RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 ZFPL1O95159 310 aa13.37□□□□□ -0.27
VCAN-211ENST00000513984 PMS2P2O95744 297 aa13.37□□□□□ -0.27
VCAN-211ENST00000513984 OPN1LWP04000 364 aa13.37□□□□□ -0.27
VCAN-211ENST00000513984 SLC18B1Q6NT16 456 aa13.37□□□□□ -0.27
VCAN-211ENST00000513984 SFXN4Q6P4A7 337 aa13.37□□□□□ -0.27
VCAN-211ENST00000513984 SLC22A16Q86VW1 577 aa13.37□□□□□ -0.27
VCAN-211ENST00000513984 RAB43Q86YS6 212 aa13.37□□□□□ -0.27
VCAN-211ENST00000513984 UEVLDQ8IX04 471 aa13.37□□□□□ -0.27
VCAN-211ENST00000513984 SLC26A10Q8NG04 563 aa13.37□□□□□ -0.27
VCAN-211ENST00000513984 RGP1Q92546 391 aaPredicted RBP13.37□□□□□ -0.27
VCAN-211ENST00000513984 FOXN4Q96NZ1 517 aa13.37□□□□□ -0.27
VCAN-211ENST00000513984 OR14A2Q96R54 314 aa13.37□□□□□ -0.27
VCAN-211ENST00000513984 OR8B4Q96RC9 309 aa13.37□□□□□ -0.27
VCAN-211ENST00000513984 SP140LQ9H930 580 aa13.37□□□□□ -0.27
VCAN-211ENST00000513984 DKKL1Q9UK85 242 aa13.37□□□□□ -0.27
VCAN-211ENST00000513984 COA3Q9Y2R0 106 aaPredicted RBP13.37□□□□□ -0.27
VCAN-211ENST00000513984 PHF3Q92576 2039 aaKnown RBP13.37□□□□□ -0.27
VCAN-211ENST00000513984 LOC102725191A0A1B0GVB3 256 aa13.36□□□□□ -0.27
VCAN-211ENST00000513984 AQP7P3A6NL99 342 aa13.36□□□□□ -0.27
VCAN-211ENST00000513984 TRAF3IP2O43734 574 aaPredicted RBP13.36□□□□□ -0.27
VCAN-211ENST00000513984 RPP14O95059 124 aaKnown RBP13.36□□□□□ -0.27
VCAN-211ENST00000513984 TNFSF15O95150 251 aa13.36□□□□□ -0.27
VCAN-211ENST00000513984 P04436 131 aa13.36□□□□□ -0.27
VCAN-211ENST00000513984 RAB3BP20337 219 aa13.36□□□□□ -0.27
VCAN-211ENST00000513984 THBS2P35442 1172 aa13.36□□□□□ -0.27
VCAN-211ENST00000513984 BIDP55957 195 aa13.36□□□□□ -0.27
VCAN-211ENST00000513984 ADAM8P78325 824 aa13.36□□□□□ -0.27
VCAN-211ENST00000513984 SLC35A1P78382 337 aa13.36□□□□□ -0.27
VCAN-211ENST00000513984 ROM1Q03395 351 aa13.36□□□□□ -0.27
VCAN-211ENST00000513984 FMODQ06828 376 aa13.36□□□□□ -0.27
VCAN-211ENST00000513984 JMJD6Q6NYC1 403 aaPredicted RBP13.36□□□□□ -0.27
VCAN-211ENST00000513984 FDX2Q6P4F2 183 aa13.36□□□□□ -0.27
VCAN-211ENST00000513984 XKRXQ6PP77 449 aa13.36□□□□□ -0.27
VCAN-211ENST00000513984 FAM131AQ6UXB0 335 aa13.36□□□□□ -0.27
VCAN-211ENST00000513984 TMPPEQ6ZT21 453 aa13.36□□□□□ -0.27
VCAN-211ENST00000513984 ZNF454Q8N9F8 522 aa13.36□□□□□ -0.27
VCAN-211ENST00000513984 ADAMTS17Q8TE56 1095 aa13.36□□□□□ -0.27
VCAN-211ENST00000513984 ABTB1Q969K4 478 aaPredicted RBP13.36□□□□□ -0.27
VCAN-211ENST00000513984 OXGR1Q96P68 337 aa13.36□□□□□ -0.27
VCAN-211ENST00000513984 MRPL13Q9BYD1 178 aaKnown RBP13.36□□□□□ -0.27
VCAN-211ENST00000513984 SLCO1C1Q9NYB5 712 aa13.36□□□□□ -0.27
VCAN-211ENST00000513984 FRRS1LQ9P0K9 344 aa13.36□□□□□ -0.27
VCAN-211ENST00000513984 ING1Q9UK53 422 aaPredicted RBP13.36□□□□□ -0.27
VCAN-211ENST00000513984 LOC101059948A0A1B0GTJ6 334 aa13.36□□□□□ -0.27
VCAN-211ENST00000513984 OR2M5A3KFT3 312 aa13.36□□□□□ -0.27
VCAN-211ENST00000513984 FABP12A6NFH5 140 aa13.36□□□□□ -0.27
VCAN-211ENST00000513984 ZNF879B4DU55 563 aa13.36□□□□□ -0.27
VCAN-211ENST00000513984 ZNF814B7Z6K7 855 aa13.36□□□□□ -0.27
VCAN-211ENST00000513984 SULT2B1O00204 365 aa13.36□□□□□ -0.27
VCAN-211ENST00000513984 HPGDSO60760 199 aa13.36□□□□□ -0.27
VCAN-211ENST00000513984 KHDRBS3O75525 346 aaKnown RBP13.36□□□□□ -0.27
VCAN-211ENST00000513984 SPARCP09486 303 aa13.36□□□□□ -0.27
VCAN-211ENST00000513984 PSMD7P51665 324 aa13.36□□□□□ -0.27
VCAN-211ENST00000513984 OR10A3P58181 314 aa13.36□□□□□ -0.27
VCAN-211ENST00000513984 PCK2Q16822 640 aa13.36□□□□□ -0.27
VCAN-211ENST00000513984 TEX30Q5JUR7 227 aa13.36□□□□□ -0.27
VCAN-211ENST00000513984 IDNKQ5T6J7 187 aa13.36□□□□□ -0.27
VCAN-211ENST00000513984 RAET1LQ5VY80 246 aa13.36□□□□□ -0.27
VCAN-211ENST00000513984 METAP1DQ6UB28 335 aaPredicted RBP13.36□□□□□ -0.27
VCAN-211ENST00000513984 LRRC69Q6ZNQ3 347 aa13.36□□□□□ -0.27
VCAN-211ENST00000513984 HDDC2Q7Z4H3 204 aa13.36□□□□□ -0.27
VCAN-211ENST00000513984 ZNF227Q86WZ6 799 aa13.36□□□□□ -0.27
VCAN-211ENST00000513984 ZNF679Q8IYX0 411 aa13.36□□□□□ -0.27
VCAN-211ENST00000513984 BEST3Q8N1M1 668 aa13.36□□□□□ -0.27
VCAN-211ENST00000513984 OR2G2Q8NGZ5 317 aa13.36□□□□□ -0.27
VCAN-211ENST00000513984 OR5AK2Q8NH90 309 aa13.36□□□□□ -0.27
VCAN-211ENST00000513984 NSMAFQ92636 917 aa13.36□□□□□ -0.27
VCAN-211ENST00000513984 JSRP1Q96MG2 331 aaPredicted RBP13.36□□□□□ -0.27
VCAN-211ENST00000513984 SOSTQ9BQB4 213 aa13.36□□□□□ -0.27
VCAN-211ENST00000513984 ZCCHC4Q9H5U6 513 aa13.36□□□□□ -0.27
VCAN-211ENST00000513984 POLE4Q9NR33 117 aa13.36□□□□□ -0.27
VCAN-211ENST00000513984 ADAM30Q9UKF2 790 aa13.36□□□□□ -0.27
VCAN-211ENST00000513984 MRPS18BQ9Y676 258 aaKnown RBP13.36□□□□□ -0.27
VCAN-211ENST00000513984 IGKV1D-43A0A0B4J1Z2 117 aa13.35□□□□□ -0.27
VCAN-211ENST00000513984 A0A0G2JMM0 328 aa13.35□□□□□ -0.27
VCAN-211ENST00000513984 A0A1W2PPB8 328 aa13.35□□□□□ -0.27
VCAN-211ENST00000513984 A0A1W2PRS3 328 aa13.35□□□□□ -0.27
VCAN-211ENST00000513984 OR4C45A6NMZ5 311 aa13.35□□□□□ -0.27
VCAN-211ENST00000513984 KIR3DP1A8MWS1 328 aa13.35□□□□□ -0.27
VCAN-211ENST00000513984 STMND1H3BQB6 276 aa13.35□□□□□ -0.27
VCAN-211ENST00000513984 SLC19A2O60779 497 aa13.35□□□□□ -0.27
VCAN-211ENST00000513984 PTTG1O95997 202 aa13.35□□□□□ -0.27
VCAN-211ENST00000513984 HRGP04196 525 aa13.35□□□□□ -0.27
VCAN-211ENST00000513984 PTBP1P26599 531 aaKnown RBP eCLIP13.35□□□□□ -0.27
VCAN-211ENST00000513984 SRD5A2P31213 254 aa13.35□□□□□ -0.27
VCAN-211ENST00000513984 DNASE1L1P49184 302 aa13.35□□□□□ -0.27
VCAN-211ENST00000513984 EVX1P49640 407 aa13.35□□□□□ -0.27
VCAN-211ENST00000513984 SLC17A1Q14916 467 aa13.35□□□□□ -0.27
VCAN-211ENST00000513984 MEP1BQ16820 701 aa13.35□□□□□ -0.27
VCAN-211ENST00000513984 HSD17B12Q53GQ0 312 aa13.35□□□□□ -0.27
VCAN-211ENST00000513984 KCTD18Q6PI47 426 aaPredicted RBP13.35□□□□□ -0.27
VCAN-211ENST00000513984 GDPD1Q8N9F7 314 aa13.35□□□□□ -0.27
VCAN-211ENST00000513984 POC5Q8NA72 575 aa13.35□□□□□ -0.27
VCAN-211ENST00000513984 THOC3Q96J01 351 aaKnown RBP13.35□□□□□ -0.27
VCAN-211ENST00000513984 EMC6Q9BV81 110 aa13.35□□□□□ -0.27
VCAN-211ENST00000513984 C14orf119Q9NWQ9 140 aa13.35□□□□□ -0.27
VCAN-211ENST00000513984 ANKRD10Q9NXR5 420 aa13.35□□□□□ -0.27
VCAN-211ENST00000513984 KLHL9Q9P2J3 617 aa13.35□□□□□ -0.27
VCAN-211ENST00000513984 MED13Q9UHV7 2174 aa13.35□□□□□ -0.27
VCAN-211ENST00000513984 CNTRLQ7Z7A1 2325 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms