RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 MMP7P09237 267 aaPredicted RBP12.26□□□□□ -0.45
VTI1A-209ENST00000496445 TACSTD2P09758 323 aa12.26□□□□□ -0.45
VTI1A-209ENST00000496445 LYNX1P0DP58 116 aa12.26□□□□□ -0.45
VTI1A-209ENST00000496445 CCL2P13500 99 aa12.26□□□□□ -0.45
VTI1A-209ENST00000496445 DAP3P51398 398 aaKnown RBP12.26□□□□□ -0.45
VTI1A-209ENST00000496445 SEC24CP53992 1094 aa12.26□□□□□ -0.45
VTI1A-209ENST00000496445 RPS23P62266 143 aaKnown RBP12.26□□□□□ -0.45
VTI1A-209ENST00000496445 SELENOWP63302 87 aa12.26□□□□□ -0.45
VTI1A-209ENST00000496445 GALK2Q01415 458 aa12.26□□□□□ -0.45
VTI1A-209ENST00000496445 FMODQ06828 376 aa12.26□□□□□ -0.45
VTI1A-209ENST00000496445 RIN1Q13671 783 aa12.26□□□□□ -0.45
VTI1A-209ENST00000496445 TRIP10Q15642 601 aa12.26□□□□□ -0.45
VTI1A-209ENST00000496445 NRN1LQ496H8 165 aa12.26□□□□□ -0.45
VTI1A-209ENST00000496445 GKAP1Q5VSY0 366 aaPredicted RBP12.26□□□□□ -0.45
VTI1A-209ENST00000496445 FAM166AQ6J272 317 aa12.26□□□□□ -0.45
VTI1A-209ENST00000496445 IL17RELQ6ZVW7 336 aa12.26□□□□□ -0.45
VTI1A-209ENST00000496445 SLC16A14Q7RTX9 510 aa12.26□□□□□ -0.45
VTI1A-209ENST00000496445 ZNF786Q8N393 782 aa12.26□□□□□ -0.45
VTI1A-209ENST00000496445 SLC30A7Q8NEW0 376 aa12.26□□□□□ -0.45
VTI1A-209ENST00000496445 UBASH3BQ8TF42 649 aa12.26□□□□□ -0.45
VTI1A-209ENST00000496445 HDAC2Q92769 488 aaKnown RBP12.26□□□□□ -0.45
VTI1A-209ENST00000496445 CHODLQ9H9P2 273 aa12.26□□□□□ -0.45
VTI1A-209ENST00000496445 MAN2C1Q9NTJ4 1040 aa12.26□□□□□ -0.45
VTI1A-209ENST00000496445 HIF3AQ9Y2N7 669 aa12.26□□□□□ -0.45
VTI1A-209ENST00000496445 MED31Q9Y3C7 131 aa12.26□□□□□ -0.45
VTI1A-209ENST00000496445 SPEF1Q9Y4P9 236 aa12.26□□□□□ -0.45
VTI1A-209ENST00000496445 UGT2A1Q9Y4X1 527 aa12.26□□□□□ -0.45
VTI1A-209ENST00000496445 SNX13Q9Y5W8 968 aa12.26□□□□□ -0.45
VTI1A-209ENST00000496445 NPIPB13A6NJU9 1138 aa12.25□□□□□ -0.45
VTI1A-209ENST00000496445 NPIPB4C9JG80 1138 aa12.25□□□□□ -0.45
VTI1A-209ENST00000496445 J3KTA2 159 aa12.25□□□□□ -0.45
VTI1A-209ENST00000496445 NME4O00746 187 aa12.25□□□□□ -0.45
VTI1A-209ENST00000496445 FFAR1O14842 300 aa12.25□□□□□ -0.45
VTI1A-209ENST00000496445 NCR1O76036 304 aa12.25□□□□□ -0.45
VTI1A-209ENST00000496445 IFNA2P01563 188 aa12.25□□□□□ -0.45
VTI1A-209ENST00000496445 HPXP02790 462 aa12.25□□□□□ -0.45
VTI1A-209ENST00000496445 ERCC1P07992 297 aaPredicted RBP12.25□□□□□ -0.45
VTI1A-209ENST00000496445 ACADSP16219 412 aa12.25□□□□□ -0.45
VTI1A-209ENST00000496445 ERVS71-1P61550 626 aa12.25□□□□□ -0.45
VTI1A-209ENST00000496445 LIPEQ05469 1076 aa12.25□□□□□ -0.45
VTI1A-209ENST00000496445 FHL1Q13642 323 aa12.25□□□□□ -0.45
VTI1A-209ENST00000496445 SLC36A2Q495M3 483 aa12.25□□□□□ -0.45
VTI1A-209ENST00000496445 ELFN2Q5R3F8 820 aa12.25□□□□□ -0.45
VTI1A-209ENST00000496445 C8orf82Q6P1X6 216 aaPredicted RBP12.25□□□□□ -0.45
VTI1A-209ENST00000496445 TMEM53Q6P2H8 277 aa12.25□□□□□ -0.45
VTI1A-209ENST00000496445 HDDC2Q7Z4H3 204 aa12.25□□□□□ -0.45
VTI1A-209ENST00000496445 MEX3DQ86XN8 651 aaKnown RBP12.25□□□□□ -0.45
VTI1A-209ENST00000496445 TREML1Q86YW5 311 aa12.25□□□□□ -0.45
VTI1A-209ENST00000496445 SLC15A3Q8IY34 581 aa12.25□□□□□ -0.45
VTI1A-209ENST00000496445 OFCC1Q8IZS5 231 aa12.25□□□□□ -0.45
VTI1A-209ENST00000496445 ZNF540Q8NDQ6 660 aa12.25□□□□□ -0.45
VTI1A-209ENST00000496445 SPATA3Q8NHX4 192 aa12.25□□□□□ -0.45
VTI1A-209ENST00000496445 RP9Q8TA86 221 aaKnown RBP12.25□□□□□ -0.45
VTI1A-209ENST00000496445 NABP1Q96AH0 204 aa12.25□□□□□ -0.45
VTI1A-209ENST00000496445 BEX2Q9BXY8 128 aa12.25□□□□□ -0.45
VTI1A-209ENST00000496445 RHCGQ9UBD6 479 aa12.25□□□□□ -0.45
VTI1A-209ENST00000496445 LPAR3Q9UBY5 353 aa12.25□□□□□ -0.45
VTI1A-209ENST00000496445 REV1Q9UBZ9 1251 aa12.25□□□□□ -0.45
VTI1A-209ENST00000496445 KCNS2Q9ULS6 477 aa12.25□□□□□ -0.45
VTI1A-209ENST00000496445 ENTPD5O75356 428 aa12.24□□□□□ -0.45
VTI1A-209ENST00000496445 IGHMP01871 453 aa12.24□□□□□ -0.45
VTI1A-209ENST00000496445 FAM157BP0CG42 384 aa12.24□□□□□ -0.45
VTI1A-209ENST00000496445 COX4I1P13073 169 aa12.24□□□□□ -0.45
VTI1A-209ENST00000496445 IFI30P13284 250 aa12.24□□□□□ -0.45
VTI1A-209ENST00000496445 TCN1P20061 433 aaPredicted RBP12.24□□□□□ -0.45
VTI1A-209ENST00000496445 MAKP20794 623 aa12.24□□□□□ -0.45
VTI1A-209ENST00000496445 CDAP32320 146 aa12.24□□□□□ -0.45
VTI1A-209ENST00000496445 LSP1P33241 339 aa12.24□□□□□ -0.45
VTI1A-209ENST00000496445 YAP1P46937 504 aaKnown RBP12.24□□□□□ -0.45
VTI1A-209ENST00000496445 ZNF84P51523 738 aa12.24□□□□□ -0.45
VTI1A-209ENST00000496445 SLC7A2P52569 658 aa12.24□□□□□ -0.45
VTI1A-209ENST00000496445 ST3GAL3Q11203 375 aa12.24□□□□□ -0.45
VTI1A-209ENST00000496445 TOP3AQ13472 1001 aaPredicted RBP12.24□□□□□ -0.45
VTI1A-209ENST00000496445 LAPTM4AQ15012 233 aa12.24□□□□□ -0.45
VTI1A-209ENST00000496445 ALG10Q5BKT4 473 aa12.24□□□□□ -0.45
VTI1A-209ENST00000496445 FAM120AOSQ5T036 256 aa12.24□□□□□ -0.45
VTI1A-209ENST00000496445 ARPINQ7Z6K5 226 aa12.24□□□□□ -0.45
VTI1A-209ENST00000496445 DPPA2Q7Z7J5 298 aa12.24□□□□□ -0.45
VTI1A-209ENST00000496445 PHC2Q8IXK0 858 aa12.24□□□□□ -0.45
VTI1A-209ENST00000496445 LRRC18Q8N456 261 aa12.24□□□□□ -0.45
VTI1A-209ENST00000496445 CLDN22Q8N7P3 220 aa12.24□□□□□ -0.45
VTI1A-209ENST00000496445 LRRC75AQ8NAA5 344 aa12.24□□□□□ -0.45
VTI1A-209ENST00000496445 BPIFA2Q96DR5 249 aa12.24□□□□□ -0.45
VTI1A-209ENST00000496445 SNX18Q96RF0 628 aa12.24□□□□□ -0.45
VTI1A-209ENST00000496445 SHARPINQ9H0F6 387 aa12.24□□□□□ -0.45
VTI1A-209ENST00000496445 OR51B6Q9H340 312 aa12.24□□□□□ -0.45
VTI1A-209ENST00000496445 TXNIPQ9H3M7 391 aa12.24□□□□□ -0.45
VTI1A-209ENST00000496445 RNF121Q9H920 327 aa12.24□□□□□ -0.45
VTI1A-209ENST00000496445 TRAV27A0A087WT01 109 aa12.23□□□□□ -0.45
VTI1A-209ENST00000496445 CXCR6O00574 342 aa12.23□□□□□ -0.45
VTI1A-209ENST00000496445 MGRN1O60291 552 aa12.23□□□□□ -0.45
VTI1A-209ENST00000496445 PRSS23O95084 383 aa12.23□□□□□ -0.45
VTI1A-209ENST00000496445 SNAP29O95721 258 aa12.23□□□□□ -0.45
VTI1A-209ENST00000496445 CLPTM1O96005 669 aa12.23□□□□□ -0.45
VTI1A-209ENST00000496445 TGFAP01135 160 aa12.23□□□□□ -0.45
VTI1A-209ENST00000496445 NAT2P11245 290 aa12.23□□□□□ -0.45
VTI1A-209ENST00000496445 MDH1P40925 334 aaKnown RBP12.23□□□□□ -0.45
VTI1A-209ENST00000496445 CHN2P52757 468 aa12.23□□□□□ -0.45
VTI1A-209ENST00000496445 MRPS34P82930 218 aaKnown RBP12.23□□□□□ -0.45
VTI1A-209ENST00000496445 TBC1D28Q2M2D7 210 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms