLDN22Q8N7P3 220 aa16.08■□□□□ 0.16
SPIDR-220ENST00000522900 GEMIN6Q8WXD5 167 aaKnown RBP16.08■□□□□ 0.16
SPIDR-220ENST00000522900 NSMAFQ92636 917 aa16.08■□□□□ 0.16
SPIDR-220ENST00000522900 MDFIQ99750 246 aa16.08■□□□□ 0.16
SPIDR-220ENST00000522900 KCTD14Q9BQ13 255 aaPredicted RBP16.08■□□□□ 0.16
SPIDR-220ENST00000522900 DYNLRB1Q9NP97 96 aa16.08■□□□□ 0.16
SPIDR-220ENST00000522900 ABCD2Q9UBJ2 740 aa16.08■□□□□ 0.16
SPIDR-220ENST00000522900 FBXL3Q9UKT7 428 aa16.08■□□□□ 0.16
SPIDR-220ENST00000522900 TRAV27A0A087WT01 109 aa16.07■□□□□ 0.16
SPIDR-220ENST00000522900 LYNX1G3V0Z9 82 aa16.07■□□□□ 0.16
SPIDR-220ENST00000522900 MMP7P09237 267 aaPredicted RBP16.07■□□□□ 0.16
SPIDR-220ENST00000522900 LYNX1P0DP58 116 aa16.07■□□□□ 0.16
SPIDR-220ENST00000522900 SAGP10523 405 aaPredicted RBP16.07■□□□□ 0.16
SPIDR-220ENST00000522900 TCN1P20061 433 aaPredicted RBP16.07■□□□□ 0.16
SPIDR-220ENST00000522900 ALDH3B1P43353 468 aa16.07■□□□□ 0.16
SPIDR-220ENST00000522900 GYS2P54840 703 aa16.07■□□□□ 0.16
SPIDR-220ENST00000522900 CTXN1P60606 82 aa16.07■□□□□ 0.16
SPIDR-220ENST00000522900 RPL27P61353 136 aaKnown RBP16.07■□□□□ 0.16
SPIDR-220ENST00000522900 GALK2Q01415 458 aa16.07■□□□□ 0.16
SPIDR-220ENST00000522900 MAD2L1BPQ15013 274 aaPredicted RBP16.07■□□□□ 0.16
SPIDR-220ENST00000522900 CYB5R2Q6BCY4 276 aa16.07■□□□□ 0.16
SPIDR-220ENST00000522900 TMEM53Q6P2H8 277 aa16.07■□□□□ 0.16
SPIDR-220ENST00000522900 SLC25A47Q6Q0C1 308 aa16.07■□□□□ 0.16
SPIDR-220ENST00000522900 SLC30A7Q8NEW0 376 aa16.07■□□□□ 0.16
SPIDR-220ENST00000522900 OR13C2Q8NGS9 318 aa16.07■□□□□ 0.16
SPIDR-220ENST00000522900 NEU4Q8WWR8 484 aaPredicted RBP16.07■□□□□ 0.16
SPIDR-220ENST00000522900 FAM162AQ96A26 154 aa16.07■□□□□ 0.16
SPIDR-220ENST00000522900 NABP1Q96AH0 204 aa16.07■□□□□ 0.16
SPIDR-220ENST00000522900 CMTM5Q96DZ9 223 aa16.07■□□□□ 0.16
SPIDR-220ENST00000522900 KCNK17Q96T54 332 aa16.07■□□□□ 0.16
SPIDR-220ENST00000522900 BPESC1Q9GZL8 116 aa16.07■□□□□ 0.16
SPIDR-220ENST00000522900 MYOZ1Q9NP98 299 aaPredicted RBP16.07■□□□□ 0.16
SPIDR-220ENST00000522900 REV1Q9UBZ9 1251 aa16.07■□□□□ 0.16
SPIDR-220ENST00000522900 EGFL7Q9UHF1 273 aa16.07■□□□□ 0.16
SPIDR-220ENST00000522900 FBXO9Q9UK97 447 aaPredicted RBP16.07■□□□□ 0.16
SPIDR-220ENST00000522900 FBN1P35555 2871 aaKnown RBP16.07■□□□□ 0.16
SPIDR-220ENST00000522900 SONP18583 2426 aaKnown RBP16.06■□□□□ 0.16
SPIDR-220ENST00000522900 HTR3EA5X5Y0 456 aa16.06■□□□□ 0.16
SPIDR-220ENST00000522900 NPIPB13A6NJU9 1138 aa16.06■□□□□ 0.16
SPIDR-220ENST00000522900 NPIPB4C9JG80 1138 aa16.06■□□□□ 0.16
SPIDR-220ENST00000522900 SYNGR3O43761 229 aa16.06■□□□□ 0.16
SPIDR-220ENST00000522900 SNX3O60493 162 aa16.06■□□□□ 0.16
SPIDR-220ENST00000522900 ENTPD5O75356 428 aa16.06■□□□□ 0.16
SPIDR-220ENST00000522900 FAM157BP0CG42 384 aa16.06■□□□□ 0.16
SPIDR-220ENST00000522900 ZNF16P17020 682 aaPredicted RBP16.06■□□□□ 0.16
SPIDR-220ENST00000522900 EVX1P49640 407 aa16.06■□□□□ 0.16
SPIDR-220ENST00000522900 CD47Q08722 323 aa16.06■□□□□ 0.16
SPIDR-220ENST00000522900 SLC36A2Q495M3 483 aa16.06■□□□□ 0.16
SPIDR-220ENST00000522900 NRN1LQ496H8 165 aa16.06■□□□□ 0.16
SPIDR-220ENST00000522900 ZNF730Q6ZMV8 503 aa16.06■□□□□ 0.16
SPIDR-220ENST00000522900 HDDC2Q7Z4H3 204 aa16.06■□□□□ 0.16
SPIDR-220ENST00000522900 OAFQ86UD1 273 aa16.06■□□□□ 0.16
SPIDR-220ENST00000522900 RNF148Q8N7C7 305 aa16.06■□□□□ 0.16
SPIDR-220ENST00000522900 CPEB3Q8NE35 698 aaKnown RBP16.06■□□□□ 0.16
SPIDR-220ENST00000522900 ACOT11Q8WXI4 607 aaPredicted RBP16.06■□□□□ 0.16
SPIDR-220ENST00000522900 TSPAN32Q96QS1 320 aa16.06■□□□□ 0.16
SPIDR-220ENST00000522900 OR51B6Q9H340 312 aa16.06■□□□□ 0.16
SPIDR-220ENST00000522900 SIAEQ9HAT2 523 aa16.06■□□□□ 0.16
SPIDR-220ENST00000522900 SLC7A8Q9UHI5 535 aa16.06■□□□□ 0.16
SPIDR-220ENST00000522900 DUSP13Q9UII6 198 aa16.06■□□□□ 0.16
SPIDR-220ENST00000522900 EFCAB9A8MZ26 197 aa16.05■□□□□ 0.16
SPIDR-220ENST00000522900 CDC42EP2O14613 210 aa16.05■□□□□ 0.16
SPIDR-220ENST00000522900 IGHMP01871 453 aa16.05■□□□□ 0.16
SPIDR-220ENST00000522900 ZNF26P17031 533 aaPredicted RBP16.05■□□□□ 0.16
SPIDR-220ENST00000522900 ERVS71-1P61550 626 aa16.05■□□□□ 0.16
SPIDR-220ENST00000522900 MRPS34P82930 218 aaKnown RBP16.05■□□□□ 0.16
SPIDR-220ENST00000522900 SGCAQ16586 387 aa16.05■□□□□ 0.16
SPIDR-220ENST00000522900 IQCCQ4KMZ1 466 aa16.05■□□□□ 0.16
SPIDR-220ENST00000522900 GLYATQ6IB77 296 aa16.05■□□□□ 0.16
SPIDR-220ENST00000522900 MBOAT2Q6ZWT7 520 aa16.05■□□□□ 0.16
SPIDR-220ENST00000522900 DPPA2Q7Z7J5 298 aa16.05■□□□□ 0.16
SPIDR-220ENST00000522900 RNF113BQ8IZP6 322 aaKnown RBP16.05■□□□□ 0.16
SPIDR-220ENST00000522900 ZNF786Q8N393 782 aa16.05■□□□□ 0.16
SPIDR-220ENST00000522900 FAM86B1Q8N7N1 296 aa16.05■□□□□ 0.16
SPIDR-220ENST00000522900 ZNF519Q8TB69 540 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms