RNA–Protein interactions for RNA: ENST00000516600.1

SCARNA21.2-201, small Cajal body-specific RNA 21, humanhuman

BASIC

Gene SCARNA21, Length 166 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA21.2-201ENST00000516600 GALNT1Q10472 559 aaPredicted RBP4.55□□□□□ -1.68
SCARNA21.2-201ENST00000516600 CHI3L2Q15782 390 aa4.55□□□□□ -1.68
SCARNA21.2-201ENST00000516600 CPSF6Q16630 551 aaKnown RBP eCLIP4.55□□□□□ -1.68
SCARNA21.2-201ENST00000516600 CDKL4Q5MAI5 379 aa4.55□□□□□ -1.68
SCARNA21.2-201ENST00000516600 MROH9Q5TGP6 573 aa4.55□□□□□ -1.68
SCARNA21.2-201ENST00000516600 FAM45BPQ6NSW5 357 aa4.55□□□□□ -1.68
SCARNA21.2-201ENST00000516600 RNF165Q6ZSG1 346 aa4.55□□□□□ -1.68
SCARNA21.2-201ENST00000516600 C8orf86Q6ZUL3 223 aa4.55□□□□□ -1.68
SCARNA21.2-201ENST00000516600 COMMD6Q7Z4G1 85 aa4.55□□□□□ -1.68
SCARNA21.2-201ENST00000516600 VRK2Q86Y07 508 aa4.55□□□□□ -1.68
SCARNA21.2-201ENST00000516600 OR2L13Q8N349 312 aa4.55□□□□□ -1.68
SCARNA21.2-201ENST00000516600 GPR137CQ8N3F9 429 aa4.55□□□□□ -1.68
SCARNA21.2-201ENST00000516600 RBM15BQ8NDT2 890 aaKnown RBP4.55□□□□□ -1.68
SCARNA21.2-201ENST00000516600 SLC30A7Q8NEW0 376 aa4.55□□□□□ -1.68
SCARNA21.2-201ENST00000516600 FAM45AQ8TCE6 357 aa4.55□□□□□ -1.68
SCARNA21.2-201ENST00000516600 UTP4Q969X6 686 aaKnown RBP4.55□□□□□ -1.68
SCARNA21.2-201ENST00000516600 COQ8BQ96D53 544 aa4.55□□□□□ -1.68
SCARNA21.2-201ENST00000516600 SAMD8Q96LT4 415 aa4.55□□□□□ -1.68
SCARNA21.2-201ENST00000516600 ZNF75AQ96N20 296 aa4.55□□□□□ -1.68
SCARNA21.2-201ENST00000516600 C18orf15Q96N68 181 aa4.55□□□□□ -1.68
SCARNA21.2-201ENST00000516600 TMEM120AQ9BXJ8 343 aa4.55□□□□□ -1.68
SCARNA21.2-201ENST00000516600 PPCSQ9HAB8 311 aa4.55□□□□□ -1.68
SCARNA21.2-201ENST00000516600 GPR35Q9HC97 309 aa4.55□□□□□ -1.68
SCARNA21.2-201ENST00000516600 MSL2Q9HCI7 577 aa4.55□□□□□ -1.68
SCARNA21.2-201ENST00000516600 SSU72Q9NP77 194 aaKnown RBP4.55□□□□□ -1.68
SCARNA21.2-201ENST00000516600 SLC35C2Q9NQQ7 365 aa4.55□□□□□ -1.68
SCARNA21.2-201ENST00000516600 ARL8BQ9NVJ2 186 aa4.55□□□□□ -1.68
SCARNA21.2-201ENST00000516600 OPTCQ9UBM4 332 aa4.55□□□□□ -1.68
SCARNA21.2-201ENST00000516600 CGGBP1Q9UFW8 167 aaPredicted RBP4.55□□□□□ -1.68
SCARNA21.2-201ENST00000516600 PCDHGB4Q9UN71 923 aa4.55□□□□□ -1.68
SCARNA21.2-201ENST00000516600 A0A0G2JND7 137 aa4.54□□□□□ -1.68
SCARNA21.2-201ENST00000516600 MEGF11A6BM72 1044 aa4.54□□□□□ -1.68
SCARNA21.2-201ENST00000516600 CXorf65A6NEN9 183 aa4.54□□□□□ -1.68
SCARNA21.2-201ENST00000516600 NUPR2A6NF83 97 aa4.54□□□□□ -1.68
SCARNA21.2-201ENST00000516600 CFAP73A6NFT4 308 aa4.54□□□□□ -1.68
SCARNA21.2-201ENST00000516600 PRSS29PA6NIE9 313 aa4.54□□□□□ -1.68
SCARNA21.2-201ENST00000516600 NUDT19A8MXV4 375 aa4.54□□□□□ -1.68
SCARNA21.2-201ENST00000516600 K7EPI3 171 aa4.54□□□□□ -1.68
SCARNA21.2-201ENST00000516600 RNASET2O00584 256 aaKnown RBP4.54□□□□□ -1.68
SCARNA21.2-201ENST00000516600 ANKRD28O15084 1053 aa4.54□□□□□ -1.68
SCARNA21.2-201ENST00000516600 ZNF264O43296 627 aa4.54□□□□□ -1.68
SCARNA21.2-201ENST00000516600 ITM2AO43736 263 aa4.54□□□□□ -1.68
SCARNA21.2-201ENST00000516600 EIF4E2O60573 245 aaKnown RBP4.54□□□□□ -1.68
SCARNA21.2-201ENST00000516600 LYPLA1O75608 230 aaPredicted RBP4.54□□□□□ -1.68
SCARNA21.2-201ENST00000516600 CYP7B1O75881 506 aa4.54□□□□□ -1.68
SCARNA21.2-201ENST00000516600 NKX2-2O95096 273 aa4.54□□□□□ -1.68
SCARNA21.2-201ENST00000516600 UBL3O95164 117 aa4.54□□□□□ -1.68
SCARNA21.2-201ENST00000516600 HSPA4LO95757 839 aa4.54□□□□□ -1.68
SCARNA21.2-201ENST00000516600 AHSGP02765 367 aa4.54□□□□□ -1.68
SCARNA21.2-201ENST00000516600 SERPINA5P05154 406 aa4.54□□□□□ -1.68
SCARNA21.2-201ENST00000516600 JUNP05412 331 aaKnown RBP4.54□□□□□ -1.68
SCARNA21.2-201ENST00000516600 SNRPAP09012 282 aaKnown RBP4.54□□□□□ -1.68
SCARNA21.2-201ENST00000516600 T-ENOLP0DO92 83 aa4.54□□□□□ -1.68
SCARNA21.2-201ENST00000516600 TROVE2P10155 538 aaKnown RBP eCLIP4.54□□□□□ -1.68
SCARNA21.2-201ENST00000516600 KITP10721 976 aa4.54□□□□□ -1.68
SCARNA21.2-201ENST00000516600 UBL4AP11441 157 aa4.54□□□□□ -1.68
SCARNA21.2-201ENST00000516600 CCL2P13500 99 aa4.54□□□□□ -1.68
SCARNA21.2-201ENST00000516600 CCNA2P20248 432 aa4.54□□□□□ -1.68
SCARNA21.2-201ENST00000516600 ATP6V1C1P21283 382 aa4.54□□□□□ -1.68
SCARNA21.2-201ENST00000516600 TACR3P29371 465 aa4.54□□□□□ -1.68
SCARNA21.2-201ENST00000516600 MAGEA3P43357 314 aa4.54□□□□□ -1.68
SCARNA21.2-201ENST00000516600 GTF2A1P52655 376 aaPredicted RBP4.54□□□□□ -1.68
SCARNA21.2-201ENST00000516600 SLC18A1P54219 525 aa4.54□□□□□ -1.68
SCARNA21.2-201ENST00000516600 UCP2P55851 309 aa4.54□□□□□ -1.68
SCARNA21.2-201ENST00000516600 CDK16Q00536 496 aa4.54□□□□□ -1.68
SCARNA21.2-201ENST00000516600 ZNF460Q14592 562 aa4.54□□□□□ -1.68
SCARNA21.2-201ENST00000516600 CNN3Q15417 329 aaKnown RBP4.54□□□□□ -1.68
SCARNA21.2-201ENST00000516600 ZNF718Q3SXZ3 478 aa4.54□□□□□ -1.68
SCARNA21.2-201ENST00000516600 ZNF404Q494X3 552 aa4.54□□□□□ -1.68
SCARNA21.2-201ENST00000516600 CCNJQ5T5M9 372 aa4.54□□□□□ -1.68
SCARNA21.2-201ENST00000516600 ASPHD1Q5U4P2 390 aa4.54□□□□□ -1.68
SCARNA21.2-201ENST00000516600 LIPJQ5W064 366 aa4.54□□□□□ -1.68
SCARNA21.2-201ENST00000516600 LGALS9CQ6DKI2 356 aa4.54□□□□□ -1.68
SCARNA21.2-201ENST00000516600 TMEM225Q6GV28 225 aa4.54□□□□□ -1.68
SCARNA21.2-201ENST00000516600 METAP1DQ6UB28 335 aaPredicted RBP4.54□□□□□ -1.68
SCARNA21.2-201ENST00000516600 DCDC5Q6ZRR9 648 aa4.54□□□□□ -1.68
SCARNA21.2-201ENST00000516600 ZCCHC23Q6ZST2 131 aa4.54□□□□□ -1.68
SCARNA21.2-201ENST00000516600 ASRGL1Q7L266 308 aa4.54□□□□□ -1.68
SCARNA21.2-201ENST00000516600 METTL4Q8N3J2 472 aa4.54□□□□□ -1.68
SCARNA21.2-201ENST00000516600 PAQR4Q8N4S7 273 aaPredicted RBP4.54□□□□□ -1.68
SCARNA21.2-201ENST00000516600 COX18Q8N8Q8 333 aa4.54□□□□□ -1.68
SCARNA21.2-201ENST00000516600 L3MBTL4Q8NA19 623 aa4.54□□□□□ -1.68
SCARNA21.2-201ENST00000516600 PDPRQ8NCN5 879 aa4.54□□□□□ -1.68
SCARNA21.2-201ENST00000516600 OR1J1Q8NGS3 322 aa4.54□□□□□ -1.68
SCARNA21.2-201ENST00000516600 CLHC1Q8NHS4 586 aa4.54□□□□□ -1.68
SCARNA21.2-201ENST00000516600 RORBQ92753 470 aa4.54□□□□□ -1.68
SCARNA21.2-201ENST00000516600 EXT2Q93063 718 aa4.54□□□□□ -1.68
SCARNA21.2-201ENST00000516600 ZNF382Q96SR6 550 aa4.54□□□□□ -1.68
SCARNA21.2-201ENST00000516600 THUMPD3Q9BV44 507 aaKnown RBP4.54□□□□□ -1.68
SCARNA21.2-201ENST00000516600 KRTAP9-2Q9BYQ4 174 aa4.54□□□□□ -1.68
SCARNA21.2-201ENST00000516600 IQCGQ9H095 443 aaKnown RBP4.54□□□□□ -1.68
SCARNA21.2-201ENST00000516600 HIPK2Q9H2X6 1198 aa4.54□□□□□ -1.68
SCARNA21.2-201ENST00000516600 CTPS2Q9NRF8 586 aa4.54□□□□□ -1.68
SCARNA21.2-201ENST00000516600 ACER3Q9NUN7 267 aa4.54□□□□□ -1.68
SCARNA21.2-201ENST00000516600 GIN1Q9NXP7 522 aa4.54□□□□□ -1.68
SCARNA21.2-201ENST00000516600 MARCOQ9UEW3 520 aaPredicted RBP4.54□□□□□ -1.68
SCARNA21.2-201ENST00000516600 EMCNQ9ULC0 261 aa4.54□□□□□ -1.68
SCARNA21.2-201ENST00000516600 ANGPTL3Q9Y5C1 460 aa4.54□□□□□ -1.68
SCARNA21.2-201ENST00000516600 PSAT1Q9Y617 370 aa4.54□□□□□ -1.68
SCARNA21.2-201ENST00000516600 KPTNQ9Y664 436 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms