RNA–Protein interactions for RNA: ENST00000520895.5

HDAC2-209, Transcript of histone deacetylase 2, humanhuman

TSL 4

Gene HDAC2, Length 551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-209ENST00000520895 LIME1Q9H400 295 aa13.48□□□□□ -0.25
HDAC2-209ENST00000520895 TMEM38BQ9NVV0 291 aa13.48□□□□□ -0.25
HDAC2-209ENST00000520895 POLQO75417 2590 aa13.47□□□□□ -0.25
HDAC2-209ENST00000520895 H7C1C5 153 aa13.47□□□□□ -0.25
HDAC2-209ENST00000520895 AHCYL1O43865 530 aa13.47□□□□□ -0.25
HDAC2-209ENST00000520895 DEAF1O75398 565 aaPredicted RBP13.47□□□□□ -0.25
HDAC2-209ENST00000520895 TIPRLO75663 272 aa13.47□□□□□ -0.25
HDAC2-209ENST00000520895 UBL3O95164 117 aa13.47□□□□□ -0.25
HDAC2-209ENST00000520895 HLA-HP01893 362 aa13.47□□□□□ -0.25
HDAC2-209ENST00000520895 APEHP13798 732 aaKnown RBP13.47□□□□□ -0.25
HDAC2-209ENST00000520895 CBR1P16152 277 aa13.47□□□□□ -0.25
HDAC2-209ENST00000520895 DNASE1P24855 282 aa13.47□□□□□ -0.25
HDAC2-209ENST00000520895 NOS3P29474 1203 aa13.47□□□□□ -0.25
HDAC2-209ENST00000520895 ARR3P36575 388 aa13.47□□□□□ -0.25
HDAC2-209ENST00000520895 GUCA1AP43080 201 aaPredicted RBP13.47□□□□□ -0.25
HDAC2-209ENST00000520895 ZNF133P52736 654 aaPredicted RBP13.47□□□□□ -0.25
HDAC2-209ENST00000520895 LCN6P62502 163 aa13.47□□□□□ -0.25
HDAC2-209ENST00000520895 PIGFQ07326 219 aa13.47□□□□□ -0.25
HDAC2-209ENST00000520895 KEAP1Q14145 624 aa13.47□□□□□ -0.25
HDAC2-209ENST00000520895 GSG1Q2KHT4 349 aa13.47□□□□□ -0.25
HDAC2-209ENST00000520895 MESTQ5EB52 335 aa13.47□□□□□ -0.25
HDAC2-209ENST00000520895 ADCK1Q86TW2 530 aa13.47□□□□□ -0.25
HDAC2-209ENST00000520895 KBTBD8Q8NFY9 601 aa13.47□□□□□ -0.25
HDAC2-209ENST00000520895 UTP4Q969X6 686 aaKnown RBP13.47□□□□□ -0.25
HDAC2-209ENST00000520895 NMD3Q96D46 503 aaKnown RBP13.47□□□□□ -0.25
HDAC2-209ENST00000520895 KCNS3Q9BQ31 491 aa13.47□□□□□ -0.25
HDAC2-209ENST00000520895 DGCR6LQ9BY27 220 aa13.47□□□□□ -0.25
HDAC2-209ENST00000520895 DENND2DQ9H6A0 471 aaPredicted RBP13.47□□□□□ -0.25
HDAC2-209ENST00000520895 PDP1Q9P0J1 537 aaPredicted RBP13.47□□□□□ -0.25
HDAC2-209ENST00000520895 ST6GALNAC2Q9UJ37 374 aa13.47□□□□□ -0.25
HDAC2-209ENST00000520895 POU2F3Q9UKI9 436 aa13.47□□□□□ -0.25
HDAC2-209ENST00000520895 PLEKHA6Q9Y2H5 1048 aa13.47□□□□□ -0.25
HDAC2-209ENST00000520895 AP4S1Q9Y587 144 aa13.47□□□□□ -0.25
HDAC2-209ENST00000520895 CDH10Q9Y6N8 788 aa13.47□□□□□ -0.25
HDAC2-209ENST00000520895 AKAP6Q13023 2319 aa13.47□□□□□ -0.25
HDAC2-209ENST00000520895 SPG11Q96JI7 2443 aa13.47□□□□□ -0.25
HDAC2-209ENST00000520895 IGHV1-18A0A0C4DH31 117 aa13.46□□□□□ -0.25
HDAC2-209ENST00000520895 SLC22A23A1A5C7 686 aa13.46□□□□□ -0.25
HDAC2-209ENST00000520895 PRSS37A4D1T9 235 aa13.46□□□□□ -0.25
HDAC2-209ENST00000520895 ARRDC5A6NEK1 342 aa13.46□□□□□ -0.25
HDAC2-209ENST00000520895 IMPA2O14732 288 aa13.46□□□□□ -0.25
HDAC2-209ENST00000520895 HS3ST1O14792 307 aa13.46□□□□□ -0.25
HDAC2-209ENST00000520895 RAB36O95755 333 aa13.46□□□□□ -0.25
HDAC2-209ENST00000520895 RAF1P04049 648 aa13.46□□□□□ -0.25
HDAC2-209ENST00000520895 NPR2P20594 1047 aa13.46□□□□□ -0.25
HDAC2-209ENST00000520895 NPRL3Q12980 569 aa13.46□□□□□ -0.25
HDAC2-209ENST00000520895 SGCAQ16586 387 aa13.46□□□□□ -0.25
HDAC2-209ENST00000520895 NRN1LQ496H8 165 aa13.46□□□□□ -0.25
HDAC2-209ENST00000520895 CLEC12AQ5QGZ9 265 aa13.46□□□□□ -0.25
HDAC2-209ENST00000520895 SLC25A47Q6Q0C1 308 aa13.46□□□□□ -0.25
HDAC2-209ENST00000520895 C20orf204Q6ZNR8 217 aa13.46□□□□□ -0.25
HDAC2-209ENST00000520895 RASSF6Q6ZTQ3 369 aa13.46□□□□□ -0.25
HDAC2-209ENST00000520895 SLC16A14Q7RTX9 510 aa13.46□□□□□ -0.25
HDAC2-209ENST00000520895 TMEM179BQ7Z7N9 219 aa13.46□□□□□ -0.25
HDAC2-209ENST00000520895 MDP1Q86V88 176 aa13.46□□□□□ -0.25
HDAC2-209ENST00000520895 JAZF1Q86VZ6 243 aa13.46□□□□□ -0.25
HDAC2-209ENST00000520895 SKA3Q8IX90 412 aa13.46□□□□□ -0.25
HDAC2-209ENST00000520895 FAM169BQ8N8A8 192 aa13.46□□□□□ -0.25
HDAC2-209ENST00000520895 NINJ1Q92982 152 aa13.46□□□□□ -0.25
HDAC2-209ENST00000520895 RAB3IPQ96QF0 476 aaPredicted RBP13.46□□□□□ -0.25
HDAC2-209ENST00000520895 FEVQ99581 238 aa13.46□□□□□ -0.25
HDAC2-209ENST00000520895 SH3GL3Q99963 347 aa13.46□□□□□ -0.25
HDAC2-209ENST00000520895 KCNN2Q9H2S1 579 aa13.46□□□□□ -0.25
HDAC2-209ENST00000520895 EGLN3Q9H6Z9 239 aa13.46□□□□□ -0.25
HDAC2-209ENST00000520895 SEC61A2Q9H9S3 476 aa13.46□□□□□ -0.25
HDAC2-209ENST00000520895 ZNF556Q9HAH1 456 aa13.46□□□□□ -0.25
HDAC2-209ENST00000520895 TBC1D23Q9NUY8 699 aa13.46□□□□□ -0.25
HDAC2-209ENST00000520895 ARMC1Q9NVT9 282 aa13.46□□□□□ -0.25
HDAC2-209ENST00000520895 CRNNQ9UBG3 495 aaPredicted RBP13.46□□□□□ -0.25
HDAC2-209ENST00000520895 CADP27708 2225 aa13.45□□□□□ -0.26
HDAC2-209ENST00000520895 IGKV1D-43A0A0B4J1Z2 117 aa13.45□□□□□ -0.26
HDAC2-209ENST00000520895 A0A1W2PPL8 197 aa13.45□□□□□ -0.26
HDAC2-209ENST00000520895 ZNF503-AS2A6NEH8 195 aa13.45□□□□□ -0.26
HDAC2-209ENST00000520895 ARPC3O15145 178 aa13.45□□□□□ -0.26
HDAC2-209ENST00000520895 IDH3BO43837 385 aa13.45□□□□□ -0.26
HDAC2-209ENST00000520895 TXNDC12O95881 172 aa13.45□□□□□ -0.26
HDAC2-209ENST00000520895 IGKV3-15P01624 115 aa13.45□□□□□ -0.26
HDAC2-209ENST00000520895 CRYAAP02489 173 aa13.45□□□□□ -0.26
HDAC2-209ENST00000520895 FCGR1AP12314 374 aa13.45□□□□□ -0.26
HDAC2-209ENST00000520895 FASP25445 335 aa13.45□□□□□ -0.26
HDAC2-209ENST00000520895 CDAP32320 146 aa13.45□□□□□ -0.26
HDAC2-209ENST00000520895 PTDSS1P48651 473 aaKnown RBP13.45□□□□□ -0.26
HDAC2-209ENST00000520895 IDH3GP51553 393 aaPredicted RBP13.45□□□□□ -0.26
HDAC2-209ENST00000520895 CDH11P55287 796 aa13.45□□□□□ -0.26
HDAC2-209ENST00000520895 RAB1AP62820 205 aa13.45□□□□□ -0.26
HDAC2-209ENST00000520895 MRPS34P82930 218 aaKnown RBP13.45□□□□□ -0.26
HDAC2-209ENST00000520895 SPOCK1Q08629 439 aa13.45□□□□□ -0.26
HDAC2-209ENST00000520895 COX10Q12887 443 aa13.45□□□□□ -0.26
HDAC2-209ENST00000520895 C3orf36Q3SXR2 165 aa13.45□□□□□ -0.26
HDAC2-209ENST00000520895 SLC36A2Q495M3 483 aa13.45□□□□□ -0.26
HDAC2-209ENST00000520895 ZNF672Q499Z4 452 aaPredicted RBP13.45□□□□□ -0.26
HDAC2-209ENST00000520895 DPPA2Q7Z7J5 298 aa13.45□□□□□ -0.26
HDAC2-209ENST00000520895 LRRC18Q8N456 261 aa13.45□□□□□ -0.26
HDAC2-209ENST00000520895 HTRA1Q92743 480 aa13.45□□□□□ -0.26
HDAC2-209ENST00000520895 NEUROG1Q92886 237 aa13.45□□□□□ -0.26
HDAC2-209ENST00000520895 FBXW5Q969U6 566 aa13.45□□□□□ -0.26
HDAC2-209ENST00000520895 DUS3LQ96G46 650 aaKnown RBP13.45□□□□□ -0.26
HDAC2-209ENST00000520895 NIPSNAP1Q9BPW8 284 aa13.45□□□□□ -0.26
HDAC2-209ENST00000520895 SYT4Q9H2B2 425 aa13.45□□□□□ -0.26
HDAC2-209ENST00000520895 RERGLQ9H628 205 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms