RNA–Protein interactions for RNA: ENST00000494412.1

CMSS1-207, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 2

Gene CMSS1, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-207ENST00000494412 TMEM54Q969K7 222 aa3.12□□□□□ -1.91
CMSS1-207ENST00000494412 DUS3LQ96G46 650 aaKnown RBP3.12□□□□□ -1.91
CMSS1-207ENST00000494412 OPALINQ96PE5 141 aa3.12□□□□□ -1.91
CMSS1-207ENST00000494412 RHOXF2Q9BQY4 288 aa3.12□□□□□ -1.91
CMSS1-207ENST00000494412 ZYG11BQ9C0D3 744 aa3.12□□□□□ -1.91
CMSS1-207ENST00000494412 ZC4H2Q9NQZ6 224 aa3.12□□□□□ -1.91
CMSS1-207ENST00000494412 AGPAT3Q9NRZ7 376 aa3.12□□□□□ -1.91
CMSS1-207ENST00000494412 ZNF275Q9NSD4 429 aaPredicted RBP3.12□□□□□ -1.91
CMSS1-207ENST00000494412 Q9UF83 564 aa3.12□□□□□ -1.91
CMSS1-207ENST00000494412 CDH10Q9Y6N8 788 aa3.12□□□□□ -1.91
CMSS1-207ENST00000494412 CLASP1Q7Z460 1538 aa3.11□□□□□ -1.91
CMSS1-207ENST00000494412 A0A0J9YYE9 177 aa3.11□□□□□ -1.91
CMSS1-207ENST00000494412 A0A1B0GUH1 482 aa3.11□□□□□ -1.91
CMSS1-207ENST00000494412 A0A1B0GW55 424 aa3.11□□□□□ -1.91
CMSS1-207ENST00000494412 A0A1W2PRD5 423 aa3.11□□□□□ -1.91
CMSS1-207ENST00000494412 M0QX08 132 aa3.11□□□□□ -1.91
CMSS1-207ENST00000494412 NEMFO60524 1076 aa3.11□□□□□ -1.91
CMSS1-207ENST00000494412 SNAI1O95863 264 aaPredicted RBP3.11□□□□□ -1.91
CMSS1-207ENST00000494412 PAHP00439 452 aa3.11□□□□□ -1.91
CMSS1-207ENST00000494412 TRBC1P01850 177 aa3.11□□□□□ -1.91
CMSS1-207ENST00000494412 KRT16P08779 473 aa3.11□□□□□ -1.91
CMSS1-207ENST00000494412 CLTAP09496 248 aa3.11□□□□□ -1.91
CMSS1-207ENST00000494412 DUX4L2P0CJ85 424 aa3.11□□□□□ -1.91
CMSS1-207ENST00000494412 DUX4L3P0CJ86 424 aa3.11□□□□□ -1.91
CMSS1-207ENST00000494412 DUX4L4P0CJ87 422 aa3.11□□□□□ -1.91
CMSS1-207ENST00000494412 DUX4L5P0CJ88 424 aa3.11□□□□□ -1.91
CMSS1-207ENST00000494412 DUX4L6P0CJ89 424 aa3.11□□□□□ -1.91
CMSS1-207ENST00000494412 DUX4L7P0CJ90 424 aa3.11□□□□□ -1.91
CMSS1-207ENST00000494412 COX7A1P24310 79 aa3.11□□□□□ -1.91
CMSS1-207ENST00000494412 OR1E1P30953 314 aa3.11□□□□□ -1.91
CMSS1-207ENST00000494412 LONP1P36776 959 aaKnown RBP3.11□□□□□ -1.91
CMSS1-207ENST00000494412 HADHBP55084 474 aaKnown RBP3.11□□□□□ -1.91
CMSS1-207ENST00000494412 CLDN18P56856 261 aa3.11□□□□□ -1.91
CMSS1-207ENST00000494412 STXBP1P61764 594 aaKnown RBP3.11□□□□□ -1.91
CMSS1-207ENST00000494412 STK38Q15208 465 aa3.11□□□□□ -1.91
CMSS1-207ENST00000494412 PSMD5Q16401 504 aa3.11□□□□□ -1.91
CMSS1-207ENST00000494412 KYAT1Q16773 422 aa3.11□□□□□ -1.91
CMSS1-207ENST00000494412 C15orf32Q32M92 178 aa3.11□□□□□ -1.91
CMSS1-207ENST00000494412 GPR107Q5VW38 600 aa3.11□□□□□ -1.91
CMSS1-207ENST00000494412 MLIPQ5VWP3 458 aa3.11□□□□□ -1.91
CMSS1-207ENST00000494412 H3F3CQ6NXT2 135 aa3.11□□□□□ -1.91
CMSS1-207ENST00000494412 DUX4L9Q6RFH8 374 aaPredicted RBP3.11□□□□□ -1.91
CMSS1-207ENST00000494412 SCARA5Q6ZMJ2 495 aa3.11□□□□□ -1.91
CMSS1-207ENST00000494412 MBOAT1Q6ZNC8 495 aa3.11□□□□□ -1.91
CMSS1-207ENST00000494412 MRPL21Q7Z2W9 205 aaKnown RBP3.11□□□□□ -1.91
CMSS1-207ENST00000494412 TMEM135Q86UB9 458 aa3.11□□□□□ -1.91
CMSS1-207ENST00000494412 THOC6Q86W42 341 aaKnown RBP3.11□□□□□ -1.91
CMSS1-207ENST00000494412 NKAPP1Q8N9T2 125 aa3.11□□□□□ -1.91
CMSS1-207ENST00000494412 MAPK1IP1LQ8NDC0 245 aa3.11□□□□□ -1.91
CMSS1-207ENST00000494412 OR56A4Q8NGH8 313 aa3.11□□□□□ -1.91
CMSS1-207ENST00000494412 CD300LFQ8TDQ1 290 aa3.11□□□□□ -1.91
CMSS1-207ENST00000494412 TOP1MTQ969P6 601 aa3.11□□□□□ -1.91
CMSS1-207ENST00000494412 MARC2Q969Z3 335 aa3.11□□□□□ -1.91
CMSS1-207ENST00000494412 APH1AQ96BI3 265 aa3.11□□□□□ -1.91
CMSS1-207ENST00000494412 RPUSD4Q96CM3 377 aaKnown RBP3.11□□□□□ -1.91
CMSS1-207ENST00000494412 CSPG4P5Q96PW8 444 aa3.11□□□□□ -1.91
CMSS1-207ENST00000494412 UBXN6Q9BZV1 441 aa3.11□□□□□ -1.91
CMSS1-207ENST00000494412 SRMSQ9H3Y6 488 aa3.11□□□□□ -1.91
CMSS1-207ENST00000494412 SLC25A22Q9H936 323 aa3.11□□□□□ -1.91
CMSS1-207ENST00000494412 SH2D2AQ9NP31 389 aa3.11□□□□□ -1.91
CMSS1-207ENST00000494412 KCNJ16Q9NPI9 418 aa3.11□□□□□ -1.91
CMSS1-207ENST00000494412 DUX4Q9UBX2 424 aa3.11□□□□□ -1.91
CMSS1-207ENST00000494412 LGALS13Q9UHV8 139 aa3.11□□□□□ -1.91
CMSS1-207ENST00000494412 DDX19BQ9UMR2 479 aa3.11□□□□□ -1.91
CMSS1-207ENST00000494412 MOKQ9UQ07 419 aa3.11□□□□□ -1.91
CMSS1-207ENST00000494412 AKNAQ7Z591 1439 aa3.1□□□□□ -1.91
CMSS1-207ENST00000494412 NEURL4Q96JN8 1562 aa3.1□□□□□ -1.91
CMSS1-207ENST00000494412 A0A0J9YXY3 114 aa3.1□□□□□ -1.91
CMSS1-207ENST00000494412 ZNF726A6NNF4 738 aa3.1□□□□□ -1.91
CMSS1-207ENST00000494412 LYRM9A8MSI8 78 aa3.1□□□□□ -1.91
CMSS1-207ENST00000494412 SLC9A3R1O14745 358 aaPredicted RBP3.1□□□□□ -1.91
CMSS1-207ENST00000494412 HSBP1O75506 76 aa3.1□□□□□ -1.91
CMSS1-207ENST00000494412 CLDN11O75508 207 aa3.1□□□□□ -1.91
CMSS1-207ENST00000494412 BBOX1O75936 387 aa3.1□□□□□ -1.91
CMSS1-207ENST00000494412 TIMP1P01033 207 aa3.1□□□□□ -1.91
CMSS1-207ENST00000494412 HSPB1P04792 205 aaKnown RBP3.1□□□□□ -1.91
CMSS1-207ENST00000494412 GIG44P09565 113 aaPredicted RBP3.1□□□□□ -1.91
CMSS1-207ENST00000494412 UBTFL6P0CB48 400 aaPredicted RBP3.1□□□□□ -1.91
CMSS1-207ENST00000494412 CALM1P0DP23 149 aa3.1□□□□□ -1.91
CMSS1-207ENST00000494412 CALM2P0DP24 149 aa3.1□□□□□ -1.91
CMSS1-207ENST00000494412 CALM3P0DP25 149 aa3.1□□□□□ -1.91
CMSS1-207ENST00000494412 FOLR1P15328 257 aa3.1□□□□□ -1.91
CMSS1-207ENST00000494412 CTRB1P17538 263 aa3.1□□□□□ -1.91
CMSS1-207ENST00000494412 APOC4P55056 127 aa3.1□□□□□ -1.91
CMSS1-207ENST00000494412 RPS15AP62244 130 aaKnown RBP3.1□□□□□ -1.91
CMSS1-207ENST00000494412 LCN2P80188 198 aa3.1□□□□□ -1.91
CMSS1-207ENST00000494412 XIAPP98170 497 aa3.1□□□□□ -1.91
CMSS1-207ENST00000494412 DMTNQ08495 405 aa3.1□□□□□ -1.91
CMSS1-207ENST00000494412 TWF1Q12792 350 aa3.1□□□□□ -1.91
CMSS1-207ENST00000494412 KIAA0040Q15053 153 aa3.1□□□□□ -1.91
CMSS1-207ENST00000494412 NCF4Q15080 339 aa3.1□□□□□ -1.91
CMSS1-207ENST00000494412 STK11Q15831 433 aa3.1□□□□□ -1.91
CMSS1-207ENST00000494412 GABRA6Q16445 453 aa3.1□□□□□ -1.91
CMSS1-207ENST00000494412 KCTD19Q17RG1 926 aaPredicted RBP3.1□□□□□ -1.91
CMSS1-207ENST00000494412 CTRB2Q6GPI1 263 aa3.1□□□□□ -1.91
CMSS1-207ENST00000494412 LCN12Q6JVE5 192 aa3.1□□□□□ -1.91
CMSS1-207ENST00000494412 ULK3Q6PHR2 472 aa3.1□□□□□ -1.91
CMSS1-207ENST00000494412 FAM122BQ7Z309 247 aa3.1□□□□□ -1.91
CMSS1-207ENST00000494412 MYOCDQ8IZQ8 938 aa3.1□□□□□ -1.91
CMSS1-207ENST00000494412 ZADH2Q8N4Q0 377 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms