RNA–Protein interactions for RNA: ENST00000517921.1

PABPC1-203, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 885 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-203ENST00000517921 LYPD4Q6UWN0 246 aa9.38□□□□□ -0.91
PABPC1-203ENST00000517921 KCTD8Q6ZWB6 473 aa9.38□□□□□ -0.91
PABPC1-203ENST00000517921 SVOPQ8N4V2 548 aa9.38□□□□□ -0.91
PABPC1-203ENST00000517921 CISD2Q8N5K1 135 aaKnown RBP9.38□□□□□ -0.91
PABPC1-203ENST00000517921 TEX19Q8NA77 164 aa9.38□□□□□ -0.91
PABPC1-203ENST00000517921 POMGNT2Q8NAT1 580 aa9.38□□□□□ -0.91
PABPC1-203ENST00000517921 OR5M9Q8NGP3 310 aa9.38□□□□□ -0.91
PABPC1-203ENST00000517921 FAR1Q8WVX9 515 aa9.38□□□□□ -0.91
PABPC1-203ENST00000517921 TMEM54Q969K7 222 aa9.38□□□□□ -0.91
PABPC1-203ENST00000517921 ZNF775Q96BV0 537 aaPredicted RBP9.38□□□□□ -0.91
PABPC1-203ENST00000517921 TMEM80Q96HE8 168 aa9.38□□□□□ -0.91
PABPC1-203ENST00000517921 CNN2Q99439 309 aaKnown RBP9.38□□□□□ -0.91
PABPC1-203ENST00000517921 SLX1AQ9BQ83 275 aa9.38□□□□□ -0.91
PABPC1-203ENST00000517921 JAM3Q9BX67 310 aa9.38□□□□□ -0.91
PABPC1-203ENST00000517921 PRRG4Q9BZD6 226 aa9.38□□□□□ -0.91
PABPC1-203ENST00000517921 MARCH7Q9H992 704 aa9.38□□□□□ -0.91
PABPC1-203ENST00000517921 RNF122Q9H9V4 155 aa9.38□□□□□ -0.91
PABPC1-203ENST00000517921 BCO1Q9HAY6 547 aa9.38□□□□□ -0.91
PABPC1-203ENST00000517921 SRA1Q9HD15 236 aaKnown RBP9.38□□□□□ -0.91
PABPC1-203ENST00000517921 FOXD3Q9UJU5 478 aaPredicted RBP9.38□□□□□ -0.91
PABPC1-203ENST00000517921 PCDHGB1Q9Y5G3 927 aa9.38□□□□□ -0.91
PABPC1-203ENST00000517921 SNX5Q9Y5X3 404 aa9.38□□□□□ -0.91
PABPC1-203ENST00000517921 ZNF724A8MTY0 619 aa9.37□□□□□ -0.91
PABPC1-203ENST00000517921 SELENOFO60613 162 aa9.37□□□□□ -0.91
PABPC1-203ENST00000517921 KHDRBS3O75525 346 aaKnown RBP9.37□□□□□ -0.91
PABPC1-203ENST00000517921 GPANK1O95872 356 aa9.37□□□□□ -0.91
PABPC1-203ENST00000517921 PTHP01270 115 aa9.37□□□□□ -0.91
PABPC1-203ENST00000517921 GAAP10253 952 aa9.37□□□□□ -0.91
PABPC1-203ENST00000517921 FCGR2AP12318 317 aa9.37□□□□□ -0.91
PABPC1-203ENST00000517921 DCKP27707 260 aa9.37□□□□□ -0.91
PABPC1-203ENST00000517921 PTGS2P35354 604 aa9.37□□□□□ -0.91
PABPC1-203ENST00000517921 NAA10P41227 235 aaPredicted RBP9.37□□□□□ -0.91
PABPC1-203ENST00000517921 ALDH3B2P48448 385 aa9.37□□□□□ -0.91
PABPC1-203ENST00000517921 CSNK1A1P48729 337 aa9.37□□□□□ -0.91
PABPC1-203ENST00000517921 ZNF133P52736 654 aaPredicted RBP9.37□□□□□ -0.91
PABPC1-203ENST00000517921 NR1H2P55055 460 aa9.37□□□□□ -0.91
PABPC1-203ENST00000517921 EMX1Q04741 257 aaPredicted RBP9.37□□□□□ -0.91
PABPC1-203ENST00000517921 KLRB1Q12918 225 aa9.37□□□□□ -0.91
PABPC1-203ENST00000517921 RNPS1Q15287 305 aaKnown RBP9.37□□□□□ -0.91
PABPC1-203ENST00000517921 ACSF3Q4G176 576 aaPredicted RBP9.37□□□□□ -0.91
PABPC1-203ENST00000517921 PHYHD1Q5SRE7 291 aa9.37□□□□□ -0.91
PABPC1-203ENST00000517921 THEM4Q5T1C6 240 aa9.37□□□□□ -0.91
PABPC1-203ENST00000517921 RNLSQ5VYX0 342 aa9.37□□□□□ -0.91
PABPC1-203ENST00000517921 DNM1P34Q6PK57 102 aa9.37□□□□□ -0.91
PABPC1-203ENST00000517921 SLC25A47Q6Q0C1 308 aa9.37□□□□□ -0.91
PABPC1-203ENST00000517921 TIGD4Q8IY51 512 aa9.37□□□□□ -0.91
PABPC1-203ENST00000517921 ZNF511Q8NB15 262 aa9.37□□□□□ -0.91
PABPC1-203ENST00000517921 FNDC8Q8TC99 324 aa9.37□□□□□ -0.91
PABPC1-203ENST00000517921 MCHR2Q969V1 340 aa9.37□□□□□ -0.91
PABPC1-203ENST00000517921 SNRNP40Q96DI7 357 aaKnown RBP9.37□□□□□ -0.91
PABPC1-203ENST00000517921 FOXN4Q96NZ1 517 aa9.37□□□□□ -0.91
PABPC1-203ENST00000517921 ZNF649Q9BS31 505 aa9.37□□□□□ -0.91
PABPC1-203ENST00000517921 CDCA4Q9BXL8 241 aa9.37□□□□□ -0.91
PABPC1-203ENST00000517921 RERGLQ9H628 205 aa9.37□□□□□ -0.91
PABPC1-203ENST00000517921 ACOT13Q9NPJ3 140 aa9.37□□□□□ -0.91
PABPC1-203ENST00000517921 GLTPQ9NZD2 209 aa9.37□□□□□ -0.91
PABPC1-203ENST00000517921 EMC3Q9P0I2 261 aa9.37□□□□□ -0.91
PABPC1-203ENST00000517921 CLEC4AQ9UMR7 237 aa9.37□□□□□ -0.91
PABPC1-203ENST00000517921 COA3Q9Y2R0 106 aaPredicted RBP9.37□□□□□ -0.91
PABPC1-203ENST00000517921 EXOSC1Q9Y3B2 195 aaKnown RBP9.37□□□□□ -0.91
PABPC1-203ENST00000517921 TVP23AA6NH52 213 aa9.36□□□□□ -0.91
PABPC1-203ENST00000517921 AHRRA9YTQ3 701 aa9.36□□□□□ -0.91
PABPC1-203ENST00000517921 PYCARD-AS1I3L0S3 204 aa9.36□□□□□ -0.91
PABPC1-203ENST00000517921 GPR171O14626 319 aa9.36□□□□□ -0.91
PABPC1-203ENST00000517921 SLC43A1O75387 559 aa9.36□□□□□ -0.91
PABPC1-203ENST00000517921 YES1P07947 543 aa9.36□□□□□ -0.91
PABPC1-203ENST00000517921 LIMS3P0CW19 117 aa9.36□□□□□ -0.91
PABPC1-203ENST00000517921 LIMS4P0CW20 117 aa9.36□□□□□ -0.91
PABPC1-203ENST00000517921 PSKH1P11801 424 aa9.36□□□□□ -0.91
PABPC1-203ENST00000517921 NR2C1P13056 603 aa9.36□□□□□ -0.91
PABPC1-203ENST00000517921 JUNBP17275 347 aaPredicted RBP9.36□□□□□ -0.91
PABPC1-203ENST00000517921 EDNRAP25101 427 aa9.36□□□□□ -0.91
PABPC1-203ENST00000517921 AGTR1P30556 359 aa9.36□□□□□ -0.91
PABPC1-203ENST00000517921 ATP6V1E1P36543 226 aa9.36□□□□□ -0.91
PABPC1-203ENST00000517921 ETV1P50549 477 aa9.36□□□□□ -0.91
PABPC1-203ENST00000517921 BLVRAP53004 296 aa9.36□□□□□ -0.91
PABPC1-203ENST00000517921 DOC2BQ14184 412 aa9.36□□□□□ -0.91
PABPC1-203ENST00000517921 GUSBP1Q15486 140 aa9.36□□□□□ -0.91
PABPC1-203ENST00000517921 NEDD8Q15843 81 aa9.36□□□□□ -0.91
PABPC1-203ENST00000517921 C10orf128Q5T292 105 aa9.36□□□□□ -0.91
PABPC1-203ENST00000517921 LRFN4Q6PJG9 635 aa9.36□□□□□ -0.91
PABPC1-203ENST00000517921 AAED1Q7RTV5 226 aa9.36□□□□□ -0.91
PABPC1-203ENST00000517921 P4HA3Q7Z4N8 544 aa9.36□□□□□ -0.91
PABPC1-203ENST00000517921 CD163Q86VB7 1156 aa9.36□□□□□ -0.91
PABPC1-203ENST00000517921 TUSC5Q8IXB3 177 aa9.36□□□□□ -0.91
PABPC1-203ENST00000517921 SLC35F2Q8IXU6 374 aa9.36□□□□□ -0.91
PABPC1-203ENST00000517921 C20orf196Q8IYI0 205 aa9.36□□□□□ -0.91
PABPC1-203ENST00000517921 OR6N1Q8NGY5 312 aa9.36□□□□□ -0.91
PABPC1-203ENST00000517921 NSMAFQ92636 917 aa9.36□□□□□ -0.91
PABPC1-203ENST00000517921 MUL1Q969V5 352 aa9.36□□□□□ -0.91
PABPC1-203ENST00000517921 RBP7Q96R05 134 aa9.36□□□□□ -0.91
PABPC1-203ENST00000517921 TRIB1Q96RU8 372 aa9.36□□□□□ -0.91
PABPC1-203ENST00000517921 CALHM2Q9HA72 323 aa9.36□□□□□ -0.91
PABPC1-203ENST00000517921 GP6Q9HCN6 339 aa9.36□□□□□ -0.91
PABPC1-203ENST00000517921 ASF1BQ9NVP2 202 aa9.36□□□□□ -0.91
PABPC1-203ENST00000517921 MRPL22Q9NWU5 206 aaKnown RBP9.36□□□□□ -0.91
PABPC1-203ENST00000517921 CLEC2DQ9UHP7 191 aa9.36□□□□□ -0.91
PABPC1-203ENST00000517921 COPS3Q9UNS2 423 aa9.36□□□□□ -0.91
PABPC1-203ENST00000517921 NOSIPQ9Y314 301 aaKnown RBP9.36□□□□□ -0.91
PABPC1-203ENST00000517921 LSM2Q9Y333 95 aaKnown RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms