RNA–Protein interactions for RNA: ENST00000506941.1

NPHP4-210, Transcript of nephrocystin 4, humanhuman

TSL 4

Gene NPHP4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-210ENST00000506941 NEUROG1Q92886 237 aa15.85■□□□□ 0.13
NPHP4-210ENST00000506941 FEVQ99581 238 aa15.85■□□□□ 0.13
NPHP4-210ENST00000506941 NIPSNAP1Q9BPW8 284 aa15.85■□□□□ 0.13
NPHP4-210ENST00000506941 SMURF2Q9HAU4 748 aa15.85■□□□□ 0.13
NPHP4-210ENST00000506941 ARMC1Q9NVT9 282 aa15.85■□□□□ 0.13
NPHP4-210ENST00000506941 B3GNT2Q9NY97 397 aa15.85■□□□□ 0.13
NPHP4-210ENST00000506941 CRNNQ9UBG3 495 aaPredicted RBP15.85■□□□□ 0.13
NPHP4-210ENST00000506941 MGAT4BQ9UQ53 548 aa15.85■□□□□ 0.13
NPHP4-210ENST00000506941 RNF115Q9Y4L5 304 aa15.85■□□□□ 0.13
NPHP4-210ENST00000506941 MAGED1Q9Y5V3 778 aaPredicted RBP15.85■□□□□ 0.13
NPHP4-210ENST00000506941 CDH10Q9Y6N8 788 aa15.85■□□□□ 0.13
NPHP4-210ENST00000506941 IGHV1-18A0A0C4DH31 117 aa15.84■□□□□ 0.13
NPHP4-210ENST00000506941 SLC22A23A1A5C7 686 aa15.84■□□□□ 0.13
NPHP4-210ENST00000506941 PRSS37A4D1T9 235 aa15.84■□□□□ 0.13
NPHP4-210ENST00000506941 ARRDC5A6NEK1 342 aa15.84■□□□□ 0.13
NPHP4-210ENST00000506941 ABCD4O14678 606 aa15.84■□□□□ 0.13
NPHP4-210ENST00000506941 E2F6O75461 281 aa15.84■□□□□ 0.13
NPHP4-210ENST00000506941 HLA-HP01893 362 aa15.84■□□□□ 0.13
NPHP4-210ENST00000506941 CD40P25942 277 aa15.84■□□□□ 0.13
NPHP4-210ENST00000506941 KPNB1Q14974 876 aaKnown RBP15.84■□□□□ 0.13
NPHP4-210ENST00000506941 THEM4Q5T1C6 240 aa15.84■□□□□ 0.13
NPHP4-210ENST00000506941 ADAM5Q6NVV9 412 aa15.84■□□□□ 0.13
NPHP4-210ENST00000506941 TMEM108Q6UXF1 575 aa15.84■□□□□ 0.13
NPHP4-210ENST00000506941 RASSF6Q6ZTQ3 369 aa15.84■□□□□ 0.13
NPHP4-210ENST00000506941 CDH24Q86UP0 819 aa15.84■□□□□ 0.13
NPHP4-210ENST00000506941 MDP1Q86V88 176 aa15.84■□□□□ 0.13
NPHP4-210ENST00000506941 SKA3Q8IX90 412 aa15.84■□□□□ 0.13
NPHP4-210ENST00000506941 SLC22A24Q8N4F4 322 aa15.84■□□□□ 0.13
NPHP4-210ENST00000506941 FGFBP3Q8TAT2 258 aa15.84■□□□□ 0.13
NPHP4-210ENST00000506941 NSMAFQ92636 917 aa15.84■□□□□ 0.13
NPHP4-210ENST00000506941 ERMAPQ96PL5 475 aaPredicted RBP15.84■□□□□ 0.13
NPHP4-210ENST00000506941 IFT27Q9BW83 186 aa15.84■□□□□ 0.13
NPHP4-210ENST00000506941 SEC61A2Q9H9S3 476 aa15.84■□□□□ 0.13
NPHP4-210ENST00000506941 UBTD1Q9HAC8 227 aa15.84■□□□□ 0.13
NPHP4-210ENST00000506941 PDP1Q9P0J1 537 aaPredicted RBP15.84■□□□□ 0.13
NPHP4-210ENST00000506941 AP4S1Q9Y587 144 aa15.84■□□□□ 0.13
NPHP4-210ENST00000506941 CELSR1Q9NYQ6 3014 aa15.84■□□□□ 0.13
NPHP4-210ENST00000506941 SHISA9B4DS77 424 aa15.83■□□□□ 0.12
NPHP4-210ENST00000506941 XKRYO14609 159 aa15.83■□□□□ 0.12
NPHP4-210ENST00000506941 DEAF1O75398 565 aaPredicted RBP15.83■□□□□ 0.12
NPHP4-210ENST00000506941 SOX14O95416 240 aa15.83■□□□□ 0.12
NPHP4-210ENST00000506941 IGKV3-15P01624 115 aa15.83■□□□□ 0.12
NPHP4-210ENST00000506941 IGLV1-44P01699 117 aa15.83■□□□□ 0.12
NPHP4-210ENST00000506941 CELA3BP08861 270 aa15.83■□□□□ 0.12
NPHP4-210ENST00000506941 APEHP13798 732 aaKnown RBP15.83■□□□□ 0.12
NPHP4-210ENST00000506941 PTAFRP25105 342 aa15.83■□□□□ 0.12
NPHP4-210ENST00000506941 CDAP32320 146 aa15.83■□□□□ 0.12
NPHP4-210ENST00000506941 CDKN2AP42771 156 aaKnown RBP15.83■□□□□ 0.12
NPHP4-210ENST00000506941 CAPZA2P47755 286 aa15.83■□□□□ 0.12
NPHP4-210ENST00000506941 ZNF84P51523 738 aa15.83■□□□□ 0.12
NPHP4-210ENST00000506941 RPS6KA3P51812 740 aa15.83■□□□□ 0.12
NPHP4-210ENST00000506941 ACTR3P61158 418 aa15.83■□□□□ 0.12
NPHP4-210ENST00000506941 ATP6AP1Q15904 470 aa15.83■□□□□ 0.12
NPHP4-210ENST00000506941 CLEC12AQ5QGZ9 265 aa15.83■□□□□ 0.12
NPHP4-210ENST00000506941 PAMR1Q6UXH9 720 aa15.83■□□□□ 0.12
NPHP4-210ENST00000506941 YTHDF3Q7Z739 585 aaKnown RBP15.83■□□□□ 0.12
NPHP4-210ENST00000506941 NABP1Q96AH0 204 aa15.83■□□□□ 0.12
NPHP4-210ENST00000506941 ZNF75AQ96N20 296 aa15.83■□□□□ 0.12
NPHP4-210ENST00000506941 SLC38A2Q96QD8 506 aa15.83■□□□□ 0.12
NPHP4-210ENST00000506941 RBP7Q96R05 134 aa15.83■□□□□ 0.12
NPHP4-210ENST00000506941 SH3GL3Q99963 347 aa15.83■□□□□ 0.12
NPHP4-210ENST00000506941 IL20Q9NYY1 176 aa15.83■□□□□ 0.12
NPHP4-210ENST00000506941 ST6GALNAC2Q9UJ37 374 aa15.83■□□□□ 0.12
NPHP4-210ENST00000506941 VPS13CQ709C8 3753 aa15.82■□□□□ 0.12
NPHP4-210ENST00000506941 BHLHE40O14503 412 aa15.82■□□□□ 0.12
NPHP4-210ENST00000506941 ARPC3O15145 178 aa15.82■□□□□ 0.12
NPHP4-210ENST00000506941 PATE4P0C8F1 98 aa15.82■□□□□ 0.12
NPHP4-210ENST00000506941 OR8G3PP0DMU2 310 aa15.82■□□□□ 0.12
NPHP4-210ENST00000506941 CD79AP11912 226 aa15.82■□□□□ 0.12
NPHP4-210ENST00000506941 NR2C1P13056 603 aa15.82■□□□□ 0.12
NPHP4-210ENST00000506941 CBR1P16152 277 aa15.82■□□□□ 0.12
NPHP4-210ENST00000506941 GSTM3P21266 225 aa15.82■□□□□ 0.12
NPHP4-210ENST00000506941 PRKACGP22612 351 aa15.82■□□□□ 0.12
NPHP4-210ENST00000506941 MRPS34P82930 218 aaKnown RBP15.82■□□□□ 0.12
NPHP4-210ENST00000506941 PIGFQ07326 219 aa15.82■□□□□ 0.12
NPHP4-210ENST00000506941 ETFDHQ16134 617 aa15.82■□□□□ 0.12
NPHP4-210ENST00000506941 RPL13AP3Q6NVV1 102 aa15.82■□□□□ 0.12
NPHP4-210ENST00000506941 CD300LDQ6UXZ3 194 aa15.82■□□□□ 0.12
NPHP4-210ENST00000506941 ADCK1Q86TW2 530 aa15.82■□□□□ 0.12
NPHP4-210ENST00000506941 CCDC36Q8IYA8 594 aa15.82■□□□□ 0.12
NPHP4-210ENST00000506941 FAM169BQ8N8A8 192 aa15.82■□□□□ 0.12
NPHP4-210ENST00000506941 FNDC8Q8TC99 324 aa15.82■□□□□ 0.12
NPHP4-210ENST00000506941 AKAP1Q92667 903 aaKnown RBP eCLIP15.82■□□□□ 0.12
NPHP4-210ENST00000506941 SYT4Q9H2B2 425 aa15.82■□□□□ 0.12
NPHP4-210ENST00000506941 VSX1Q9NZR4 365 aaPredicted RBP15.82■□□□□ 0.12
NPHP4-210ENST00000506941 REV1Q9UBZ9 1251 aa15.82■□□□□ 0.12
NPHP4-210ENST00000506941 HS3ST1O14792 307 aa15.81■□□□□ 0.12
NPHP4-210ENST00000506941 AHCYL1O43865 530 aa15.81■□□□□ 0.12
NPHP4-210ENST00000506941 CECR9P0C854 216 aa15.81■□□□□ 0.12
NPHP4-210ENST00000506941 HIST1H1CP16403 213 aaKnown RBP15.81■□□□□ 0.12
NPHP4-210ENST00000506941 CTLA4P16410 223 aa15.81■□□□□ 0.12
NPHP4-210ENST00000506941 IDH3GP51553 393 aaPredicted RBP15.81■□□□□ 0.12
NPHP4-210ENST00000506941 DBPQ10586 325 aaPredicted RBP15.81■□□□□ 0.12
NPHP4-210ENST00000506941 GSG1Q2KHT4 349 aa15.81■□□□□ 0.12
NPHP4-210ENST00000506941 NRN1LQ496H8 165 aa15.81■□□□□ 0.12
NPHP4-210ENST00000506941 ZNF672Q499Z4 452 aaPredicted RBP15.81■□□□□ 0.12
NPHP4-210ENST00000506941 SHQ1Q6PI26 577 aaKnown RBP15.81■□□□□ 0.12
NPHP4-210ENST00000506941 FOXL2NBQ6ZUU3 175 aa15.81■□□□□ 0.12
NPHP4-210ENST00000506941 PIAS4Q8N2W9 510 aaPredicted RBP15.81■□□□□ 0.12
NPHP4-210ENST00000506941 OR52L1Q8NGH7 329 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms