RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 CMAHPQ9Y471 501 aa7.82□□□□□ -1.16
PDLIM5-209ENST00000506632 COL6A5A8TX70 2615 aa7.82□□□□□ -1.16
PDLIM5-209ENST00000506632 A0A087WUU8 490 aa7.81□□□□□ -1.16
PDLIM5-209ENST00000506632 IGKV1D-43A0A0B4J1Z2 117 aa7.81□□□□□ -1.16
PDLIM5-209ENST00000506632 LOC390937A0A1W2PQ73 354 aa7.81□□□□□ -1.16
PDLIM5-209ENST00000506632 A8MV72 311 aaPredicted RBP7.81□□□□□ -1.16
PDLIM5-209ENST00000506632 VSTM5A8MXK1 200 aa7.81□□□□□ -1.16
PDLIM5-209ENST00000506632 MCIDASD6RGH6 385 aa7.81□□□□□ -1.16
PDLIM5-209ENST00000506632 J3KTA2 159 aa7.81□□□□□ -1.16
PDLIM5-209ENST00000506632 NDUFAB1O14561 156 aa7.81□□□□□ -1.16
PDLIM5-209ENST00000506632 MGRN1O60291 552 aa7.81□□□□□ -1.16
PDLIM5-209ENST00000506632 SNX3O60493 162 aa7.81□□□□□ -1.16
PDLIM5-209ENST00000506632 FARS2O95363 451 aaKnown RBP7.81□□□□□ -1.16
PDLIM5-209ENST00000506632 IFNW1P05000 195 aa7.81□□□□□ -1.16
PDLIM5-209ENST00000506632 MMP7P09237 267 aaPredicted RBP7.81□□□□□ -1.16
PDLIM5-209ENST00000506632 IGHV4-31P0DP07 118 aa7.81□□□□□ -1.16
PDLIM5-209ENST00000506632 IFI30P13284 250 aa7.81□□□□□ -1.16
PDLIM5-209ENST00000506632 MAKP20794 623 aa7.81□□□□□ -1.16
PDLIM5-209ENST00000506632 USF1P22415 310 aaPredicted RBP7.81□□□□□ -1.16
PDLIM5-209ENST00000506632 GIFP27352 417 aa7.81□□□□□ -1.16
PDLIM5-209ENST00000506632 PRDX6P30041 224 aa7.81□□□□□ -1.16
PDLIM5-209ENST00000506632 NR4A2P43354 598 aa7.81□□□□□ -1.16
PDLIM5-209ENST00000506632 YAP1P46937 504 aaKnown RBP7.81□□□□□ -1.16
PDLIM5-209ENST00000506632 NUDT2P50583 147 aa7.81□□□□□ -1.16
PDLIM5-209ENST00000506632 SEC24CP53992 1094 aa7.81□□□□□ -1.16
PDLIM5-209ENST00000506632 CLRN1P58418 232 aa7.81□□□□□ -1.16
PDLIM5-209ENST00000506632 MRPS34P82930 218 aaKnown RBP7.81□□□□□ -1.16
PDLIM5-209ENST00000506632 MYBPC1Q00872 1141 aa7.81□□□□□ -1.16
PDLIM5-209ENST00000506632 PRKCDQ05655 676 aa7.81□□□□□ -1.16
PDLIM5-209ENST00000506632 LAPTM4AQ15012 233 aa7.81□□□□□ -1.16
PDLIM5-209ENST00000506632 TRAM2Q15035 370 aa7.81□□□□□ -1.16
PDLIM5-209ENST00000506632 TAF11Q15544 211 aa7.81□□□□□ -1.16
PDLIM5-209ENST00000506632 IFI44LQ53G44 452 aa7.81□□□□□ -1.16
PDLIM5-209ENST00000506632 SLC25A47Q6Q0C1 308 aa7.81□□□□□ -1.16
PDLIM5-209ENST00000506632 HIPK1Q86Z02 1210 aa7.81□□□□□ -1.16
PDLIM5-209ENST00000506632 NRMQ8IXM6 262 aa7.81□□□□□ -1.16
PDLIM5-209ENST00000506632 RNF113BQ8IZP6 322 aaKnown RBP7.81□□□□□ -1.16
PDLIM5-209ENST00000506632 ZCCHC24Q8N2G6 241 aaKnown RBP7.81□□□□□ -1.16
PDLIM5-209ENST00000506632 SYT14Q8NB59 555 aa7.81□□□□□ -1.16
PDLIM5-209ENST00000506632 FAM156AQ8NDB6 213 aa7.81□□□□□ -1.16
PDLIM5-209ENST00000506632 OR4K5Q8NGD3 323 aa7.81□□□□□ -1.16
PDLIM5-209ENST00000506632 NABP1Q96AH0 204 aa7.81□□□□□ -1.16
PDLIM5-209ENST00000506632 HSH2DQ96JZ2 352 aa7.81□□□□□ -1.16
PDLIM5-209ENST00000506632 FOXN4Q96NZ1 517 aa7.81□□□□□ -1.16
PDLIM5-209ENST00000506632 ELAC2Q9BQ52 826 aaKnown RBP7.81□□□□□ -1.16
PDLIM5-209ENST00000506632 PIMREGQ9BSJ6 248 aa7.81□□□□□ -1.16
PDLIM5-209ENST00000506632 RAB1BQ9H0U4 201 aa7.81□□□□□ -1.16
PDLIM5-209ENST00000506632 YAE1D1Q9NRH1 226 aa7.81□□□□□ -1.16
PDLIM5-209ENST00000506632 TMEM160Q9NX00 188 aa7.81□□□□□ -1.16
PDLIM5-209ENST00000506632 STX18Q9P2W9 335 aaKnown RBP7.81□□□□□ -1.16
PDLIM5-209ENST00000506632 RHCGQ9UBD6 479 aa7.81□□□□□ -1.16
PDLIM5-209ENST00000506632 SLC7A8Q9UHI5 535 aa7.81□□□□□ -1.16
PDLIM5-209ENST00000506632 UGT2A1Q9Y4X1 527 aa7.81□□□□□ -1.16
PDLIM5-209ENST00000506632 MALRD1Q5VYJ5 2156 aa7.81□□□□□ -1.16
PDLIM5-209ENST00000506632 IGHV4-61A0A0C4DH41 118 aa7.8□□□□□ -1.16
PDLIM5-209ENST00000506632 SYNGR3O43761 229 aa7.8□□□□□ -1.16
PDLIM5-209ENST00000506632 SLC2A10O95528 541 aa7.8□□□□□ -1.16
PDLIM5-209ENST00000506632 STAMBPO95630 424 aa7.8□□□□□ -1.16
PDLIM5-209ENST00000506632 SNAP29O95721 258 aa7.8□□□□□ -1.16
PDLIM5-209ENST00000506632 ZNF682O95780 498 aa7.8□□□□□ -1.16
PDLIM5-209ENST00000506632 SERPINA1P01009 418 aa7.8□□□□□ -1.16
PDLIM5-209ENST00000506632 DRD4P21917 467 aa7.8□□□□□ -1.16
PDLIM5-209ENST00000506632 IFNA8P32881 189 aa7.8□□□□□ -1.16
PDLIM5-209ENST00000506632 ZNF84P51523 738 aa7.8□□□□□ -1.16
PDLIM5-209ENST00000506632 PSME3P61289 254 aa7.8□□□□□ -1.16
PDLIM5-209ENST00000506632 RPL27P61353 136 aaKnown RBP7.8□□□□□ -1.16
PDLIM5-209ENST00000506632 RPS23P62266 143 aaKnown RBP7.8□□□□□ -1.16
PDLIM5-209ENST00000506632 FMODQ06828 376 aa7.8□□□□□ -1.16
PDLIM5-209ENST00000506632 ANKDD1AQ495B1 522 aa7.8□□□□□ -1.16
PDLIM5-209ENST00000506632 SLC36A2Q495M3 483 aa7.8□□□□□ -1.16
PDLIM5-209ENST00000506632 ALG10Q5BKT4 473 aa7.8□□□□□ -1.16
PDLIM5-209ENST00000506632 TMEM53Q6P2H8 277 aa7.8□□□□□ -1.16
PDLIM5-209ENST00000506632 VASH1Q7L8A9 365 aaPredicted RBP7.8□□□□□ -1.16
PDLIM5-209ENST00000506632 SLC16A14Q7RTX9 510 aa7.8□□□□□ -1.16
PDLIM5-209ENST00000506632 ZNF786Q8N393 782 aa7.8□□□□□ -1.16
PDLIM5-209ENST00000506632 PAQR4Q8N4S7 273 aaPredicted RBP7.8□□□□□ -1.16
PDLIM5-209ENST00000506632 SLC30A7Q8NEW0 376 aa7.8□□□□□ -1.16
PDLIM5-209ENST00000506632 ZNF519Q8TB69 540 aa7.8□□□□□ -1.16
PDLIM5-209ENST00000506632 NEU4Q8WWR8 484 aaPredicted RBP7.8□□□□□ -1.16
PDLIM5-209ENST00000506632 ACOT11Q8WXI4 607 aaPredicted RBP7.8□□□□□ -1.16
PDLIM5-209ENST00000506632 CMTM5Q96DZ9 223 aa7.8□□□□□ -1.16
PDLIM5-209ENST00000506632 C7orf34Q96L11 122 aa7.8□□□□□ -1.16
PDLIM5-209ENST00000506632 ALG12Q9BV10 488 aa7.8□□□□□ -1.16
PDLIM5-209ENST00000506632 FNDC11Q9BVV2 318 aa7.8□□□□□ -1.16
PDLIM5-209ENST00000506632 C1orf198Q9H425 327 aa7.8□□□□□ -1.16
PDLIM5-209ENST00000506632 ANKRD19PQ9H560 264 aa7.8□□□□□ -1.16
PDLIM5-209ENST00000506632 SIAEQ9HAT2 523 aa7.8□□□□□ -1.16
PDLIM5-209ENST00000506632 MYEF2Q9P2K5 600 aaKnown RBP7.8□□□□□ -1.16
PDLIM5-209ENST00000506632 SPEF1Q9Y4P9 236 aa7.8□□□□□ -1.16
PDLIM5-209ENST00000506632 ENPP4Q9Y6X5 453 aa7.8□□□□□ -1.16
PDLIM5-209ENST00000506632 IGLV3-9A0A075B6K5 115 aa7.79□□□□□ -1.16
PDLIM5-209ENST00000506632 TRAV27A0A087WT01 109 aa7.79□□□□□ -1.16
PDLIM5-209ENST00000506632 GMNCA6NCL1 334 aa7.79□□□□□ -1.16
PDLIM5-209ENST00000506632 M0R233 179 aa7.79□□□□□ -1.16
PDLIM5-209ENST00000506632 CDC42EP2O14613 210 aa7.79□□□□□ -1.16
PDLIM5-209ENST00000506632 GSTA4O15217 222 aa7.79□□□□□ -1.16
PDLIM5-209ENST00000506632 ADRA2AP08913 450 aa7.79□□□□□ -1.16
PDLIM5-209ENST00000506632 TACSTD2P09758 323 aa7.79□□□□□ -1.16
PDLIM5-209ENST00000506632 NR2C1P13056 603 aa7.79□□□□□ -1.16
PDLIM5-209ENST00000506632 DAOP14920 347 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms