RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 GAAP10253 952 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 BMP2P12643 396 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 PPP5CP53041 499 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 ACVR1Q04771 509 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 ATXN7L3Q14CW9 347 aaPredicted RBP3.88□□□□□ -1.79
VCAN-209ENST00000513016 TMEM92Q6UXU6 159 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 GDPD1Q8N9F7 314 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 GTF2H4Q92759 462 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 SLC35E1Q96K37 410 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 SDF2Q99470 211 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 GDF15Q99988 308 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 ABCG5Q9H222 651 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 PLA2G3Q9NZ20 509 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 EHFQ9NZC4 300 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 VAPAQ9P0L0 249 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 LSM5Q9Y4Y9 91 aaKnown RBP3.88□□□□□ -1.79
VCAN-209ENST00000513016 BLVRBP30043 206 aaPredicted RBP3.88□□□□□ -1.79
VCAN-209ENST00000513016 ZNF136P52737 540 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 DUSP2Q05923 314 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 DUSP8Q13202 625 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 P2RY14Q15391 338 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 SHBQ15464 509 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 DUSP5Q16690 384 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 PRSS42Q7Z5A4 293 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 VASH2Q86V25 355 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 OR5AS1Q8N127 324 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 PNPLA1Q8N8W4 532 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 DEFB108BQ8NET1 73 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 OR13C9Q8NGT0 318 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 CACNG6Q9BXT2 260 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 QRSL1Q9H0R6 528 aaKnown RBP3.88□□□□□ -1.79
VCAN-209ENST00000513016 SYNPO2LQ9H987 977 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 NOX3Q9HBY0 568 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 HES4Q9HCC6 221 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 OR2S2Q9NQN1 319 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 AK6Q9Y3D8 172 aaKnown RBP3.88□□□□□ -1.79
VCAN-209ENST00000513016 SLX4Q8IY92 1834 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 CCL21O00585 134 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 FGF17O60258 216 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 SULT1C4O75897 302 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 IGHV3-9P01782 118 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 GP1BAP07359 652 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 FTH1P19P0C7X4 201 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 ITGAMP11215 1152 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 HTR2AP28223 471 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 ABCD3P28288 659 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 CD79BP40259 229 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 AGFG1P52594 562 aaKnown RBP3.88□□□□□ -1.79
VCAN-209ENST00000513016 ZNF181Q2M3W8 571 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 SMIM21Q3B7S5 101 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.88□□□□□ -1.79
VCAN-209ENST00000513016 SFRP5Q5T4F7 317 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 NXNL2Q5VZ03 156 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 FBXW12Q6X9E4 464 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 Q6ZTK2 550 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 DTWD1Q8N5C7 304 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 ZFP41Q8N8Y5 198 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 SIMC1Q8NDZ2 872 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 CHDHQ8NE62 594 aaPredicted RBP3.88□□□□□ -1.79
VCAN-209ENST00000513016 OR2Y1Q8NGV0 311 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 SYNPRQ8TBG9 265 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 EGLN2Q96KS0 407 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 TMEM246Q9BRR3 403 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 SYT11Q9BT88 431 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 RPP25Q9BUL9 199 aaKnown RBP3.88□□□□□ -1.79
VCAN-209ENST00000513016 NMNAT2Q9BZQ4 307 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 RGCCQ9H4X1 137 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 NOX4Q9NPH5 578 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 PRELID1Q9Y255 219 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 TRAV6A0A075B6T7 132 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 TERTO14746 1132 aaKnown RBP3.88□□□□□ -1.79
VCAN-209ENST00000513016 BET1O15155 118 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 SMAD9O15198 467 aaKnown RBP3.88□□□□□ -1.79
VCAN-209ENST00000513016 GJB3O75712 270 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 TUSC2O75896 110 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 CPEP16870 476 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 ELK4P28324 431 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 PTGER1P34995 402 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 CSN1S1P47710 185 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 ALKBH1Q13686 389 aaKnown RBP3.88□□□□□ -1.79
VCAN-209ENST00000513016 SYT14P1Q58G82 188 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 METTL11BQ5VVY1 283 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 RHBDD2Q6NTF9 364 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 ANKRD37Q7Z713 158 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 NAA40Q86UY6 237 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 CATSPERDQ86XM0 798 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 OR2AE1Q8NHA4 323 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 SELENOIQ9C0D9 397 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 SLCO5A1Q9H2Y9 848 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 SLC39A9Q9NUM3 307 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 RAB22AQ9UL26 194 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 EXO1Q9UQ84 846 aaKnown RBP3.88□□□□□ -1.79
VCAN-209ENST00000513016 A0A1W2PR48 441 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 C5orf49A4QMS7 147 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 H3BSA7 217 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 TNFSF11O14788 317 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 PIP5K1CO60331 668 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 CHRNB1P11230 501 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 ANXA7P20073 488 aaKnown RBP3.88□□□□□ -1.79
VCAN-209ENST00000513016 LAP3P28838 519 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms