RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-208ENST00000520228 FADS1O60427 444 aa6.08□□□□□ -1.44
SDCBP-208ENST00000520228 SCN2BO60939 215 aa6.08□□□□□ -1.44
SDCBP-208ENST00000520228 CBR3O75828 277 aa6.08□□□□□ -1.44
SDCBP-208ENST00000520228 KCNK2O95069 426 aa6.08□□□□□ -1.44
SDCBP-208ENST00000520228 UTS2O95399 124 aa6.08□□□□□ -1.44
SDCBP-208ENST00000520228 CPSF4O95639 269 aaKnown RBP6.08□□□□□ -1.44
SDCBP-208ENST00000520228 IGKV1D-16P01601 117 aa6.08□□□□□ -1.44
SDCBP-208ENST00000520228 IGHV4-39P01824 125 aa6.08□□□□□ -1.44
SDCBP-208ENST00000520228 IL6P05231 212 aa6.08□□□□□ -1.44
SDCBP-208ENST00000520228 TFAP2AP05549 437 aa6.08□□□□□ -1.44
SDCBP-208ENST00000520228 HPNP05981 417 aa6.08□□□□□ -1.44
SDCBP-208ENST00000520228 RNF224P0DH78 156 aa6.08□□□□□ -1.44
SDCBP-208ENST00000520228 IL11P20809 199 aa6.08□□□□□ -1.44
SDCBP-208ENST00000520228 PTPN6P29350 595 aa6.08□□□□□ -1.44
SDCBP-208ENST00000520228 IL12AP29459 219 aa6.08□□□□□ -1.44
SDCBP-208ENST00000520228 EVI2BP34910 448 aa6.08□□□□□ -1.44
SDCBP-208ENST00000520228 MMP15P51511 669 aa6.08□□□□□ -1.44
SDCBP-208ENST00000520228 AQP5P55064 265 aa6.08□□□□□ -1.44
SDCBP-208ENST00000520228 OR5M10Q6IEU7 315 aa6.08□□□□□ -1.44
SDCBP-208ENST00000520228 C3P1Q6ZMU1 363 aa6.08□□□□□ -1.44
SDCBP-208ENST00000520228 KCTD8Q6ZWB6 473 aa6.08□□□□□ -1.44
SDCBP-208ENST00000520228 C6orf120Q7Z4R8 191 aa6.08□□□□□ -1.44
SDCBP-208ENST00000520228 MARCH3Q86UD3 253 aa6.08□□□□□ -1.44
SDCBP-208ENST00000520228 PLCZ1Q86YW0 608 aa6.08□□□□□ -1.44
SDCBP-208ENST00000520228 EID3Q8N140 333 aa6.08□□□□□ -1.44
SDCBP-208ENST00000520228 CLEC4FQ8N1N0 589 aa6.08□□□□□ -1.44
SDCBP-208ENST00000520228 ARFGAP2Q8N6H7 521 aa6.08□□□□□ -1.44
SDCBP-208ENST00000520228 COX18Q8N8Q8 333 aa6.08□□□□□ -1.44
SDCBP-208ENST00000520228 WDSUB1Q8N9V3 476 aa6.08□□□□□ -1.44
SDCBP-208ENST00000520228 OR5M9Q8NGP3 310 aa6.08□□□□□ -1.44
SDCBP-208ENST00000520228 OR5AK3PQ8NH89 298 aa6.08□□□□□ -1.44
SDCBP-208ENST00000520228 NEIL3Q8TAT5 605 aa6.08□□□□□ -1.44
SDCBP-208ENST00000520228 FAM110BQ8TC76 370 aa6.08□□□□□ -1.44
SDCBP-208ENST00000520228 RNF138Q8WVD3 245 aa6.08□□□□□ -1.44
SDCBP-208ENST00000520228 CDS1Q92903 461 aa6.08□□□□□ -1.44
SDCBP-208ENST00000520228 OTUB1Q96FW1 271 aaPredicted RBP6.08□□□□□ -1.44
SDCBP-208ENST00000520228 CCDC115Q96NT0 180 aa6.08□□□□□ -1.44
SDCBP-208ENST00000520228 OR52E6Q96RD3 313 aa6.08□□□□□ -1.44
SDCBP-208ENST00000520228 ABHD1Q96SE0 405 aa6.08□□□□□ -1.44
SDCBP-208ENST00000520228 CDRT15Q96T59 188 aa6.08□□□□□ -1.44
SDCBP-208ENST00000520228 STACQ99469 402 aa6.08□□□□□ -1.44
SDCBP-208ENST00000520228 TBL1XR1Q9BZK7 514 aa6.08□□□□□ -1.44
SDCBP-208ENST00000520228 UBQLN3Q9H347 655 aa6.08□□□□□ -1.44
SDCBP-208ENST00000520228 PIGUQ9H490 435 aa6.08□□□□□ -1.44
SDCBP-208ENST00000520228 CHMP1AQ9HD42 196 aaPredicted RBP6.08□□□□□ -1.44
SDCBP-208ENST00000520228 TCF7L2Q9NQB0 619 aa6.08□□□□□ -1.44
SDCBP-208ENST00000520228 SDR39U1Q9NRG7 319 aaPredicted RBP6.08□□□□□ -1.44
SDCBP-208ENST00000520228 SDHAF3Q9NRP4 125 aa6.08□□□□□ -1.44
SDCBP-208ENST00000520228 FAM120CQ9NX05 1096 aaKnown RBP6.08□□□□□ -1.44
SDCBP-208ENST00000520228 GIN1Q9NXP7 522 aa6.08□□□□□ -1.44
SDCBP-208ENST00000520228 FLRT3Q9NZU0 649 aa6.08□□□□□ -1.44
SDCBP-208ENST00000520228 BTNL2Q9UIR0 455 aa6.08□□□□□ -1.44
SDCBP-208ENST00000520228 MEMO1Q9Y316 297 aa6.08□□□□□ -1.44
SDCBP-208ENST00000520228 WIF1Q9Y5W5 379 aa6.08□□□□□ -1.44
SDCBP-208ENST00000520228 LIPGQ9Y5X9 500 aa6.08□□□□□ -1.44
SDCBP-208ENST00000520228 DOPEY1Q5JWR5 2465 aa6.08□□□□□ -1.44
SDCBP-208ENST00000520228 SPTAN1Q13813 2472 aaKnown RBP6.07□□□□□ -1.44
SDCBP-208ENST00000520228 DUXAA6NLW8 204 aa6.07□□□□□ -1.44
SDCBP-208ENST00000520228 ZG16O60844 167 aa6.07□□□□□ -1.44
SDCBP-208ENST00000520228 HPGDP15428 266 aa6.07□□□□□ -1.44
SDCBP-208ENST00000520228 ATP6V1C1P21283 382 aa6.07□□□□□ -1.44
SDCBP-208ENST00000520228 TBXA2RP21731 343 aa6.07□□□□□ -1.44
SDCBP-208ENST00000520228 UQCRC2P22695 453 aa6.07□□□□□ -1.44
SDCBP-208ENST00000520228 LCN1P31025 176 aa6.07□□□□□ -1.44
SDCBP-208ENST00000520228 GCKP35557 465 aa6.07□□□□□ -1.44
SDCBP-208ENST00000520228 CHI3L1P36222 383 aaPredicted RBP6.07□□□□□ -1.44
SDCBP-208ENST00000520228 POLR2JP52435 117 aaKnown RBP6.07□□□□□ -1.44
SDCBP-208ENST00000520228 SMSP52788 366 aa6.07□□□□□ -1.44
SDCBP-208ENST00000520228 STX1BP61266 288 aa6.07□□□□□ -1.44
SDCBP-208ENST00000520228 SNRPEP62304 92 aaKnown RBP6.07□□□□□ -1.44
SDCBP-208ENST00000520228 KRTAP1-1Q07627 177 aa6.07□□□□□ -1.44
SDCBP-208ENST00000520228 LRRC74AQ0VAA2 488 aa6.07□□□□□ -1.44
SDCBP-208ENST00000520228 STX5Q13190 355 aa6.07□□□□□ -1.44
SDCBP-208ENST00000520228 EIPR1Q53HC9 387 aa6.07□□□□□ -1.44
SDCBP-208ENST00000520228 CCNJQ5T5M9 372 aa6.07□□□□□ -1.44
SDCBP-208ENST00000520228 WLSQ5T9L3 541 aa6.07□□□□□ -1.44
SDCBP-208ENST00000520228 ZNF621Q6ZSS3 439 aa6.07□□□□□ -1.44
SDCBP-208ENST00000520228 GALNT10Q86SR1 603 aa6.07□□□□□ -1.44
SDCBP-208ENST00000520228 YRDCQ86U90 279 aaKnown RBP6.07□□□□□ -1.44
SDCBP-208ENST00000520228 NFE4Q86UQ8 179 aa6.07□□□□□ -1.44
SDCBP-208ENST00000520228 TRIML2Q8N7C3 387 aa6.07□□□□□ -1.44
SDCBP-208ENST00000520228 FAM83FQ8NEG4 500 aaPredicted RBP6.07□□□□□ -1.44
SDCBP-208ENST00000520228 OR4K17Q8NGC6 315 aa6.07□□□□□ -1.44
SDCBP-208ENST00000520228 OR4C3Q8NH37 302 aa6.07□□□□□ -1.44
SDCBP-208ENST00000520228 DTNBP1Q96EV8 351 aa6.07□□□□□ -1.44
SDCBP-208ENST00000520228 THOC1Q96FV9 657 aaKnown RBP6.07□□□□□ -1.44
SDCBP-208ENST00000520228 ZNF582Q96NG8 517 aaPredicted RBP6.07□□□□□ -1.44
SDCBP-208ENST00000520228 OR7D2Q96RA2 312 aa6.07□□□□□ -1.44
SDCBP-208ENST00000520228 PANX1Q96RD7 426 aa6.07□□□□□ -1.44
SDCBP-208ENST00000520228 EBF4Q9BQW3 602 aa6.07□□□□□ -1.44
SDCBP-208ENST00000520228 CCDC28BQ9BUN5 200 aa6.07□□□□□ -1.44
SDCBP-208ENST00000520228 HHATLQ9HCP6 504 aa6.07□□□□□ -1.44
SDCBP-208ENST00000520228 MED4Q9NPJ6 270 aa6.07□□□□□ -1.44
SDCBP-208ENST00000520228 UBQLN4Q9NRR5 601 aa6.07□□□□□ -1.44
SDCBP-208ENST00000520228 PNPLA3Q9NST1 481 aa6.07□□□□□ -1.44
SDCBP-208ENST00000520228 ZFP57Q9NU63 452 aa6.07□□□□□ -1.44
SDCBP-208ENST00000520228 SPRR3Q9UBC9 169 aa6.07□□□□□ -1.44
SDCBP-208ENST00000520228 CRNNQ9UBG3 495 aaPredicted RBP6.07□□□□□ -1.44
SDCBP-208ENST00000520228 SLC6A5Q9Y345 797 aa6.07□□□□□ -1.44
SDCBP-208ENST00000520228 KCNE3Q9Y6H6 103 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms