RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 RAI1Q7Z5J4 1906 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P46-201ENST00000520062 KLF8O95600 359 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P46-201ENST00000520062 C6orf47O95873 294 aa3.69□□□□□ -1.82
HMGB1P46-201ENST00000520062 ACTL6AO96019 429 aa3.69□□□□□ -1.82
HMGB1P46-201ENST00000520062 SERPINA5P05154 406 aa3.69□□□□□ -1.82
HMGB1P46-201ENST00000520062 POLR2MP0CAP2 368 aa3.69□□□□□ -1.82
HMGB1P46-201ENST00000520062 SMIM10L1P0DMW3 83 aa3.69□□□□□ -1.82
HMGB1P46-201ENST00000520062 RBMXP38159 391 aaKnown RBP3.69□□□□□ -1.82
HMGB1P46-201ENST00000520062 SLC26A3P40879 764 aa3.69□□□□□ -1.82
HMGB1P46-201ENST00000520062 FGF8P55075 233 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P46-201ENST00000520062 GNB2P62879 340 aa3.69□□□□□ -1.82
HMGB1P46-201ENST00000520062 DAZ2Q13117 558 aaKnown RBP3.69□□□□□ -1.82
HMGB1P46-201ENST00000520062 ILKQ13418 452 aa3.69□□□□□ -1.82
HMGB1P46-201ENST00000520062 SGCAQ16586 387 aa3.69□□□□□ -1.82
HMGB1P46-201ENST00000520062 HADHQ16836 314 aaKnown RBP3.69□□□□□ -1.82
HMGB1P46-201ENST00000520062 RNF212Q495C1 297 aa3.69□□□□□ -1.82
HMGB1P46-201ENST00000520062 CAVIN4Q5BKX8 364 aa3.69□□□□□ -1.82
HMGB1P46-201ENST00000520062 SOHLH1Q5JUK2 328 aa3.69□□□□□ -1.82
HMGB1P46-201ENST00000520062 PLCXD3Q63HM9 321 aa3.69□□□□□ -1.82
HMGB1P46-201ENST00000520062 STUMQ69YW2 141 aa3.69□□□□□ -1.82
HMGB1P46-201ENST00000520062 TMEM179Q6ZVK1 233 aa3.69□□□□□ -1.82
HMGB1P46-201ENST00000520062 ZNF584Q8IVC4 421 aa3.69□□□□□ -1.82
HMGB1P46-201ENST00000520062 TTC29Q8NA56 475 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P46-201ENST00000520062 SUMF2Q8NBJ7 301 aa3.69□□□□□ -1.82
HMGB1P46-201ENST00000520062 GPX8Q8TED1 209 aa3.69□□□□□ -1.82
HMGB1P46-201ENST00000520062 CAPSLQ8WWF8 208 aa3.69□□□□□ -1.82
HMGB1P46-201ENST00000520062 PHYHIPLQ96FC7 376 aa3.69□□□□□ -1.82
HMGB1P46-201ENST00000520062 DUS3LQ96G46 650 aaKnown RBP3.69□□□□□ -1.82
HMGB1P46-201ENST00000520062 SMIM10Q96HG1 83 aa3.69□□□□□ -1.82
HMGB1P46-201ENST00000520062 PRRC1Q96M27 445 aa3.69□□□□□ -1.82
HMGB1P46-201ENST00000520062 P2RX4Q99571 388 aa3.69□□□□□ -1.82
HMGB1P46-201ENST00000520062 CCNB1IP1Q9NPC3 277 aa3.69□□□□□ -1.82
HMGB1P46-201ENST00000520062 DAZ3Q9NR90 486 aaKnown RBP3.69□□□□□ -1.82
HMGB1P46-201ENST00000520062 IL17CQ9P0M4 197 aa3.69□□□□□ -1.82
HMGB1P46-201ENST00000520062 LYRM9A8MSI8 78 aa3.68□□□□□ -1.82
HMGB1P46-201ENST00000520062 XKRYO14609 159 aa3.68□□□□□ -1.82
HMGB1P46-201ENST00000520062 AKR7A2O43488 359 aa3.68□□□□□ -1.82
HMGB1P46-201ENST00000520062 GIPP09681 153 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P46-201ENST00000520062 FOLR1P15328 257 aa3.68□□□□□ -1.82
HMGB1P46-201ENST00000520062 CTRLP40313 264 aa3.68□□□□□ -1.82
HMGB1P46-201ENST00000520062 CDKN1BP46527 198 aa3.68□□□□□ -1.82
HMGB1P46-201ENST00000520062 WNT4P56705 351 aa3.68□□□□□ -1.82
HMGB1P46-201ENST00000520062 CLDN18P56856 261 aa3.68□□□□□ -1.82
HMGB1P46-201ENST00000520062 RPS21P63220 83 aaKnown RBP3.68□□□□□ -1.82
HMGB1P46-201ENST00000520062 DOC2AQ14183 400 aa3.68□□□□□ -1.82
HMGB1P46-201ENST00000520062 ZNF79Q15937 498 aa3.68□□□□□ -1.82
HMGB1P46-201ENST00000520062 ZNF630Q2M218 657 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P46-201ENST00000520062 TTC19Q6DKK2 380 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P46-201ENST00000520062 FRMPD2BQ6IN97 320 aa3.68□□□□□ -1.82
HMGB1P46-201ENST00000520062 LCN12Q6JVE5 192 aa3.68□□□□□ -1.82
HMGB1P46-201ENST00000520062 SPESP1Q6UW49 350 aa3.68□□□□□ -1.82
HMGB1P46-201ENST00000520062 ANGPTL8Q6UXH0 198 aa3.68□□□□□ -1.82
HMGB1P46-201ENST00000520062 ACP7Q6ZNF0 438 aa3.68□□□□□ -1.82
HMGB1P46-201ENST00000520062 CMC1Q7Z7K0 106 aa3.68□□□□□ -1.82
HMGB1P46-201ENST00000520062 CMTM1Q8IZ96 169 aa3.68□□□□□ -1.82
HMGB1P46-201ENST00000520062 JAGN1Q8N5M9 183 aa3.68□□□□□ -1.82
HMGB1P46-201ENST00000520062 PRELID2Q8N945 189 aa3.68□□□□□ -1.82
HMGB1P46-201ENST00000520062 OR6X1Q8NH79 312 aa3.68□□□□□ -1.82
HMGB1P46-201ENST00000520062 LYPD6BQ8NI32 183 aa3.68□□□□□ -1.82
HMGB1P46-201ENST00000520062 AURKBQ96GD4 344 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P46-201ENST00000520062 JSRP1Q96MG2 331 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P46-201ENST00000520062 CTPS2Q9NRF8 586 aa3.68□□□□□ -1.82
HMGB1P46-201ENST00000520062 PLSCR3Q9NRY6 295 aa3.68□□□□□ -1.82
HMGB1P46-201ENST00000520062 ADAM22Q9P0K1 906 aa3.68□□□□□ -1.82
HMGB1P46-201ENST00000520062 NUFIP1Q9UHK0 495 aaKnown RBP3.68□□□□□ -1.82
HMGB1P46-201ENST00000520062 SAR1BQ9Y6B6 198 aa3.68□□□□□ -1.82
HMGB1P46-201ENST00000520062 RLFQ13129 1914 aa3.68□□□□□ -1.82
HMGB1P46-201ENST00000520062 ZNF816-ZNF321PA0A0X1KG74 233 aa3.67□□□□□ -1.82
HMGB1P46-201ENST00000520062 H7C0C1 242 aa3.67□□□□□ -1.82
HMGB1P46-201ENST00000520062 TRDMT1O14717 391 aaKnown RBP3.67□□□□□ -1.82
HMGB1P46-201ENST00000520062 SCAMP2O15127 329 aaKnown RBP3.67□□□□□ -1.82
HMGB1P46-201ENST00000520062 TNFSF13O75888 250 aa3.67□□□□□ -1.82
HMGB1P46-201ENST00000520062 IGHV4-34P06331 123 aa3.67□□□□□ -1.82
HMGB1P46-201ENST00000520062 PLEKP08567 350 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P46-201ENST00000520062 TNFSF9P41273 254 aa3.67□□□□□ -1.82
HMGB1P46-201ENST00000520062 SLC25A11Q02978 314 aaKnown RBP3.67□□□□□ -1.82
HMGB1P46-201ENST00000520062 TWF1Q12792 350 aa3.67□□□□□ -1.82
HMGB1P46-201ENST00000520062 RFX4Q33E94 735 aa3.67□□□□□ -1.82
HMGB1P46-201ENST00000520062 CAMK2N1Q7Z7J9 78 aa3.67□□□□□ -1.82
HMGB1P46-201ENST00000520062 FAM71E2Q8N5Q1 922 aa3.67□□□□□ -1.82
HMGB1P46-201ENST00000520062 C8orf31Q8N9H6 132 aa3.67□□□□□ -1.82
HMGB1P46-201ENST00000520062 DCAF4L2Q8NA75 395 aa3.67□□□□□ -1.82
HMGB1P46-201ENST00000520062 LINC01555Q8NAE3 123 aa3.67□□□□□ -1.82
HMGB1P46-201ENST00000520062 OR52K1Q8NGK4 314 aa3.67□□□□□ -1.82
HMGB1P46-201ENST00000520062 OR9G4Q8NGQ1 327 aa3.67□□□□□ -1.82
HMGB1P46-201ENST00000520062 OR5B3Q8NH48 314 aa3.67□□□□□ -1.82
HMGB1P46-201ENST00000520062 GEMIN6Q8WXD5 167 aaKnown RBP3.67□□□□□ -1.82
HMGB1P46-201ENST00000520062 MYDGFQ969H8 173 aa3.67□□□□□ -1.82
HMGB1P46-201ENST00000520062 OR2M2Q96R28 347 aa3.67□□□□□ -1.82
HMGB1P46-201ENST00000520062 NRTNQ99748 197 aa3.67□□□□□ -1.82
HMGB1P46-201ENST00000520062 BCL7BQ9BQE9 202 aa3.67□□□□□ -1.82
HMGB1P46-201ENST00000520062 ZYG11BQ9C0D3 744 aa3.67□□□□□ -1.82
HMGB1P46-201ENST00000520062 ACTR3CQ9C0K3 210 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P46-201ENST00000520062 RPF2Q9H7B2 306 aaKnown RBP3.67□□□□□ -1.82
HMGB1P46-201ENST00000520062 NANOGQ9H9S0 305 aa3.67□□□□□ -1.82
HMGB1P46-201ENST00000520062 MAPK8IP3Q9UPT6 1336 aa3.67□□□□□ -1.82
HMGB1P46-201ENST00000520062 ERI2A8K979 691 aaKnown RBP3.66□□□□□ -1.82
HMGB1P46-201ENST00000520062 F6UB75 175 aa3.66□□□□□ -1.82
HMGB1P46-201ENST00000520062 CLDN11O75508 207 aa3.66□□□□□ -1.82
HMGB1P46-201ENST00000520062 MOSP00540 346 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms