RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 HGFACQ04756 655 aa12.13□□□□□ -0.47
DDX41-212ENST00000511040 CHRNB3Q05901 458 aa12.13□□□□□ -0.47
DDX41-212ENST00000511040 RAB39AQ14964 217 aa12.13□□□□□ -0.47
DDX41-212ENST00000511040 C3orf36Q3SXR2 165 aa12.13□□□□□ -0.47
DDX41-212ENST00000511040 FAM98BQ52LJ0 330 aaKnown RBP12.13□□□□□ -0.47
DDX41-212ENST00000511040 AGAP6Q5VW22 663 aa12.13□□□□□ -0.47
DDX41-212ENST00000511040 SLC25A47Q6Q0C1 308 aa12.13□□□□□ -0.47
DDX41-212ENST00000511040 YTHDF3Q7Z739 585 aaKnown RBP12.13□□□□□ -0.47
DDX41-212ENST00000511040 FBXL14Q8N1E6 418 aa12.13□□□□□ -0.47
DDX41-212ENST00000511040 LRRC18Q8N456 261 aa12.13□□□□□ -0.47
DDX41-212ENST00000511040 ARIH2OSQ8N7S6 290 aa12.13□□□□□ -0.47
DDX41-212ENST00000511040 FAM169BQ8N8A8 192 aa12.13□□□□□ -0.47
DDX41-212ENST00000511040 NANOS1Q8WY41 292 aaKnown RBP12.13□□□□□ -0.47
DDX41-212ENST00000511040 RASD2Q96D21 266 aa12.13□□□□□ -0.47
DDX41-212ENST00000511040 BTBD10Q9BSF8 475 aa12.13□□□□□ -0.47
DDX41-212ENST00000511040 ALG12Q9BV10 488 aa12.13□□□□□ -0.47
DDX41-212ENST00000511040 GSX2Q9BZM3 304 aa12.13□□□□□ -0.47
DDX41-212ENST00000511040 NDEL1Q9GZM8 345 aa12.13□□□□□ -0.47
DDX41-212ENST00000511040 MAGIXQ9H6Y5 334 aa12.13□□□□□ -0.47
DDX41-212ENST00000511040 ZNF701Q9NV72 531 aaPredicted RBP12.13□□□□□ -0.47
DDX41-212ENST00000511040 FAIMQ9NVQ4 179 aa12.13□□□□□ -0.47
DDX41-212ENST00000511040 VNN3Q9NY84 501 aa12.13□□□□□ -0.47
DDX41-212ENST00000511040 GRHPRQ9UBQ7 328 aa12.13□□□□□ -0.47
DDX41-212ENST00000511040 UGT2A1Q9Y4X1 527 aa12.13□□□□□ -0.47
DDX41-212ENST00000511040 IER3IP1Q9Y5U9 82 aa12.13□□□□□ -0.47
DDX41-212ENST00000511040 ARID1AO14497 2285 aa12.13□□□□□ -0.47
DDX41-212ENST00000511040 F8P00451 2351 aa12.12□□□□□ -0.47
DDX41-212ENST00000511040 IGHV2OR16-5A0A0B4J2B6 119 aa12.12□□□□□ -0.47
DDX41-212ENST00000511040 TEX13CA0A0J9YWL9 993 aa12.12□□□□□ -0.47
DDX41-212ENST00000511040 OVOL3O00110 214 aa12.12□□□□□ -0.47
DDX41-212ENST00000511040 SOCS2O14508 198 aa12.12□□□□□ -0.47
DDX41-212ENST00000511040 DNAJC8O75937 253 aaPredicted RBP12.12□□□□□ -0.47
DDX41-212ENST00000511040 UBL3O95164 117 aa12.12□□□□□ -0.47
DDX41-212ENST00000511040 FARS2O95363 451 aaKnown RBP12.12□□□□□ -0.47
DDX41-212ENST00000511040 RAB36O95755 333 aa12.12□□□□□ -0.47
DDX41-212ENST00000511040 PAX7P23759 505 aa12.12□□□□□ -0.47
DDX41-212ENST00000511040 MAGEA2P43356 314 aa12.12□□□□□ -0.47
DDX41-212ENST00000511040 BNIP1Q12981 228 aa12.12□□□□□ -0.47
DDX41-212ENST00000511040 SGCAQ16586 387 aa12.12□□□□□ -0.47
DDX41-212ENST00000511040 MESTQ5EB52 335 aa12.12□□□□□ -0.47
DDX41-212ENST00000511040 C10orf128Q5T292 105 aa12.12□□□□□ -0.47
DDX41-212ENST00000511040 FAM205BPQ63HN1 556 aa12.12□□□□□ -0.47
DDX41-212ENST00000511040 PGBD2Q6P3X8 592 aa12.12□□□□□ -0.47
DDX41-212ENST00000511040 FAM122BQ7Z309 247 aa12.12□□□□□ -0.47
DDX41-212ENST00000511040 DTX2Q86UW9 622 aa12.12□□□□□ -0.47
DDX41-212ENST00000511040 LRRC75A-AS1Q8N1F1 130 aa12.12□□□□□ -0.47
DDX41-212ENST00000511040 MUC15Q8N387 334 aa12.12□□□□□ -0.47
DDX41-212ENST00000511040 OR9Q2Q8NGE9 314 aa12.12□□□□□ -0.47
DDX41-212ENST00000511040 OR4C15Q8NGM1 316 aa12.12□□□□□ -0.47
DDX41-212ENST00000511040 FANK1Q8TC84 345 aa12.12□□□□□ -0.47
DDX41-212ENST00000511040 ZNF75AQ96N20 296 aa12.12□□□□□ -0.47
DDX41-212ENST00000511040 ZNF570Q96NI8 536 aa12.12□□□□□ -0.47
DDX41-212ENST00000511040 RBP7Q96R05 134 aa12.12□□□□□ -0.47
DDX41-212ENST00000511040 TRIM15Q9C019 465 aa12.12□□□□□ -0.47
DDX41-212ENST00000511040 RNF121Q9H920 327 aa12.12□□□□□ -0.47
DDX41-212ENST00000511040 MOV10Q9HCE1 1003 aaKnown RBP12.12□□□□□ -0.47
DDX41-212ENST00000511040 LYVE1Q9Y5Y7 322 aa12.12□□□□□ -0.47
DDX41-212ENST00000511040 PLCE1Q9P212 2302 aa12.11□□□□□ -0.47
DDX41-212ENST00000511040 A0A1W2PPL8 197 aa12.11□□□□□ -0.47
DDX41-212ENST00000511040 XKRYO14609 159 aa12.11□□□□□ -0.47
DDX41-212ENST00000511040 IMPA2O14732 288 aa12.11□□□□□ -0.47
DDX41-212ENST00000511040 NDUFS7O75251 213 aa12.11□□□□□ -0.47
DDX41-212ENST00000511040 KRT36O76013 467 aa12.11□□□□□ -0.47
DDX41-212ENST00000511040 PPP1R3DO95685 299 aa12.11□□□□□ -0.47
DDX41-212ENST00000511040 CD99P14209 185 aa12.11□□□□□ -0.47
DDX41-212ENST00000511040 PAX1P15863 534 aa12.11□□□□□ -0.47
DDX41-212ENST00000511040 ZNF14P17017 642 aaPredicted RBP12.11□□□□□ -0.47
DDX41-212ENST00000511040 IFNGR2P38484 337 aa12.11□□□□□ -0.47
DDX41-212ENST00000511040 ZNF133P52736 654 aaPredicted RBP12.11□□□□□ -0.47
DDX41-212ENST00000511040 TRAP1Q12931 704 aaKnown RBP12.11□□□□□ -0.47
DDX41-212ENST00000511040 KRR1Q13601 381 aaKnown RBP12.11□□□□□ -0.47
DDX41-212ENST00000511040 ETFDHQ16134 617 aa12.11□□□□□ -0.47
DDX41-212ENST00000511040 THEM4Q5T1C6 240 aa12.11□□□□□ -0.47
DDX41-212ENST00000511040 SHEQ5VZ18 495 aa12.11□□□□□ -0.47
DDX41-212ENST00000511040 ZNF544Q6NX49 715 aa12.11□□□□□ -0.47
DDX41-212ENST00000511040 PGM2L1Q6PCE3 622 aa12.11□□□□□ -0.47
DDX41-212ENST00000511040 SMARCD3Q6STE5 483 aa12.11□□□□□ -0.47
DDX41-212ENST00000511040 SLC16A14Q7RTX9 510 aa12.11□□□□□ -0.47
DDX41-212ENST00000511040 ADGRG5Q8IZF4 528 aa12.11□□□□□ -0.47
DDX41-212ENST00000511040 GNPDA2Q8TDQ7 276 aa12.11□□□□□ -0.47
DDX41-212ENST00000511040 FBXO17Q96EF6 278 aa12.11□□□□□ -0.47
DDX41-212ENST00000511040 Q96MF0 132 aa12.11□□□□□ -0.47
DDX41-212ENST00000511040 FOXN4Q96NZ1 517 aa12.11□□□□□ -0.47
DDX41-212ENST00000511040 CACNG6Q9BXT2 260 aa12.11□□□□□ -0.47
DDX41-212ENST00000511040 RERGLQ9H628 205 aa12.11□□□□□ -0.47
DDX41-212ENST00000511040 DENND2DQ9H6A0 471 aaPredicted RBP12.11□□□□□ -0.47
DDX41-212ENST00000511040 CA10Q9NS85 328 aa12.11□□□□□ -0.47
DDX41-212ENST00000511040 CBLN4Q9NTU7 201 aa12.11□□□□□ -0.47
DDX41-212ENST00000511040 GDF2Q9UK05 429 aaPredicted RBP12.11□□□□□ -0.47
DDX41-212ENST00000511040 U3KQV3 271 aa12.11□□□□□ -0.47
DDX41-212ENST00000511040 HIVEP1P15822 2718 aa12.11□□□□□ -0.47
DDX41-212ENST00000511040 ITPR3Q14573 2671 aa12.11□□□□□ -0.47
DDX41-212ENST00000511040 SLC22A23A1A5C7 686 aa12.1□□□□□ -0.47
DDX41-212ENST00000511040 CCNB2O95067 398 aa12.1□□□□□ -0.47
DDX41-212ENST00000511040 CCL2P13500 99 aa12.1□□□□□ -0.47
DDX41-212ENST00000511040 FPR3P25089 353 aa12.1□□□□□ -0.47
DDX41-212ENST00000511040 APOBEC3AP31941 199 aaPredicted RBP12.1□□□□□ -0.47
DDX41-212ENST00000511040 THBS4P35443 961 aa12.1□□□□□ -0.47
DDX41-212ENST00000511040 GSSP48637 474 aa12.1□□□□□ -0.47
DDX41-212ENST00000511040 HMGA2P52926 109 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms