RNA–Protein interactions for RNA: ENST00000517625.5

SKP1-203, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 3 BASIC

Gene SKP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-203ENST00000517625 KCNG3Q8TAE7 436 aa1.85□□□□□ -2.11
SKP1-203ENST00000517625 PLPPR1Q8TBJ4 325 aa1.85□□□□□ -2.11
SKP1-203ENST00000517625 CXorf40AQ8TE69 158 aa1.85□□□□□ -2.11
SKP1-203ENST00000517625 ZFP90Q8TF47 636 aa1.85□□□□□ -2.11
SKP1-203ENST00000517625 MED8Q96G25 268 aa1.85□□□□□ -2.11
SKP1-203ENST00000517625 BMFQ96LC9 184 aa1.85□□□□□ -2.11
SKP1-203ENST00000517625 WFIKKN1Q96NZ8 548 aa1.85□□□□□ -2.11
SKP1-203ENST00000517625 METTL7AQ9H8H3 244 aa1.85□□□□□ -2.11
SKP1-203ENST00000517625 NOX3Q9HBY0 568 aa1.85□□□□□ -2.11
SKP1-203ENST00000517625 SLCO1B3Q9NPD5 702 aa1.85□□□□□ -2.11
SKP1-203ENST00000517625 CYTL1Q9NRR1 136 aa1.85□□□□□ -2.11
SKP1-203ENST00000517625 ZNF629Q9UEG4 869 aaPredicted RBP1.85□□□□□ -2.11
SKP1-203ENST00000517625 HPCAL4Q9UM19 191 aa1.85□□□□□ -2.11
SKP1-203ENST00000517625 RP1L1Q8IWN7 2480 aaPredicted RBP1.85□□□□□ -2.11
SKP1-203ENST00000517625 RLFQ13129 1914 aa1.85□□□□□ -2.11
SKP1-203ENST00000517625 HMCN1Q96RW7 5635 aa1.85□□□□□ -2.11
SKP1-203ENST00000517625 CEMIPQ8WUJ3 1361 aa1.85□□□□□ -2.11
SKP1-203ENST00000517625 IGHV3-74A0A0B4J1X5 117 aa1.84□□□□□ -2.11
SKP1-203ENST00000517625 IGHV5-51A0A0C4DH38 117 aa1.84□□□□□ -2.11
SKP1-203ENST00000517625 XKRY2A2RUG3 117 aa1.84□□□□□ -2.11
SKP1-203ENST00000517625 ANKRD63C9JTQ0 380 aa1.84□□□□□ -2.11
SKP1-203ENST00000517625 INS-IGF2F8WCM5 200 aa1.84□□□□□ -2.11
SKP1-203ENST00000517625 H0YHG0 523 aa1.84□□□□□ -2.11
SKP1-203ENST00000517625 CD5LO43866 347 aa1.84□□□□□ -2.11
SKP1-203ENST00000517625 CCNB1P14635 433 aa1.84□□□□□ -2.11
SKP1-203ENST00000517625 NAMPTP43490 491 aa1.84□□□□□ -2.11
SKP1-203ENST00000517625 RORCP51449 518 aa1.84□□□□□ -2.11
SKP1-203ENST00000517625 CCNHP51946 323 aaPredicted RBP1.84□□□□□ -2.11
SKP1-203ENST00000517625 NCBP2P52298 156 aaKnown RBP eCLIP1.84□□□□□ -2.11
SKP1-203ENST00000517625 YWHAGP61981 247 aaKnown RBP eCLIP1.84□□□□□ -2.11
SKP1-203ENST00000517625 ADARB1P78563 741 aaKnown RBP1.84□□□□□ -2.11
SKP1-203ENST00000517625 REG3AQ06141 175 aa1.84□□□□□ -2.11
SKP1-203ENST00000517625 LRRC74AQ0VAA2 488 aa1.84□□□□□ -2.11
SKP1-203ENST00000517625 MADCAM1Q13477 382 aa1.84□□□□□ -2.11
SKP1-203ENST00000517625 EIF4EBP1Q13541 118 aaPredicted RBP1.84□□□□□ -2.11
SKP1-203ENST00000517625 RSPO1Q2MKA7 263 aaPredicted RBP1.84□□□□□ -2.11
SKP1-203ENST00000517625 MAJINQ3KP22 176 aa1.84□□□□□ -2.11
SKP1-203ENST00000517625 ANKRD22Q5VYY1 191 aa1.84□□□□□ -2.11
SKP1-203ENST00000517625 OR52W1Q6IF63 320 aa1.84□□□□□ -2.11
SKP1-203ENST00000517625 RNASEKQ6P5S7 137 aaKnown RBP1.84□□□□□ -2.11
SKP1-203ENST00000517625 DUX4L9Q6RFH8 374 aaPredicted RBP1.84□□□□□ -2.11
SKP1-203ENST00000517625 TEX43Q6ZNM6 134 aa1.84□□□□□ -2.11
SKP1-203ENST00000517625 ZNF493Q6ZR52 646 aa1.84□□□□□ -2.11
SKP1-203ENST00000517625 FAM92BQ6ZTR7 304 aa1.84□□□□□ -2.11
SKP1-203ENST00000517625 STPG2Q8N412 459 aa1.84□□□□□ -2.11
SKP1-203ENST00000517625 LIX1Q8N485 282 aa1.84□□□□□ -2.11
SKP1-203ENST00000517625 MS4A15Q8N5U1 240 aa1.84□□□□□ -2.11
SKP1-203ENST00000517625 EID2Q8N6I1 236 aa1.84□□□□□ -2.11
SKP1-203ENST00000517625 SDR9C7Q8NEX9 313 aa1.84□□□□□ -2.11
SKP1-203ENST00000517625 NOXO1Q8NFA2 376 aa1.84□□□□□ -2.11
SKP1-203ENST00000517625 B3GNT7Q8NFL0 401 aa1.84□□□□□ -2.11
SKP1-203ENST00000517625 OR2L8Q8NGY9 312 aa1.84□□□□□ -2.11
SKP1-203ENST00000517625 SLC22A8Q8TCC7 542 aa1.84□□□□□ -2.11
SKP1-203ENST00000517625 CREB3L1Q96BA8 519 aa1.84□□□□□ -2.11
SKP1-203ENST00000517625 RASD2Q96D21 266 aa1.84□□□□□ -2.11
SKP1-203ENST00000517625 OR2A5Q96R48 311 aa1.84□□□□□ -2.11
SKP1-203ENST00000517625 TCHPQ9BT92 498 aa1.84□□□□□ -2.11
SKP1-203ENST00000517625 KRTAP4-3Q9BYR4 195 aa1.84□□□□□ -2.11
SKP1-203ENST00000517625 SLC40A1Q9NP59 571 aa1.84□□□□□ -2.11
SKP1-203ENST00000517625 NECAP2Q9NVZ3 263 aa1.84□□□□□ -2.11
SKP1-203ENST00000517625 WDR62O43379 1518 aa1.84□□□□□ -2.11
SKP1-203ENST00000517625 MAPK8IP3Q9UPT6 1336 aa1.84□□□□□ -2.12
SKP1-203ENST00000517625 HEATR9A2RTY3 570 aa1.83□□□□□ -2.12
SKP1-203ENST00000517625 C11orf94C9JXX5 98 aa1.83□□□□□ -2.12
SKP1-203ENST00000517625 CIB2O75838 187 aa1.83□□□□□ -2.12
SKP1-203ENST00000517625 SLC25A14O95258 325 aaPredicted RBP1.83□□□□□ -2.12
SKP1-203ENST00000517625 FOLR1P15328 257 aa1.83□□□□□ -2.12
SKP1-203ENST00000517625 PSMC3P17980 439 aa1.83□□□□□ -2.12
SKP1-203ENST00000517625 CHMLP26374 656 aa1.83□□□□□ -2.12
SKP1-203ENST00000517625 HRH1P35367 487 aa1.83□□□□□ -2.12
SKP1-203ENST00000517625 RPS9P46781 194 aaKnown RBP1.83□□□□□ -2.12
SKP1-203ENST00000517625 ACLYP53396 1101 aa1.83□□□□□ -2.12
SKP1-203ENST00000517625 ARG2P78540 354 aa1.83□□□□□ -2.12
SKP1-203ENST00000517625 HMGN5P82970 282 aaKnown RBP1.83□□□□□ -2.12
SKP1-203ENST00000517625 ERCC8Q13216 396 aa1.83□□□□□ -2.12
SKP1-203ENST00000517625 IDI1Q13907 227 aa1.83□□□□□ -2.12
SKP1-203ENST00000517625 GINS1Q14691 196 aa1.83□□□□□ -2.12
SKP1-203ENST00000517625 PON3Q15166 354 aa1.83□□□□□ -2.12
SKP1-203ENST00000517625 C5orf47Q569G3 176 aa1.83□□□□□ -2.12
SKP1-203ENST00000517625 BHLHA15Q7RTS1 189 aaPredicted RBP1.83□□□□□ -2.12
SKP1-203ENST00000517625 OAFQ86UD1 273 aa1.83□□□□□ -2.12
SKP1-203ENST00000517625 FAM228AQ86W67 206 aa1.83□□□□□ -2.12
SKP1-203ENST00000517625 FAM86B1Q8N7N1 296 aa1.83□□□□□ -2.12
SKP1-203ENST00000517625 C15orf56Q8N910 161 aa1.83□□□□□ -2.12
SKP1-203ENST00000517625 OR7G2Q8NG99 324 aa1.83□□□□□ -2.12
SKP1-203ENST00000517625 OR4C5Q8NGB2 326 aa1.83□□□□□ -2.12
SKP1-203ENST00000517625 FAM3DQ96BQ1 224 aa1.83□□□□□ -2.12
SKP1-203ENST00000517625 ZNF578Q96N58 590 aaPredicted RBP1.83□□□□□ -2.12
SKP1-203ENST00000517625 RACGAP1Q9H0H5 632 aa1.83□□□□□ -2.12
SKP1-203ENST00000517625 RPF2Q9H7B2 306 aaKnown RBP1.83□□□□□ -2.12
SKP1-203ENST00000517625 ING4Q9UNL4 249 aa1.83□□□□□ -2.12
SKP1-203ENST00000517625 GOLT1BQ9Y3E0 138 aa1.83□□□□□ -2.12
SKP1-203ENST00000517625 CSDC2Q9Y534 153 aaKnown RBP1.83□□□□□ -2.12
SKP1-203ENST00000517625 KCNE3Q9Y6H6 103 aa1.83□□□□□ -2.12
SKP1-203ENST00000517625 MN1Q10571 1320 aaPredicted RBP1.83□□□□□ -2.12
SKP1-203ENST00000517625 MTCL1Q9Y4B5 1905 aaKnown RBP1.83□□□□□ -2.12
SKP1-203ENST00000517625 USP47Q96K76 1375 aa1.83□□□□□ -2.12
SKP1-203ENST00000517625 IGLV1-50A0A075B6I6 118 aa1.82□□□□□ -2.12
SKP1-203ENST00000517625 CCDC169A6NNP5 214 aa1.82□□□□□ -2.12
SKP1-203ENST00000517625 UBXN8O00124 270 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms