RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 RNF111Q6ZNA4 994 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 TPRG1Q6ZUI0 275 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 ZNF367Q7RTV3 350 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 PIWIL4Q7Z3Z4 852 aaKnown RBP3.76□□□□□ -1.81
BRCA1-220ENST00000492859 SLC35F6Q8N357 371 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 Q8N3U1 123 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 DHRSXQ8N5I4 330 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 PARP16Q8N5Y8 322 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 NFAM1Q8NET5 270 aaPredicted RBP3.76□□□□□ -1.81
BRCA1-220ENST00000492859 OR4F6Q8NGB9 312 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 OR5L2Q8NGL0 311 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 OR4P4Q8NGL7 312 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 OR6K2Q8NGY2 324 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 OR6N1Q8NGY5 312 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 OR4L1Q8NH43 312 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 OR4S2Q8NH73 311 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 GNPDA2Q8TDQ7 276 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 CCDC107Q8WV48 283 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 ACOT12Q8WYK0 555 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 BPIFA2Q96DR5 249 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 SMIM19Q96E16 107 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 RAB3CQ96E17 227 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 ZHX1-C8orf76Q96EF9 292 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 CMTM7Q96FZ5 175 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 TIMD4Q96H15 378 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 KCTD7Q96MP8 289 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 GPR78Q96P69 363 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 ABHD14AQ9BUJ0 271 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 CCDC32Q9BV29 185 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 MS4A8Q9BY19 250 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 ALOXE3Q9BYJ1 711 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 TBL1XR1Q9BZK7 514 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 TUBB1Q9H4B7 451 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 ZNF556Q9HAH1 456 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 ZNF334Q9HCZ1 680 aaPredicted RBP3.76□□□□□ -1.81
BRCA1-220ENST00000492859 FGF21Q9NSA1 209 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 DUS2Q9NX74 493 aaKnown RBP3.76□□□□□ -1.81
BRCA1-220ENST00000492859 NPAP1Q9NZP6 1156 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 KLRF1Q9NZS2 232 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 BFARQ9NZS9 450 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 CD84Q9UIB8 345 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 ZNF107Q9UII5 783 aaPredicted RBP3.76□□□□□ -1.81
BRCA1-220ENST00000492859 YARS2Q9Y2Z4 477 aaKnown RBP3.76□□□□□ -1.81
BRCA1-220ENST00000492859 RBM7Q9Y580 266 aaKnown RBP3.76□□□□□ -1.81
BRCA1-220ENST00000492859 PEX16Q9Y5Y5 336 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 TAF6LQ9Y6J9 622 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 PRSS21Q9Y6M0 314 aa3.76□□□□□ -1.81
BRCA1-220ENST00000492859 MROH7Q68CQ1 1323 aa3.75□□□□□ -1.81
BRCA1-220ENST00000492859 KIF21AQ7Z4S6 1674 aa3.75□□□□□ -1.81
BRCA1-220ENST00000492859 CAMSAP2Q08AD1 1489 aa3.75□□□□□ -1.81
BRCA1-220ENST00000492859 CACNA1SQ13698 1873 aa3.75□□□□□ -1.81
BRCA1-220ENST00000492859 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.75□□□□□ -1.81
BRCA1-220ENST00000492859 TGIF2-C20orf24A0A0A6YYL0 155 aa3.75□□□□□ -1.81
BRCA1-220ENST00000492859 ASPDHA6ND91 283 aa3.75□□□□□ -1.81
BRCA1-220ENST00000492859 PPP5D1E7EU14 171 aa3.75□□□□□ -1.81
BRCA1-220ENST00000492859 LMO7DNF2Z398 122 aa3.75□□□□□ -1.81
BRCA1-220ENST00000492859 C15orf65H3BRN8 121 aa3.75□□□□□ -1.81
BRCA1-220ENST00000492859 SLC1A7O00341 560 aa3.75□□□□□ -1.81
BRCA1-220ENST00000492859 OR7A17O14581 309 aa3.75□□□□□ -1.81
BRCA1-220ENST00000492859 CHEK1O14757 476 aa3.75□□□□□ -1.81
BRCA1-220ENST00000492859 PDE6DO43924 150 aa3.75□□□□□ -1.81
BRCA1-220ENST00000492859 DUSP11O75319 330 aaKnown RBP3.75□□□□□ -1.81
BRCA1-220ENST00000492859 ENTPD6O75354 484 aa3.75□□□□□ -1.81
BRCA1-220ENST00000492859 ATP6AP2O75787 350 aa3.75□□□□□ -1.81
BRCA1-220ENST00000492859 OR2B3O76000 313 aa3.75□□□□□ -1.81
BRCA1-220ENST00000492859 IGHG4P01861 327 aa3.75□□□□□ -1.81
BRCA1-220ENST00000492859 MMP1P03956 469 aa3.75□□□□□ -1.81
BRCA1-220ENST00000492859 VTNP04004 478 aa3.75□□□□□ -1.81
BRCA1-220ENST00000492859 TYMSP04818 313 aa3.75□□□□□ -1.81
BRCA1-220ENST00000492859 SERPINA7P05543 415 aa3.75□□□□□ -1.81
BRCA1-220ENST00000492859 OR8U8P0C7N1 319 aa3.75□□□□□ -1.81
BRCA1-220ENST00000492859 EPCAMP16422 314 aa3.75□□□□□ -1.81
BRCA1-220ENST00000492859 RAB6AP20340 208 aa3.75□□□□□ -1.81
BRCA1-220ENST00000492859 NR4A1P22736 598 aa3.75□□□□□ -1.81
BRCA1-220ENST00000492859 GJB2P29033 226 aa3.75□□□□□ -1.81
BRCA1-220ENST00000492859 ADORA2AP29274 412 aa3.75□□□□□ -1.81
BRCA1-220ENST00000492859 ADORA2BP29275 332 aa3.75□□□□□ -1.81
BRCA1-220ENST00000492859 FGF9P31371 208 aaPredicted RBP3.75□□□□□ -1.81
BRCA1-220ENST00000492859 PTGER1P34995 402 aa3.75□□□□□ -1.81
BRCA1-220ENST00000492859 HPCAL1P37235 193 aa3.75□□□□□ -1.81
BRCA1-220ENST00000492859 P2RY1P47900 373 aa3.75□□□□□ -1.81
BRCA1-220ENST00000492859 CRISP1P54107 249 aa3.75□□□□□ -1.81
BRCA1-220ENST00000492859 GEMP55040 296 aa3.75□□□□□ -1.81
BRCA1-220ENST00000492859 BTN3A2P78410 334 aa3.75□□□□□ -1.81
BRCA1-220ENST00000492859 PRR5P85299 388 aa3.75□□□□□ -1.81
BRCA1-220ENST00000492859 PRKCDQ05655 676 aa3.75□□□□□ -1.81
BRCA1-220ENST00000492859 BTN1A1Q13410 526 aa3.75□□□□□ -1.81
BRCA1-220ENST00000492859 C16orf72Q14CZ0 275 aa3.75□□□□□ -1.81
BRCA1-220ENST00000492859 EXOSC7Q15024 291 aaKnown RBP3.75□□□□□ -1.81
BRCA1-220ENST00000492859 PSMD5Q16401 504 aa3.75□□□□□ -1.81
BRCA1-220ENST00000492859 HSD17B12Q53GQ0 312 aa3.75□□□□□ -1.81
BRCA1-220ENST00000492859 RABL3Q5HYI8 236 aa3.75□□□□□ -1.81
BRCA1-220ENST00000492859 ATAD3CQ5T2N8 411 aa3.75□□□□□ -1.81
BRCA1-220ENST00000492859 REP15Q6BDI9 236 aa3.75□□□□□ -1.81
BRCA1-220ENST00000492859 AADACL2Q6P093 401 aa3.75□□□□□ -1.81
BRCA1-220ENST00000492859 ZNF529Q6P280 563 aa3.75□□□□□ -1.81
BRCA1-220ENST00000492859 DLK2Q6UY11 383 aa3.75□□□□□ -1.81
BRCA1-220ENST00000492859 RPTNQ6XPR3 784 aa3.75□□□□□ -1.81
BRCA1-220ENST00000492859 ANKRD33Q7Z3H0 272 aa3.75□□□□□ -1.81
BRCA1-220ENST00000492859 GALNT10Q86SR1 603 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms