RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 FGFBP3Q8TAT2 258 aa10.3□□□□□ -0.76
MED28-203ENST00000503945 RBP7Q96R05 134 aa10.3□□□□□ -0.76
MED28-203ENST00000503945 ZNF347Q96SE7 839 aa10.3□□□□□ -0.76
MED28-203ENST00000503945 FNDC11Q9BVV2 318 aa10.3□□□□□ -0.76
MED28-203ENST00000503945 MRPL37Q9BZE1 423 aaKnown RBP10.3□□□□□ -0.76
MED28-203ENST00000503945 CCDC134Q9H6E4 229 aa10.3□□□□□ -0.76
MED28-203ENST00000503945 SIAEQ9HAT2 523 aa10.3□□□□□ -0.76
MED28-203ENST00000503945 C20orf141Q9NUB4 165 aa10.3□□□□□ -0.76
MED28-203ENST00000503945 ARMCX1Q9P291 453 aa10.3□□□□□ -0.76
MED28-203ENST00000503945 SLC7A8Q9UHI5 535 aa10.3□□□□□ -0.76
MED28-203ENST00000503945 KCNS2Q9ULS6 477 aa10.3□□□□□ -0.76
MED28-203ENST00000503945 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.3□□□□□ -0.762e-6■■■□□ 17.5
MED28-203ENST00000503945 ARFGEF3Q5TH69 2177 aa10.29□□□□□ -0.76
MED28-203ENST00000503945 IGHV4-61A0A0C4DH41 118 aa10.29□□□□□ -0.76
MED28-203ENST00000503945 M0R233 179 aa10.29□□□□□ -0.76
MED28-203ENST00000503945 NDUFAB1O14561 156 aa10.29□□□□□ -0.76
MED28-203ENST00000503945 TRMUO75648 421 aaKnown RBP10.29□□□□□ -0.76
MED28-203ENST00000503945 NR2C1P13056 603 aa10.29□□□□□ -0.76
MED28-203ENST00000503945 ZNF23P17027 643 aa10.29□□□□□ -0.76
MED28-203ENST00000503945 TCN1P20061 433 aaPredicted RBP10.29□□□□□ -0.76
MED28-203ENST00000503945 MDH1P40925 334 aaKnown RBP10.29□□□□□ -0.76
MED28-203ENST00000503945 CHN2P52757 468 aa10.29□□□□□ -0.76
MED28-203ENST00000503945 MYBPC1Q00872 1141 aa10.29□□□□□ -0.76
MED28-203ENST00000503945 RUNX1T1Q06455 604 aa10.29□□□□□ -0.76
MED28-203ENST00000503945 TAF11Q15544 211 aa10.29□□□□□ -0.76
MED28-203ENST00000503945 FXNQ16595 210 aa10.29□□□□□ -0.76
MED28-203ENST00000503945 MOGQ16653 247 aa10.29□□□□□ -0.76
MED28-203ENST00000503945 CGB2Q6NT52 195 aa10.29□□□□□ -0.76
MED28-203ENST00000503945 UGT2A3Q6UWM9 527 aa10.29□□□□□ -0.76
MED28-203ENST00000503945 FKBP9P1Q75LS8 142 aa10.29□□□□□ -0.76
MED28-203ENST00000503945 RRM2BQ7LG56 351 aa10.29□□□□□ -0.76
MED28-203ENST00000503945 SLC15A3Q8IY34 581 aa10.29□□□□□ -0.76
MED28-203ENST00000503945 LRRC18Q8N456 261 aa10.29□□□□□ -0.76
MED28-203ENST00000503945 POU5F2Q8N7G0 328 aa10.29□□□□□ -0.76
MED28-203ENST00000503945 ARIH2OSQ8N7S6 290 aa10.29□□□□□ -0.76
MED28-203ENST00000503945 ASB10Q8WXI3 467 aa10.29□□□□□ -0.76
MED28-203ENST00000503945 C11orf40Q8WZ69 217 aa10.29□□□□□ -0.76
MED28-203ENST00000503945 RCN3Q96D15 328 aa10.29□□□□□ -0.76
MED28-203ENST00000503945 MSI2Q96DH6 328 aaKnown RBP10.29□□□□□ -0.76
MED28-203ENST00000503945 BPIFA2Q96DR5 249 aa10.29□□□□□ -0.76
MED28-203ENST00000503945 SYT3Q9BQG1 590 aa10.29□□□□□ -0.76
MED28-203ENST00000503945 BPESC1Q9GZL8 116 aa10.29□□□□□ -0.76
MED28-203ENST00000503945 C1orf198Q9H425 327 aa10.29□□□□□ -0.76
MED28-203ENST00000503945 CDH20Q9HBT6 801 aa10.29□□□□□ -0.76
MED28-203ENST00000503945 MED4Q9NPJ6 270 aa10.29□□□□□ -0.76
MED28-203ENST00000503945 ZNF446Q9NWS9 450 aa10.29□□□□□ -0.76
MED28-203ENST00000503945 CMTM6Q9NX76 183 aa10.29□□□□□ -0.76
MED28-203ENST00000503945 IFNW1P05000 195 aa10.28□□□□□ -0.76
MED28-203ENST00000503945 SAGP10523 405 aaPredicted RBP10.28□□□□□ -0.76
MED28-203ENST00000503945 COX4I1P13073 169 aa10.28□□□□□ -0.76
MED28-203ENST00000503945 IFI30P13284 250 aa10.28□□□□□ -0.76
MED28-203ENST00000503945 YAP1P46937 504 aaKnown RBP10.28□□□□□ -0.76
MED28-203ENST00000503945 UCP2P55851 309 aa10.28□□□□□ -0.76
MED28-203ENST00000503945 TMEM33P57088 247 aa10.28□□□□□ -0.76
MED28-203ENST00000503945 SRSF2Q01130 221 aaKnown RBP10.28□□□□□ -0.76
MED28-203ENST00000503945 LIPEQ05469 1076 aa10.28□□□□□ -0.76
MED28-203ENST00000503945 SGCAQ16586 387 aa10.28□□□□□ -0.76
MED28-203ENST00000503945 TBC1D28Q2M2D7 210 aa10.28□□□□□ -0.76
MED28-203ENST00000503945 ALG10Q5BKT4 473 aa10.28□□□□□ -0.76
MED28-203ENST00000503945 THEM4Q5T1C6 240 aa10.28□□□□□ -0.76
MED28-203ENST00000503945 ARMC4Q5T2S8 1044 aa10.28□□□□□ -0.76
MED28-203ENST00000503945 RGS7BPQ6MZT1 257 aaPredicted RBP10.28□□□□□ -0.76
MED28-203ENST00000503945 UNQ6126/PRO20091Q6UXV3 157 aa10.28□□□□□ -0.76
MED28-203ENST00000503945 LRP11Q86VZ4 500 aa10.28□□□□□ -0.76
MED28-203ENST00000503945 ZNF584Q8IVC4 421 aa10.28□□□□□ -0.76
MED28-203ENST00000503945 RNF113BQ8IZP6 322 aaKnown RBP10.28□□□□□ -0.76
MED28-203ENST00000503945 RBM15BQ8NDT2 890 aaKnown RBP10.28□□□□□ -0.76
MED28-203ENST00000503945 MOSPD2Q8NHP6 518 aa10.28□□□□□ -0.76
MED28-203ENST00000503945 FNDC8Q8TC99 324 aa10.28□□□□□ -0.76
MED28-203ENST00000503945 HPS1Q92902 700 aa10.28□□□□□ -0.76
MED28-203ENST00000503945 TXNIPQ9H3M7 391 aa10.28□□□□□ -0.76
MED28-203ENST00000503945 TPK1Q9H3S4 243 aa10.28□□□□□ -0.76
MED28-203ENST00000503945 CCNB1IP1Q9NPC3 277 aa10.28□□□□□ -0.76
MED28-203ENST00000503945 EIF3KQ9UBQ5 218 aaKnown RBP10.28□□□□□ -0.76
MED28-203ENST00000503945 ZNF346Q9UL40 294 aaKnown RBP10.28□□□□□ -0.76
MED28-203ENST00000503945 FZR1Q9UM11 496 aa10.28□□□□□ -0.76
MED28-203ENST00000503945 A4GNTQ9UNA3 340 aa10.28□□□□□ -0.76
MED28-203ENST00000503945 A0A1W2PPW3 197 aa10.27□□□□□ -0.77
MED28-203ENST00000503945 LRP5LA4QPB2 252 aa10.27□□□□□ -0.77
MED28-203ENST00000503945 GMNCA6NCL1 334 aa10.27□□□□□ -0.77
MED28-203ENST00000503945 LYNX1G3V0Z9 82 aa10.27□□□□□ -0.77
MED28-203ENST00000503945 CXCR6O00574 342 aa10.27□□□□□ -0.77
MED28-203ENST00000503945 ZNF682O95780 498 aa10.27□□□□□ -0.77
MED28-203ENST00000503945 LCKP06239 509 aa10.27□□□□□ -0.77
MED28-203ENST00000503945 TSPAN19P0C672 248 aa10.27□□□□□ -0.77
MED28-203ENST00000503945 FAM157BP0CG42 384 aa10.27□□□□□ -0.77
MED28-203ENST00000503945 LYNX1P0DP58 116 aa10.27□□□□□ -0.77
MED28-203ENST00000503945 CCL2P13500 99 aa10.27□□□□□ -0.77
MED28-203ENST00000503945 HNF1AP20823 631 aa10.27□□□□□ -0.77
MED28-203ENST00000503945 CCNOP22674 350 aa10.27□□□□□ -0.77
MED28-203ENST00000503945 COL8A2P25067 703 aa10.27□□□□□ -0.77
MED28-203ENST00000503945 APLNRP35414 380 aa10.27□□□□□ -0.77
MED28-203ENST00000503945 ALDH3B1P43353 468 aa10.27□□□□□ -0.77
MED28-203ENST00000503945 SEC24CP53992 1094 aa10.27□□□□□ -0.77
MED28-203ENST00000503945 CTXN1P60606 82 aa10.27□□□□□ -0.77
MED28-203ENST00000503945 MRPS34P82930 218 aaKnown RBP10.27□□□□□ -0.77
MED28-203ENST00000503945 HSF2Q03933 536 aa10.27□□□□□ -0.77
MED28-203ENST00000503945 PRKCDQ05655 676 aa10.27□□□□□ -0.77
MED28-203ENST00000503945 RIN1Q13671 783 aa10.27□□□□□ -0.77
MED28-203ENST00000503945 TRAM2Q15035 370 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms