RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 ZNF84P51523 738 aa8.99□□□□□ -0.97
HMGXB3-205ENST00000514469 MRPS34P82930 218 aaKnown RBP8.99□□□□□ -0.97
HMGXB3-205ENST00000514469 MYBPC1Q00872 1141 aa8.99□□□□□ -0.97
HMGXB3-205ENST00000514469 FMODQ06828 376 aa8.99□□□□□ -0.97
HMGXB3-205ENST00000514469 TAF11Q15544 211 aa8.99□□□□□ -0.97
HMGXB3-205ENST00000514469 SLC36A2Q495M3 483 aa8.99□□□□□ -0.97
HMGXB3-205ENST00000514469 ALG10Q5BKT4 473 aa8.99□□□□□ -0.97
HMGXB3-205ENST00000514469 GKAP1Q5VSY0 366 aaPredicted RBP8.99□□□□□ -0.97
HMGXB3-205ENST00000514469 TMEM53Q6P2H8 277 aa8.99□□□□□ -0.97
HMGXB3-205ENST00000514469 HACD2Q6Y1H2 254 aa8.99□□□□□ -0.97
HMGXB3-205ENST00000514469 CBLL1Q75N03 491 aa8.99□□□□□ -0.97
HMGXB3-205ENST00000514469 CXXC5Q7LFL8 322 aaKnown RBP8.99□□□□□ -0.97
HMGXB3-205ENST00000514469 SLC16A14Q7RTX9 510 aa8.99□□□□□ -0.97
HMGXB3-205ENST00000514469 LRP11Q86VZ4 500 aa8.99□□□□□ -0.97
HMGXB3-205ENST00000514469 TREML1Q86YW5 311 aa8.99□□□□□ -0.97
HMGXB3-205ENST00000514469 ZNF786Q8N393 782 aa8.99□□□□□ -0.97
HMGXB3-205ENST00000514469 PAQR4Q8N4S7 273 aaPredicted RBP8.99□□□□□ -0.97
HMGXB3-205ENST00000514469 SYT14Q8NB59 555 aa8.99□□□□□ -0.97
HMGXB3-205ENST00000514469 SLC30A7Q8NEW0 376 aa8.99□□□□□ -0.97
HMGXB3-205ENST00000514469 GEMIN6Q8WXD5 167 aaKnown RBP8.99□□□□□ -0.97
HMGXB3-205ENST00000514469 HDAC2Q92769 488 aaKnown RBP8.99□□□□□ -0.97
HMGXB3-205ENST00000514469 NABP1Q96AH0 204 aa8.99□□□□□ -0.97
HMGXB3-205ENST00000514469 MSI2Q96DH6 328 aaKnown RBP8.99□□□□□ -0.97
HMGXB3-205ENST00000514469 HSH2DQ96JZ2 352 aa8.99□□□□□ -0.97
HMGXB3-205ENST00000514469 KCNK17Q96T54 332 aa8.99□□□□□ -0.97
HMGXB3-205ENST00000514469 HOPXQ9BPY8 73 aaPredicted RBP8.99□□□□□ -0.97
HMGXB3-205ENST00000514469 SYT3Q9BQG1 590 aa8.99□□□□□ -0.97
HMGXB3-205ENST00000514469 TXNIPQ9H3M7 391 aa8.99□□□□□ -0.97
HMGXB3-205ENST00000514469 TPK1Q9H3S4 243 aa8.99□□□□□ -0.97
HMGXB3-205ENST00000514469 MYEF2Q9P2K5 600 aaKnown RBP8.99□□□□□ -0.97
HMGXB3-205ENST00000514469 ABCD2Q9UBJ2 740 aa8.99□□□□□ -0.97
HMGXB3-205ENST00000514469 LPAR3Q9UBY5 353 aa8.99□□□□□ -0.97
HMGXB3-205ENST00000514469 UGT2A1Q9Y4X1 527 aa8.99□□□□□ -0.97
HMGXB3-205ENST00000514469 SNX13Q9Y5W8 968 aa8.99□□□□□ -0.97
HMGXB3-205ENST00000514469 ARFGEF3Q5TH69 2177 aa8.98□□□□□ -0.97
HMGXB3-205ENST00000514469 IGKV1D-43A0A0B4J1Z2 117 aa8.98□□□□□ -0.97
HMGXB3-205ENST00000514469 SLC22A23A1A5C7 686 aa8.98□□□□□ -0.97
HMGXB3-205ENST00000514469 GMNCA6NCL1 334 aa8.98□□□□□ -0.97
HMGXB3-205ENST00000514469 J3KTA2 159 aa8.98□□□□□ -0.97
HMGXB3-205ENST00000514469 MGRN1O60291 552 aa8.98□□□□□ -0.97
HMGXB3-205ENST00000514469 PRSS23O95084 383 aa8.98□□□□□ -0.97
HMGXB3-205ENST00000514469 ZNF682O95780 498 aa8.98□□□□□ -0.97
HMGXB3-205ENST00000514469 FAM157CP0CG43 387 aa8.98□□□□□ -0.97
HMGXB3-205ENST00000514469 NR2C1P13056 603 aa8.98□□□□□ -0.97
HMGXB3-205ENST00000514469 IFI30P13284 250 aa8.98□□□□□ -0.97
HMGXB3-205ENST00000514469 MAKP20794 623 aa8.98□□□□□ -0.97
HMGXB3-205ENST00000514469 IGFBP5P24593 272 aa8.98□□□□□ -0.97
HMGXB3-205ENST00000514469 IFNA8P32881 189 aa8.98□□□□□ -0.97
HMGXB3-205ENST00000514469 ALDH3B1P43353 468 aa8.98□□□□□ -0.97
HMGXB3-205ENST00000514469 GSK3BP49841 420 aa8.98□□□□□ -0.97
HMGXB3-205ENST00000514469 TOP3AQ13472 1001 aaPredicted RBP8.98□□□□□ -0.97
HMGXB3-205ENST00000514469 FHL1Q13642 323 aa8.98□□□□□ -0.97
HMGXB3-205ENST00000514469 RIN1Q13671 783 aa8.98□□□□□ -0.97
HMGXB3-205ENST00000514469 LAPTM4AQ15012 233 aa8.98□□□□□ -0.97
HMGXB3-205ENST00000514469 TRAM2Q15035 370 aa8.98□□□□□ -0.97
HMGXB3-205ENST00000514469 IQCCQ4KMZ1 466 aa8.98□□□□□ -0.97
HMGXB3-205ENST00000514469 IFI44LQ53G44 452 aa8.98□□□□□ -0.97
HMGXB3-205ENST00000514469 ELFN2Q5R3F8 820 aa8.98□□□□□ -0.97
HMGXB3-205ENST00000514469 FAM166AQ6J272 317 aa8.98□□□□□ -0.97
HMGXB3-205ENST00000514469 PODNL1Q6PEZ8 512 aa8.98□□□□□ -0.97
HMGXB3-205ENST00000514469 LRRC75AQ8NAA5 344 aa8.98□□□□□ -0.97
HMGXB3-205ENST00000514469 FAM156AQ8NDB6 213 aa8.98□□□□□ -0.97
HMGXB3-205ENST00000514469 RBM15BQ8NDT2 890 aaKnown RBP8.98□□□□□ -0.97
HMGXB3-205ENST00000514469 UBASH3BQ8TF42 649 aa8.98□□□□□ -0.97
HMGXB3-205ENST00000514469 TSPAN32Q96QS1 320 aa8.98□□□□□ -0.97
HMGXB3-205ENST00000514469 SOX7Q9BT81 388 aa8.98□□□□□ -0.97
HMGXB3-205ENST00000514469 ALG12Q9BV10 488 aa8.98□□□□□ -0.97
HMGXB3-205ENST00000514469 MYLK2Q9H1R3 596 aa8.98□□□□□ -0.97
HMGXB3-205ENST00000514469 RNF121Q9H920 327 aa8.98□□□□□ -0.97
HMGXB3-205ENST00000514469 EFCAB1Q9HAE3 211 aa8.98□□□□□ -0.97
HMGXB3-205ENST00000514469 SIAEQ9HAT2 523 aa8.98□□□□□ -0.97
HMGXB3-205ENST00000514469 RHCGQ9UBD6 479 aa8.98□□□□□ -0.97
HMGXB3-205ENST00000514469 REV1Q9UBZ9 1251 aa8.98□□□□□ -0.97
HMGXB3-205ENST00000514469 FZR1Q9UM11 496 aa8.98□□□□□ -0.97
HMGXB3-205ENST00000514469 IGLV3-9A0A075B6K5 115 aa8.97□□□□□ -0.97
HMGXB3-205ENST00000514469 TRAV27A0A087WT01 109 aa8.97□□□□□ -0.97
HMGXB3-205ENST00000514469 LOC100289279A0A1B0GTE1 492 aa8.97□□□□□ -0.97
HMGXB3-205ENST00000514469 IQCMA0A1B0GVH7 501 aa8.97□□□□□ -0.97
HMGXB3-205ENST00000514469 NDUFAB1O14561 156 aa8.97□□□□□ -0.97
HMGXB3-205ENST00000514469 GSTA4O15217 222 aa8.97□□□□□ -0.97
HMGXB3-205ENST00000514469 LMX1BO60663 402 aa8.97□□□□□ -0.97
HMGXB3-205ENST00000514469 LILRA1O75019 489 aa8.97□□□□□ -0.97
HMGXB3-205ENST00000514469 SERPINA1P01009 418 aa8.97□□□□□ -0.97
HMGXB3-205ENST00000514469 PTHP01270 115 aa8.97□□□□□ -0.97
HMGXB3-205ENST00000514469 IFNA2P01563 188 aa8.97□□□□□ -0.97
HMGXB3-205ENST00000514469 SAGP10523 405 aaPredicted RBP8.97□□□□□ -0.97
HMGXB3-205ENST00000514469 CCL2P13500 99 aa8.97□□□□□ -0.97
HMGXB3-205ENST00000514469 ZNF250P15622 560 aa8.97□□□□□ -0.97
HMGXB3-205ENST00000514469 CDAP32320 146 aa8.97□□□□□ -0.97
HMGXB3-205ENST00000514469 YAP1P46937 504 aaKnown RBP8.97□□□□□ -0.97
HMGXB3-205ENST00000514469 SLC9A3P48764 834 aa8.97□□□□□ -0.97
HMGXB3-205ENST00000514469 NUDT2P50583 147 aa8.97□□□□□ -0.97
HMGXB3-205ENST00000514469 CHN2P52757 468 aa8.97□□□□□ -0.97
HMGXB3-205ENST00000514469 RPL27P61353 136 aaKnown RBP8.97□□□□□ -0.97
HMGXB3-205ENST00000514469 ERVS71-1P61550 626 aa8.97□□□□□ -0.97
HMGXB3-205ENST00000514469 PRKCDQ05655 676 aa8.97□□□□□ -0.97
HMGXB3-205ENST00000514469 CD47Q08722 323 aa8.97□□□□□ -0.97
HMGXB3-205ENST00000514469 MAD2L1BPQ15013 274 aaPredicted RBP8.97□□□□□ -0.97
HMGXB3-205ENST00000514469 TBC1D28Q2M2D7 210 aa8.97□□□□□ -0.97
HMGXB3-205ENST00000514469 ANKDD1AQ495B1 522 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms