RNA–Protein interactions for RNA: ENST00000493618.5

ATG4B-223, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-223ENST00000493618 DENND2DQ9H6A0 471 aaPredicted RBP12.58□□□□□ -0.4
ATG4B-223ENST00000493618 NARFLQ9H6Q4 476 aa12.58□□□□□ -0.4
ATG4B-223ENST00000493618 INIPQ9NRY2 104 aa12.58□□□□□ -0.4
ATG4B-223ENST00000493618 SLC7A8Q9UHI5 535 aa12.58□□□□□ -0.4
ATG4B-223ENST00000493618 FBXL3Q9UKT7 428 aa12.58□□□□□ -0.4
ATG4B-223ENST00000493618 FAM220BPB1ANY3 271 aa12.57□□□□□ -0.4
ATG4B-223ENST00000493618 CLPTM1O96005 669 aa12.57□□□□□ -0.4
ATG4B-223ENST00000493618 TACSTD2P09758 323 aa12.57□□□□□ -0.4
ATG4B-223ENST00000493618 ACADSP16219 412 aa12.57□□□□□ -0.4
ATG4B-223ENST00000493618 CDAP32320 146 aa12.57□□□□□ -0.4
ATG4B-223ENST00000493618 RBM34P42696 430 aaKnown RBP12.57□□□□□ -0.4
ATG4B-223ENST00000493618 YAP1P46937 504 aaKnown RBP12.57□□□□□ -0.4
ATG4B-223ENST00000493618 EVX1P49640 407 aa12.57□□□□□ -0.4
ATG4B-223ENST00000493618 ZNF84P51523 738 aa12.57□□□□□ -0.4
ATG4B-223ENST00000493618 ERVS71-1P61550 626 aa12.57□□□□□ -0.4
ATG4B-223ENST00000493618 RPS23P62266 143 aaKnown RBP12.57□□□□□ -0.4
ATG4B-223ENST00000493618 GUCY1A3Q02108 690 aa12.57□□□□□ -0.4
ATG4B-223ENST00000493618 TOP3AQ13472 1001 aaPredicted RBP12.57□□□□□ -0.4
ATG4B-223ENST00000493618 RIN1Q13671 783 aa12.57□□□□□ -0.4
ATG4B-223ENST00000493618 LAPTM4AQ15012 233 aa12.57□□□□□ -0.4
ATG4B-223ENST00000493618 CR1LQ2VPA4 569 aa12.57□□□□□ -0.4
ATG4B-223ENST00000493618 COQ5Q5HYK3 327 aa12.57□□□□□ -0.4
ATG4B-223ENST00000493618 RGS7BPQ6MZT1 257 aaPredicted RBP12.57□□□□□ -0.4
ATG4B-223ENST00000493618 ICA1LQ8NDH6 482 aa12.57□□□□□ -0.4
ATG4B-223ENST00000493618 NSMAFQ92636 917 aa12.57□□□□□ -0.4
ATG4B-223ENST00000493618 RCN3Q96D15 328 aa12.57□□□□□ -0.4
ATG4B-223ENST00000493618 TSPAN32Q96QS1 320 aa12.57□□□□□ -0.4
ATG4B-223ENST00000493618 CDH20Q9HBT6 801 aa12.57□□□□□ -0.4
ATG4B-223ENST00000493618 ARMCX1Q9P291 453 aa12.57□□□□□ -0.4
ATG4B-223ENST00000493618 RHCGQ9UBD6 479 aa12.57□□□□□ -0.4
ATG4B-223ENST00000493618 IGKV1D-43A0A0B4J1Z2 117 aa12.56□□□□□ -0.4
ATG4B-223ENST00000493618 NCR1O76036 304 aa12.56□□□□□ -0.4
ATG4B-223ENST00000493618 NPPAP01160 153 aa12.56□□□□□ -0.4
ATG4B-223ENST00000493618 IFNA14P01570 189 aa12.56□□□□□ -0.4
ATG4B-223ENST00000493618 LCKP06239 509 aa12.56□□□□□ -0.4
ATG4B-223ENST00000493618 KDELR2P33947 212 aa12.56□□□□□ -0.4
ATG4B-223ENST00000493618 DAP3P51398 398 aaKnown RBP12.56□□□□□ -0.4
ATG4B-223ENST00000493618 FMODQ06828 376 aa12.56□□□□□ -0.4
ATG4B-223ENST00000493618 HIST3H3Q16695 136 aa12.56□□□□□ -0.4
ATG4B-223ENST00000493618 KRTAP24-1Q3LI83 254 aa12.56□□□□□ -0.4
ATG4B-223ENST00000493618 SLC36A2Q495M3 483 aa12.56□□□□□ -0.4
ATG4B-223ENST00000493618 IGFN1Q86VF2 1251 aa12.56□□□□□ -0.4
ATG4B-223ENST00000493618 MICU2Q8IYU8 434 aa12.56□□□□□ -0.4
ATG4B-223ENST00000493618 PCYOX1LQ8NBM8 494 aa12.56□□□□□ -0.4
ATG4B-223ENST00000493618 RBM15BQ8NDT2 890 aaKnown RBP12.56□□□□□ -0.4
ATG4B-223ENST00000493618 OR2T12Q8NG77 320 aa12.56□□□□□ -0.4
ATG4B-223ENST00000493618 HDAC2Q92769 488 aaKnown RBP12.56□□□□□ -0.4
ATG4B-223ENST00000493618 YIPF5Q969M3 257 aa12.56□□□□□ -0.4
ATG4B-223ENST00000493618 MRPL13Q9BYD1 178 aaKnown RBP12.56□□□□□ -0.4
ATG4B-223ENST00000493618 POLR2J2Q9GZM3 115 aaKnown RBP12.56□□□□□ -0.4
ATG4B-223ENST00000493618 POLR2J3Q9H1A7 115 aaKnown RBP12.56□□□□□ -0.4
ATG4B-223ENST00000493618 MS4A5Q9H3V2 200 aa12.56□□□□□ -0.4
ATG4B-223ENST00000493618 GID8Q9NWU2 228 aa12.56□□□□□ -0.4
ATG4B-223ENST00000493618 TAAR3PQ9P1P4 343 aa12.56□□□□□ -0.4
ATG4B-223ENST00000493618 MED31Q9Y3C7 131 aa12.56□□□□□ -0.4
ATG4B-223ENST00000493618 CAPN7Q9Y6W3 813 aa12.56□□□□□ -0.4
ATG4B-223ENST00000493618 J3KTA2 159 aa12.55□□□□□ -0.4
ATG4B-223ENST00000493618 WNT9BO14905 357 aa12.55□□□□□ -0.4
ATG4B-223ENST00000493618 ENTPD5O75356 428 aa12.55□□□□□ -0.4
ATG4B-223ENST00000493618 IFI30P13284 250 aa12.55□□□□□ -0.4
ATG4B-223ENST00000493618 HNF1AP20823 631 aa12.55□□□□□ -0.4
ATG4B-223ENST00000493618 CCNOP22674 350 aa12.55□□□□□ -0.4
ATG4B-223ENST00000493618 MAGEB1P43366 347 aa12.55□□□□□ -0.4
ATG4B-223ENST00000493618 GLO1Q04760 184 aa12.55□□□□□ -0.4
ATG4B-223ENST00000493618 CD47Q08722 323 aa12.55□□□□□ -0.4
ATG4B-223ENST00000493618 SGCAQ16586 387 aa12.55□□□□□ -0.4
ATG4B-223ENST00000493618 NKPD1Q17RQ9 610 aa12.55□□□□□ -0.4
ATG4B-223ENST00000493618 TBC1D28Q2M2D7 210 aa12.55□□□□□ -0.4
ATG4B-223ENST00000493618 ARMC4Q5T2S8 1044 aa12.55□□□□□ -0.4
ATG4B-223ENST00000493618 VTCN1Q7Z7D3 282 aa12.55□□□□□ -0.4
ATG4B-223ENST00000493618 CLDN22Q8N7P3 220 aa12.55□□□□□ -0.4
ATG4B-223ENST00000493618 LINC01356Q8N9X3 169 aa12.55□□□□□ -0.4
ATG4B-223ENST00000493618 GTF3AQ92664 365 aaKnown RBP12.55□□□□□ -0.4
ATG4B-223ENST00000493618 SEPHS2Q99611 448 aa12.55□□□□□ -0.4
ATG4B-223ENST00000493618 ZNF446Q9NWS9 450 aa12.55□□□□□ -0.4
ATG4B-223ENST00000493618 CMTM6Q9NX76 183 aa12.55□□□□□ -0.4
ATG4B-223ENST00000493618 A4GNTQ9UNA3 340 aa12.55□□□□□ -0.4
ATG4B-223ENST00000493618 UGT2A1Q9Y4X1 527 aa12.55□□□□□ -0.4
ATG4B-223ENST00000493618 IQCMA0A1B0GVH7 501 aa12.54□□□□□ -0.4
ATG4B-223ENST00000493618 ELOVL7A1L3X0 281 aa12.54□□□□□ -0.4
ATG4B-223ENST00000493618 MMP7P09237 267 aaPredicted RBP12.54□□□□□ -0.4
ATG4B-223ENST00000493618 MAKP20794 623 aa12.54□□□□□ -0.4
ATG4B-223ENST00000493618 GPR6P46095 362 aaPredicted RBP12.54□□□□□ -0.4
ATG4B-223ENST00000493618 CDH15P55291 814 aa12.54□□□□□ -0.4
ATG4B-223ENST00000493618 SELENOWP63302 87 aa12.54□□□□□ -0.4
ATG4B-223ENST00000493618 HSF2Q03933 536 aa12.54□□□□□ -0.4
ATG4B-223ENST00000493618 PLP2Q04941 152 aa12.54□□□□□ -0.4
ATG4B-223ENST00000493618 ALG10Q5BKT4 473 aa12.54□□□□□ -0.4
ATG4B-223ENST00000493618 PABPC1L2AQ5JQF8 200 aa12.54□□□□□ -0.4
ATG4B-223ENST00000493618 C10orf128Q5T292 105 aa12.54□□□□□ -0.4
ATG4B-223ENST00000493618 CPEB3Q8NE35 698 aaKnown RBP12.54□□□□□ -0.4
ATG4B-223ENST00000493618 CLDND2Q8NHS1 167 aa12.54□□□□□ -0.4
ATG4B-223ENST00000493618 SYNPRQ8TBG9 265 aa12.54□□□□□ -0.4
ATG4B-223ENST00000493618 RDH5Q92781 318 aa12.54□□□□□ -0.4
ATG4B-223ENST00000493618 HPS1Q92902 700 aa12.54□□□□□ -0.4
ATG4B-223ENST00000493618 PRRC1Q96M27 445 aa12.54□□□□□ -0.4
ATG4B-223ENST00000493618 LPAR2Q9HBW0 351 aa12.54□□□□□ -0.4
ATG4B-223ENST00000493618 CCNB1IP1Q9NPC3 277 aa12.54□□□□□ -0.4
ATG4B-223ENST00000493618 ZNF275Q9NSD4 429 aaPredicted RBP12.54□□□□□ -0.4
ATG4B-223ENST00000493618 SNX13Q9Y5W8 968 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms