RNA–Protein interactions for RNA: ENST00000511332.1

COL6A6-203, Transcript of collagen type VI alpha 6 chain, humanhuman

TSL 5

Gene COL6A6, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-203ENST00000511332 A0A1W2PR80 420 aa11.25□□□□□ -0.61
COL6A6-203ENST00000511332 SLC22A23A1A5C7 686 aa11.25□□□□□ -0.61
COL6A6-203ENST00000511332 FAM221AA4D161 298 aa11.25□□□□□ -0.61
COL6A6-203ENST00000511332 H3BN98 237 aa11.25□□□□□ -0.61
COL6A6-203ENST00000511332 H7C1C5 153 aa11.25□□□□□ -0.61
COL6A6-203ENST00000511332 BHLHE40O14503 412 aa11.25□□□□□ -0.61
COL6A6-203ENST00000511332 MGRN1O60291 552 aa11.25□□□□□ -0.61
COL6A6-203ENST00000511332 RENP00797 406 aa11.25□□□□□ -0.61
COL6A6-203ENST00000511332 HRGP04196 525 aa11.25□□□□□ -0.61
COL6A6-203ENST00000511332 OR8G3PP0DMU2 310 aa11.25□□□□□ -0.61
COL6A6-203ENST00000511332 GUCA1AP43080 201 aaPredicted RBP11.25□□□□□ -0.61
COL6A6-203ENST00000511332 CAPZA2P47755 286 aa11.25□□□□□ -0.61
COL6A6-203ENST00000511332 LCN6P62502 163 aa11.25□□□□□ -0.61
COL6A6-203ENST00000511332 MRPS34P82930 218 aaKnown RBP11.25□□□□□ -0.61
COL6A6-203ENST00000511332 SLC36A3Q495N2 470 aa11.25□□□□□ -0.61
COL6A6-203ENST00000511332 FAHD1Q6P587 224 aa11.25□□□□□ -0.61
COL6A6-203ENST00000511332 DNM1P34Q6PK57 102 aa11.25□□□□□ -0.61
COL6A6-203ENST00000511332 TMEM108Q6UXF1 575 aa11.25□□□□□ -0.61
COL6A6-203ENST00000511332 DPPA2Q7Z7J5 298 aa11.25□□□□□ -0.61
COL6A6-203ENST00000511332 AMIGO2Q86SJ2 522 aa11.25□□□□□ -0.61
COL6A6-203ENST00000511332 SLC22A24Q8N4F4 322 aa11.25□□□□□ -0.61
COL6A6-203ENST00000511332 WDR31Q8NA23 367 aa11.25□□□□□ -0.61
COL6A6-203ENST00000511332 OR8D4Q8NGM9 314 aa11.25□□□□□ -0.61
COL6A6-203ENST00000511332 PLPPR2Q96GM1 343 aa11.25□□□□□ -0.61
COL6A6-203ENST00000511332 TSSK6Q9BXA6 273 aa11.25□□□□□ -0.61
COL6A6-203ENST00000511332 OSBPL10Q9BXB5 764 aa11.25□□□□□ -0.61
COL6A6-203ENST00000511332 PLA2G12AQ9BZM1 189 aa11.25□□□□□ -0.61
COL6A6-203ENST00000511332 PAPOLBQ9NRJ5 636 aaKnown RBP11.25□□□□□ -0.61
COL6A6-203ENST00000511332 NPAP1Q9NZP6 1156 aa11.25□□□□□ -0.61
COL6A6-203ENST00000511332 VSX1Q9NZR4 365 aaPredicted RBP11.25□□□□□ -0.61
COL6A6-203ENST00000511332 ENOPH1Q9UHY7 261 aa11.25□□□□□ -0.61
COL6A6-203ENST00000511332 PRR14LQ5THK1 2151 aa11.25□□□□□ -0.61
COL6A6-203ENST00000511332 FLNBO75369 2602 aaKnown RBP11.24□□□□□ -0.61
COL6A6-203ENST00000511332 HEATR1Q9H583 2144 aaKnown RBP11.24□□□□□ -0.61
COL6A6-203ENST00000511332 CENPEQ02224 2701 aa11.24□□□□□ -0.61
COL6A6-203ENST00000511332 ERICH4A6NGS2 130 aa11.24□□□□□ -0.61
COL6A6-203ENST00000511332 H3BNX3 289 aa11.24□□□□□ -0.61
COL6A6-203ENST00000511332 HAX1O00165 279 aa11.24□□□□□ -0.61
COL6A6-203ENST00000511332 SIAH2O43255 324 aa11.24□□□□□ -0.61
COL6A6-203ENST00000511332 UBL3O95164 117 aa11.24□□□□□ -0.61
COL6A6-203ENST00000511332 CD3EP07766 207 aa11.24□□□□□ -0.61
COL6A6-203ENST00000511332 OSMP13725 252 aa11.24□□□□□ -0.61
COL6A6-203ENST00000511332 PRF1P14222 555 aa11.24□□□□□ -0.61
COL6A6-203ENST00000511332 HIST1H1CP16403 213 aaKnown RBP11.24□□□□□ -0.61
COL6A6-203ENST00000511332 NPR2P20594 1047 aa11.24□□□□□ -0.61
COL6A6-203ENST00000511332 PRKACGP22612 351 aa11.24□□□□□ -0.61
COL6A6-203ENST00000511332 PTAFRP25105 342 aa11.24□□□□□ -0.61
COL6A6-203ENST00000511332 CRABP1P29762 137 aa11.24□□□□□ -0.61
COL6A6-203ENST00000511332 ZNF83P51522 516 aa11.24□□□□□ -0.61
COL6A6-203ENST00000511332 BSPH1Q075Z2 132 aa11.24□□□□□ -0.61
COL6A6-203ENST00000511332 GSG1Q2KHT4 349 aa11.24□□□□□ -0.61
COL6A6-203ENST00000511332 C3orf36Q3SXR2 165 aa11.24□□□□□ -0.61
COL6A6-203ENST00000511332 NCMAPQ5T1S8 102 aa11.24□□□□□ -0.61
COL6A6-203ENST00000511332 LEG1Q6P5S2 330 aa11.24□□□□□ -0.61
COL6A6-203ENST00000511332 SLC25A47Q6Q0C1 308 aa11.24□□□□□ -0.61
COL6A6-203ENST00000511332 PARP8Q8N3A8 854 aa11.24□□□□□ -0.61
COL6A6-203ENST00000511332 LNX2Q8N448 690 aa11.24□□□□□ -0.61
COL6A6-203ENST00000511332 FAM169BQ8N8A8 192 aa11.24□□□□□ -0.61
COL6A6-203ENST00000511332 NSMAFQ92636 917 aa11.24□□□□□ -0.61
COL6A6-203ENST00000511332 TEX12Q9BXU0 123 aa11.24□□□□□ -0.61
COL6A6-203ENST00000511332 SYT4Q9H2B2 425 aa11.24□□□□□ -0.61
COL6A6-203ENST00000511332 SEMA6AQ9H2E6 1030 aa11.24□□□□□ -0.61
COL6A6-203ENST00000511332 S100A14Q9HCY8 104 aa11.24□□□□□ -0.61
COL6A6-203ENST00000511332 KRT84Q9NSB2 600 aa11.24□□□□□ -0.61
COL6A6-203ENST00000511332 REV1Q9UBZ9 1251 aa11.24□□□□□ -0.61
COL6A6-203ENST00000511332 KLHL21Q9UJP4 597 aa11.24□□□□□ -0.61
COL6A6-203ENST00000511332 FBXL3Q9UKT7 428 aa11.24□□□□□ -0.61
COL6A6-203ENST00000511332 OAZ3Q9UMX2 235 aa11.24□□□□□ -0.61
COL6A6-203ENST00000511332 HRNRQ86YZ3 2850 aaPredicted RBP11.23□□□□□ -0.61
COL6A6-203ENST00000511332 CACNA1DQ01668 2161 aa11.23□□□□□ -0.61
COL6A6-203ENST00000511332 A0A1W2PPL8 197 aa11.23□□□□□ -0.61
COL6A6-203ENST00000511332 RIIAD1A6NNX1 92 aa11.23□□□□□ -0.61
COL6A6-203ENST00000511332 M0R1B8 84 aa11.23□□□□□ -0.61
COL6A6-203ENST00000511332 RAB36O95755 333 aa11.23□□□□□ -0.61
COL6A6-203ENST00000511332 IFNGP01579 166 aa11.23□□□□□ -0.61
COL6A6-203ENST00000511332 TP53P04637 393 aaPredicted RBP11.23□□□□□ -0.61
COL6A6-203ENST00000511332 ARR3P36575 388 aa11.23□□□□□ -0.61
COL6A6-203ENST00000511332 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.23□□□□□ -0.61
COL6A6-203ENST00000511332 PGGHGQ32M88 737 aa11.23□□□□□ -0.61
COL6A6-203ENST00000511332 SLC36A2Q495M3 483 aa11.23□□□□□ -0.61
COL6A6-203ENST00000511332 SLC27A4Q6P1M0 643 aa11.23□□□□□ -0.61
COL6A6-203ENST00000511332 PTCHD4Q6ZW05 846 aa11.23□□□□□ -0.61
COL6A6-203ENST00000511332 SLC16A14Q7RTX9 510 aa11.23□□□□□ -0.61
COL6A6-203ENST00000511332 ICA1LQ8NDH6 482 aa11.23□□□□□ -0.61
COL6A6-203ENST00000511332 SDR9C7Q8NEX9 313 aa11.23□□□□□ -0.61
COL6A6-203ENST00000511332 OR4K13Q8NH42 304 aa11.23□□□□□ -0.61
COL6A6-203ENST00000511332 SLC38A2Q96QD8 506 aa11.23□□□□□ -0.61
COL6A6-203ENST00000511332 PKP2Q99959 881 aa11.23□□□□□ -0.61
COL6A6-203ENST00000511332 KCNN2Q9H2S1 579 aa11.23□□□□□ -0.61
COL6A6-203ENST00000511332 CRNNQ9UBG3 495 aaPredicted RBP11.23□□□□□ -0.61
COL6A6-203ENST00000511332 RNF115Q9Y4L5 304 aa11.23□□□□□ -0.61
COL6A6-203ENST00000511332 UGT2A1Q9Y4X1 527 aa11.23□□□□□ -0.61
COL6A6-203ENST00000511332 IGKV1D-43A0A0B4J1Z2 117 aa11.22□□□□□ -0.61
COL6A6-203ENST00000511332 SAC3D1A6NKF1 404 aa11.22□□□□□ -0.61
COL6A6-203ENST00000511332 SLC16A7O60669 478 aa11.22□□□□□ -0.61
COL6A6-203ENST00000511332 KHDRBS3O75525 346 aaKnown RBP11.22□□□□□ -0.61
COL6A6-203ENST00000511332 IGKV3-15P01624 115 aa11.22□□□□□ -0.61
COL6A6-203ENST00000511332 HLA-HP01893 362 aa11.22□□□□□ -0.61
COL6A6-203ENST00000511332 CD79AP11912 226 aa11.22□□□□□ -0.61
COL6A6-203ENST00000511332 CBR1P16152 277 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms