RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 ACTR3P61158 418 aa2.13□□□□□ -2.07
SMC4-223ENST00000493695 MRPS22P82650 360 aaKnown RBP2.13□□□□□ -2.07
SMC4-223ENST00000493695 GGTLC2Q14390 218 aa2.13□□□□□ -2.07
SMC4-223ENST00000493695 DEFB116Q30KQ4 102 aa2.13□□□□□ -2.07
SMC4-223ENST00000493695 RABL6Q3YEC7 729 aaPredicted RBP2.13□□□□□ -2.07
SMC4-223ENST00000493695 IGFL1Q6UW32 110 aa2.13□□□□□ -2.07
SMC4-223ENST00000493695 NBPF5PQ86XG9 351 aaPredicted RBP2.13□□□□□ -2.07
SMC4-223ENST00000493695 KRTAP13-1Q8IUC0 172 aa2.13□□□□□ -2.07
SMC4-223ENST00000493695 UBE2J2Q8N2K1 259 aa2.13□□□□□ -2.07
SMC4-223ENST00000493695 RNF182Q8N6D2 247 aa2.13□□□□□ -2.07
SMC4-223ENST00000493695 OR10G4Q8NGN3 311 aa2.13□□□□□ -2.07
SMC4-223ENST00000493695 SLC22A8Q8TCC7 542 aa2.13□□□□□ -2.07
SMC4-223ENST00000493695 SDR42E1Q8WUS8 393 aa2.13□□□□□ -2.07
SMC4-223ENST00000493695 STARD8Q92502 1023 aa2.13□□□□□ -2.07
SMC4-223ENST00000493695 STMN2Q93045 179 aa2.13□□□□□ -2.07
SMC4-223ENST00000493695 DNAJC19Q96DA6 116 aa2.13□□□□□ -2.07
SMC4-223ENST00000493695 MED8Q96G25 268 aa2.13□□□□□ -2.07
SMC4-223ENST00000493695 TCHPQ9BT92 498 aa2.13□□□□□ -2.07
SMC4-223ENST00000493695 GABARAPL3Q9BY60 117 aa2.13□□□□□ -2.07
SMC4-223ENST00000493695 SLC40A1Q9NP59 571 aa2.13□□□□□ -2.07
SMC4-223ENST00000493695 PISDQ9UG56 409 aa2.13□□□□□ -2.07
SMC4-223ENST00000493695 SHPKQ9UHJ6 478 aa2.13□□□□□ -2.07
SMC4-223ENST00000493695 CD84Q9UIB8 345 aa2.13□□□□□ -2.07
SMC4-223ENST00000493695 AKNAQ7Z591 1439 aa2.12□□□□□ -2.07
SMC4-223ENST00000493695 IGHV3-66A0A0C4DH42 116 aa2.12□□□□□ -2.07
SMC4-223ENST00000493695 XKRY2A2RUG3 117 aa2.12□□□□□ -2.07
SMC4-223ENST00000493695 SPECC1L-ADORA2AF8WAN1 911 aa2.12□□□□□ -2.07
SMC4-223ENST00000493695 GOSR2O14653 212 aa2.12□□□□□ -2.07
SMC4-223ENST00000493695 ERLIN2O94905 339 aa2.12□□□□□ -2.07
SMC4-223ENST00000493695 UTS2O95399 124 aa2.12□□□□□ -2.07
SMC4-223ENST00000493695 SERPIND1P05546 499 aa2.12□□□□□ -2.07
SMC4-223ENST00000493695 PLEKP08567 350 aaPredicted RBP2.12□□□□□ -2.07
SMC4-223ENST00000493695 NCF2P19878 526 aaPredicted RBP2.12□□□□□ -2.07
SMC4-223ENST00000493695 CNR1P21554 472 aa2.12□□□□□ -2.07
SMC4-223ENST00000493695 SLC2A5P22732 501 aa2.12□□□□□ -2.07
SMC4-223ENST00000493695 IFNA8P32881 189 aa2.12□□□□□ -2.07
SMC4-223ENST00000493695 SERPINB5P36952 375 aa2.12□□□□□ -2.07
SMC4-223ENST00000493695 AQP2P41181 271 aa2.12□□□□□ -2.07
SMC4-223ENST00000493695 RORCP51449 518 aa2.12□□□□□ -2.07
SMC4-223ENST00000493695 ATP5IP56385 69 aaPredicted RBP2.12□□□□□ -2.07
SMC4-223ENST00000493695 SSX2Q16385 188 aa2.12□□□□□ -2.07
SMC4-223ENST00000493695 FAM83EQ2M2I3 478 aa2.12□□□□□ -2.07
SMC4-223ENST00000493695 SPECC1LQ69YQ0 1117 aa2.12□□□□□ -2.07
SMC4-223ENST00000493695 Q6ZR03 302 aa2.12□□□□□ -2.07
SMC4-223ENST00000493695 STRADAQ7RTN6 431 aa2.12□□□□□ -2.07
SMC4-223ENST00000493695 LRP11Q86VZ4 500 aa2.12□□□□□ -2.07
SMC4-223ENST00000493695 CEP112Q8N8E3 955 aa2.12□□□□□ -2.07
SMC4-223ENST00000493695 NECAB1Q8N987 351 aa2.12□□□□□ -2.07
SMC4-223ENST00000493695 CCDC54Q8NEL0 328 aa2.12□□□□□ -2.07
SMC4-223ENST00000493695 OR1S2Q8NGQ3 325 aa2.12□□□□□ -2.07
SMC4-223ENST00000493695 OR10R2Q8NGX6 335 aa2.12□□□□□ -2.07
SMC4-223ENST00000493695 SLC2A14Q8TDB8 520 aa2.12□□□□□ -2.07
SMC4-223ENST00000493695 GPR151Q8TDV0 419 aa2.12□□□□□ -2.07
SMC4-223ENST00000493695 GEMIN6Q8WXD5 167 aaKnown RBP2.12□□□□□ -2.07
SMC4-223ENST00000493695 TPD52L3Q96J77 140 aa2.12□□□□□ -2.07
SMC4-223ENST00000493695 TSNARE1Q96NA8 513 aa2.12□□□□□ -2.07
SMC4-223ENST00000493695 PLA2G12AQ9BZM1 189 aa2.12□□□□□ -2.07
SMC4-223ENST00000493695 PKIBQ9C010 78 aa2.12□□□□□ -2.07
SMC4-223ENST00000493695 ILKAPQ9H0C8 392 aaPredicted RBP2.12□□□□□ -2.07
SMC4-223ENST00000493695 KLHL28Q9NXS3 571 aa2.12□□□□□ -2.07
SMC4-223ENST00000493695 HPCAL4Q9UM19 191 aa2.12□□□□□ -2.07
SMC4-223ENST00000493695 A0A1B0GVX0 72 aa2.11□□□□□ -2.07
SMC4-223ENST00000493695 TSPAN13O95857 204 aa2.11□□□□□ -2.07
SMC4-223ENST00000493695 AK4P27144 223 aaPredicted RBP2.11□□□□□ -2.07
SMC4-223ENST00000493695 HRH1P35367 487 aa2.11□□□□□ -2.07
SMC4-223ENST00000493695 SSR4P51571 173 aa2.11□□□□□ -2.07
SMC4-223ENST00000493695 SLC7A9P82251 487 aa2.11□□□□□ -2.07
SMC4-223ENST00000493695 POU2AF1Q16633 256 aa2.11□□□□□ -2.07
SMC4-223ENST00000493695 ZBED5Q49AG3 693 aa2.11□□□□□ -2.07
SMC4-223ENST00000493695 ZNF493Q6ZR52 646 aa2.11□□□□□ -2.07
SMC4-223ENST00000493695 FAM92BQ6ZTR7 304 aa2.11□□□□□ -2.07
SMC4-223ENST00000493695 TMEM179Q6ZVK1 233 aa2.11□□□□□ -2.07
SMC4-223ENST00000493695 ASCL5Q7RTU5 278 aa2.11□□□□□ -2.07
SMC4-223ENST00000493695 ABHD12BQ7Z5M8 362 aaPredicted RBP2.11□□□□□ -2.07
SMC4-223ENST00000493695 SLC22A9Q8IVM8 553 aa2.11□□□□□ -2.07
SMC4-223ENST00000493695 ZNF547Q8IVP9 402 aa2.11□□□□□ -2.07
SMC4-223ENST00000493695 MREGQ8N565 214 aa2.11□□□□□ -2.07
SMC4-223ENST00000493695 FAM86B1Q8N7N1 296 aa2.11□□□□□ -2.07
SMC4-223ENST00000493695 NOXO1Q8NFA2 376 aa2.11□□□□□ -2.07
SMC4-223ENST00000493695 OR4S2Q8NH73 311 aa2.11□□□□□ -2.07
SMC4-223ENST00000493695 PIK3IP1Q96FE7 263 aa2.11□□□□□ -2.07
SMC4-223ENST00000493695 FOPNLQ96NB1 174 aa2.11□□□□□ -2.07
SMC4-223ENST00000493695 OR2A5Q96R48 311 aa2.11□□□□□ -2.07
SMC4-223ENST00000493695 PLA2G2FQ9BZM2 168 aa2.11□□□□□ -2.07
SMC4-223ENST00000493695 NEUROG2Q9H2A3 272 aa2.11□□□□□ -2.07
SMC4-223ENST00000493695 NOX3Q9HBY0 568 aa2.11□□□□□ -2.07
SMC4-223ENST00000493695 WFDC1Q9HC57 220 aa2.11□□□□□ -2.07
SMC4-223ENST00000493695 INPP5EQ9NRR6 644 aa2.11□□□□□ -2.07
SMC4-223ENST00000493695 SLC2A8Q9NY64 477 aa2.11□□□□□ -2.07
SMC4-223ENST00000493695 PSG8Q9UQ74 426 aa2.11□□□□□ -2.07
SMC4-223ENST00000493695 STARD10Q9Y365 291 aa2.11□□□□□ -2.07
SMC4-223ENST00000493695 IGHV5-51A0A0C4DH38 117 aa2.1□□□□□ -2.07
SMC4-223ENST00000493695 ZNF716A6NP11 495 aa2.1□□□□□ -2.07
SMC4-223ENST00000493695 ZNF735P0CB33 412 aa2.1□□□□□ -2.07
SMC4-223ENST00000493695 HNRNPH3P31942 346 aaKnown RBP2.1□□□□□ -2.07
SMC4-223ENST00000493695 LONP1P36776 959 aaKnown RBP2.1□□□□□ -2.07
SMC4-223ENST00000493695 NSG1P42857 185 aa2.1□□□□□ -2.07
SMC4-223ENST00000493695 CDKN1BP46527 198 aa2.1□□□□□ -2.07
SMC4-223ENST00000493695 CCNHP51946 323 aaPredicted RBP2.1□□□□□ -2.07
SMC4-223ENST00000493695 IDI1Q13907 227 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms