RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 OR51J1Q9H342 316 aa9.98□□□□□ -0.81
CMSS1-208ENST00000496116 SUSD2Q9UGT4 822 aa9.98□□□□□ -0.81
CMSS1-208ENST00000496116 ING1Q9UK53 422 aaPredicted RBP9.98□□□□□ -0.81
CMSS1-208ENST00000496116 ING4Q9UNL4 249 aa9.98□□□□□ -0.81
CMSS1-208ENST00000496116 FOXJ3Q9UPW0 622 aa9.98□□□□□ -0.81
CMSS1-208ENST00000496116 SIT1Q9Y3P8 196 aa9.98□□□□□ -0.81
CMSS1-208ENST00000496116 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.97□□□□□ -0.81
CMSS1-208ENST00000496116 IGLV1-36A0A0B4J1U3 117 aa9.97□□□□□ -0.81
CMSS1-208ENST00000496116 A0A1B0GTH9 108 aa9.97□□□□□ -0.81
CMSS1-208ENST00000496116 A6NIZ1 184 aa9.97□□□□□ -0.81
CMSS1-208ENST00000496116 SOX1O00570 391 aaPredicted RBP9.97□□□□□ -0.81
CMSS1-208ENST00000496116 KHDRBS3O75525 346 aaKnown RBP9.97□□□□□ -0.81
CMSS1-208ENST00000496116 WISP1O95388 367 aa9.97□□□□□ -0.81
CMSS1-208ENST00000496116 CTLA4P16410 223 aa9.97□□□□□ -0.81
CMSS1-208ENST00000496116 NAGAP17050 411 aa9.97□□□□□ -0.81
CMSS1-208ENST00000496116 ADRA2CP18825 462 aa9.97□□□□□ -0.81
CMSS1-208ENST00000496116 MNDAP41218 407 aa9.97□□□□□ -0.81
CMSS1-208ENST00000496116 DHPSP49366 369 aaPredicted RBP9.97□□□□□ -0.81
CMSS1-208ENST00000496116 DAP3P51398 398 aaKnown RBP9.97□□□□□ -0.81
CMSS1-208ENST00000496116 RIDAP52758 137 aaKnown RBP9.97□□□□□ -0.81
CMSS1-208ENST00000496116 FBXW4P57775 412 aa9.97□□□□□ -0.81
CMSS1-208ENST00000496116 RAP1BP61224 184 aa9.97□□□□□ -0.81
CMSS1-208ENST00000496116 RAP1AP62834 184 aa9.97□□□□□ -0.81
CMSS1-208ENST00000496116 ROM1Q03395 351 aa9.97□□□□□ -0.81
CMSS1-208ENST00000496116 MELKQ14680 651 aa9.97□□□□□ -0.81
CMSS1-208ENST00000496116 FCN2Q15485 313 aa9.97□□□□□ -0.81
CMSS1-208ENST00000496116 ODF4Q2M2E3 257 aa9.97□□□□□ -0.81
CMSS1-208ENST00000496116 TEX30Q5JUR7 227 aa9.97□□□□□ -0.81
CMSS1-208ENST00000496116 OR5M10Q6IEU7 315 aa9.97□□□□□ -0.81
CMSS1-208ENST00000496116 MTFR2Q6P444 385 aa9.97□□□□□ -0.81
CMSS1-208ENST00000496116 PAPD4Q6PIY7 484 aaKnown RBP9.97□□□□□ -0.81
CMSS1-208ENST00000496116 SLC35D2Q76EJ3 337 aa9.97□□□□□ -0.81
CMSS1-208ENST00000496116 TMPRSS9Q7Z410 1059 aa9.97□□□□□ -0.81
CMSS1-208ENST00000496116 SERPINA12Q8IW75 414 aa9.97□□□□□ -0.81
CMSS1-208ENST00000496116 ZNF454Q8N9F8 522 aa9.97□□□□□ -0.81
CMSS1-208ENST00000496116 NFAM1Q8NET5 270 aaPredicted RBP9.97□□□□□ -0.81
CMSS1-208ENST00000496116 MFSD8Q8NHS3 518 aa9.97□□□□□ -0.81
CMSS1-208ENST00000496116 RNF128Q8TEB7 428 aa9.97□□□□□ -0.81
CMSS1-208ENST00000496116 THAP3Q8WTV1 239 aaPredicted RBP9.97□□□□□ -0.81
CMSS1-208ENST00000496116 DDIT4LQ96D03 193 aa9.97□□□□□ -0.81
CMSS1-208ENST00000496116 AMELYQ99218 206 aa9.97□□□□□ -0.81
CMSS1-208ENST00000496116 MRPL22Q9NWU5 206 aaKnown RBP9.97□□□□□ -0.81
CMSS1-208ENST00000496116 STEAP1Q9UHE8 339 aa9.97□□□□□ -0.81
CMSS1-208ENST00000496116 CDV3Q9UKY7 258 aaKnown RBP9.97□□□□□ -0.81
CMSS1-208ENST00000496116 PPIEQ9UNP9 301 aaKnown RBP9.97□□□□□ -0.81
CMSS1-208ENST00000496116 RCE1Q9Y256 329 aa9.97□□□□□ -0.81
CMSS1-208ENST00000496116 CPAMD8Q8IZJ3 1885 aa9.97□□□□□ -0.81
CMSS1-208ENST00000496116 SDK1Q7Z5N4 2213 aa9.97□□□□□ -0.81
CMSS1-208ENST00000496116 TRBV11-1A0A0K0K1C0 115 aa9.97□□□□□ -0.81
CMSS1-208ENST00000496116 FTCDNL1E5RQL4 147 aa9.97□□□□□ -0.81
CMSS1-208ENST00000496116 NPIPA5E9PKD4 350 aa9.97□□□□□ -0.81
CMSS1-208ENST00000496116 ACOT7O00154 380 aa9.97□□□□□ -0.81
CMSS1-208ENST00000496116 ANXA3P12429 323 aa9.97□□□□□ -0.81
CMSS1-208ENST00000496116 CCKBRP32239 447 aa9.97□□□□□ -0.81
CMSS1-208ENST00000496116 KIR3DL2P43630 455 aa9.97□□□□□ -0.81
CMSS1-208ENST00000496116 MAP2K6P52564 334 aa9.97□□□□□ -0.81
CMSS1-208ENST00000496116 FOXL2P58012 376 aa9.97□□□□□ -0.81
CMSS1-208ENST00000496116 DMWDQ09019 674 aa9.97□□□□□ -0.81
CMSS1-208ENST00000496116 ZP4Q12836 540 aa9.97□□□□□ -0.81
CMSS1-208ENST00000496116 EIF2B1Q14232 305 aaKnown RBP9.97□□□□□ -0.81
CMSS1-208ENST00000496116 GSG1Q2KHT4 349 aa9.97□□□□□ -0.81
CMSS1-208ENST00000496116 FAM205BPQ63HN1 556 aa9.97□□□□□ -0.81
CMSS1-208ENST00000496116 GUSBP11Q6P575 273 aa9.97□□□□□ -0.81
CMSS1-208ENST00000496116 FGD2Q7Z6J4 655 aa9.97□□□□□ -0.81
CMSS1-208ENST00000496116 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.97□□□□□ -0.81
CMSS1-208ENST00000496116 SLC38A9Q8NBW4 561 aa9.97□□□□□ -0.81
CMSS1-208ENST00000496116 OR51A4Q8NGJ6 313 aa9.97□□□□□ -0.81
CMSS1-208ENST00000496116 OR8K3Q8NH51 312 aa9.97□□□□□ -0.81
CMSS1-208ENST00000496116 OR52I2Q8NH67 350 aa9.97□□□□□ -0.81
CMSS1-208ENST00000496116 LILRB4Q8NHJ6 448 aa9.97□□□□□ -0.81
CMSS1-208ENST00000496116 TTC9Q92623 222 aa9.97□□□□□ -0.81
CMSS1-208ENST00000496116 MCHR2Q969V1 340 aa9.97□□□□□ -0.81
CMSS1-208ENST00000496116 DACT3Q96B18 629 aaPredicted RBP9.97□□□□□ -0.81
CMSS1-208ENST00000496116 FOXN4Q96NZ1 517 aa9.97□□□□□ -0.81
CMSS1-208ENST00000496116 PRO3102Q9H379 93 aa9.97□□□□□ -0.81
CMSS1-208ENST00000496116 RANBP3Q9H6Z4 567 aaPredicted RBP9.97□□□□□ -0.81
CMSS1-208ENST00000496116 EMC7Q9NPA0 242 aa9.97□□□□□ -0.81
CMSS1-208ENST00000496116 EMC3Q9P0I2 261 aa9.97□□□□□ -0.81
CMSS1-208ENST00000496116 ZNF222Q9UK12 451 aa9.97□□□□□ -0.81
CMSS1-208ENST00000496116 NPIPA1Q9UND3 350 aa9.97□□□□□ -0.81
CMSS1-208ENST00000496116 GTF2A1LQ9UNN4 478 aa9.97□□□□□ -0.81
CMSS1-208ENST00000496116 EXPH5Q8NEV8 1989 aa9.96□□□□□ -0.81
CMSS1-208ENST00000496116 TRAV8-7A0A075B6U6 113 aa9.96□□□□□ -0.82
CMSS1-208ENST00000496116 VSTM2BA6NLU5 285 aa9.96□□□□□ -0.82
CMSS1-208ENST00000496116 ADAM10O14672 748 aa9.96□□□□□ -0.82
CMSS1-208ENST00000496116 ZNF208O43345 1280 aa9.96□□□□□ -0.82
CMSS1-208ENST00000496116 CDK2P24941 298 aa9.96□□□□□ -0.82
CMSS1-208ENST00000496116 CFPP27918 469 aa9.96□□□□□ -0.82
CMSS1-208ENST00000496116 PTH2RP49190 550 aa9.96□□□□□ -0.82
CMSS1-208ENST00000496116 EMP2P54851 167 aa9.96□□□□□ -0.82
CMSS1-208ENST00000496116 C16orf47Q6ZP98 133 aaPredicted RBP9.96□□□□□ -0.82
CMSS1-208ENST00000496116 H1FNTQ75WM6 255 aaPredicted RBP9.96□□□□□ -0.82
CMSS1-208ENST00000496116 LUZP2Q86TE4 346 aa9.96□□□□□ -0.82
CMSS1-208ENST00000496116 DNAAF1Q8NEP3 725 aa9.96□□□□□ -0.82
CMSS1-208ENST00000496116 OR10AC1Q8NH08 325 aa9.96□□□□□ -0.82
CMSS1-208ENST00000496116 GIMAP1Q8WWP7 306 aa9.96□□□□□ -0.82
CMSS1-208ENST00000496116 HGDQ93099 445 aa9.96□□□□□ -0.82
CMSS1-208ENST00000496116 ULBP3Q9BZM4 244 aa9.96□□□□□ -0.82
CMSS1-208ENST00000496116 C20orf85Q9H1P6 137 aa9.96□□□□□ -0.82
CMSS1-208ENST00000496116 HRASLSQ9HDD0 168 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms